Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 9.6e-198 693.3 361 100.0
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.0e-143 513.8 336 82.4
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 3.3e-142 508.8 325 80.9
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 7.5e-142 507.7 336 81.0
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 9.1e-140 500.7 353 77.9
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.0e-138 497.3 331 79.8
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.8e-138 495.4 336 78.9
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 4.2e-137 491.9 334 78.4
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.2e-136 490.3 326 78.8
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 2.1e-136 489.6 316 80.1
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 3.6e-136 488.8 330 78.2
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.4e-135 486.9 346 74.6
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 8.8e-135 484.2 380 71.8
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.2e-134 483.8 334 76.6
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.2e-134 483.8 352 77.6
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 5.7e-134 481.5 332 78.3
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.7e-133 479.9 330 79.1
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.2e-133 479.6 324 79.6
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 4.8e-133 478.4 324 79.0
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.8e-133 478.4 324 79.0
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 8.3e-133 477.6 324 78.7
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 4.1e-132 475.3 332 75.9
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 9.1e-132 474.2 332 76.2
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.2e-131 473.8 334 76.3
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 2.0e-131 473.0 332 75.3
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 3.5e-131 472.2 330 76.1
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 3.5e-131 472.2 334 76.0
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 4.5e-131 471.9 330 76.4
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 5.9e-131 471.5 327 76.8
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.1e-129 467.2 328 74.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 1.5e-129 466.8 329 74.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 1.9e-129 466.5 329 74.8
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.9e-129 466.5 360 72.2
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 3.2e-129 465.7 333 76.0
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.2e-129 465.3 329 74.5
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.7e-128 462.6 331 73.1
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.6e-128 462.2 302 81.1
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 6.1e-128 461.5 330 73.3
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.0e-127 460.7 279 85.7
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.8e-127 459.9 326 73.9
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 2.3e-127 459.5 330 74.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 2.3e-127 459.5 332 73.5
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 4.0e-127 458.8 329 74.2
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.2e-126 457.2 334 72.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.5e-126 456.8 321 73.8
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 3.4e-126 455.7 322 74.5
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 4.4e-126 455.3 329 73.3
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 7.5e-126 454.5 322 73.6
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 9.8e-126 454.1 332 72.6
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.3e-125 453.8 329 73.6
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.3e-125 453.8 259 90.3
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 1.3e-125 453.8 335 73.4
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.8e-125 452.6 334 71.6
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 8.3e-125 451.1 322 75.8
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 2.4e-124 449.5 323 74.6
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 3.1e-124 449.1 303 78.5
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 4.1e-124 448.7 327 73.4
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 5.4e-124 448.4 332 72.9
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 9.2e-124 447.6 311 75.6
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.6e-123 446.8 320 73.8
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 3.5e-123 445.7 332 71.7
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 3.5e-123 445.7 328 73.8
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 7.7e-123 444.5 334 72.8
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.3e-122 443.7 322 73.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.3e-122 443.7 322 73.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 2.3e-122 443.0 328 73.2
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 2.9e-122 442.6 336 72.3
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 2.9e-122 442.6 329 72.0
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 6.6e-122 441.4 292 78.8
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.9e-121 439.9 332 71.7
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 5.6e-121 438.3 271 83.0
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 9.5e-121 437.6 282 79.1
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.2e-120 437.2 329 71.4
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 8.0e-120 434.5 317 73.2
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.3e-119 433.0 273 80.2
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 6.4e-117 424.9 328 70.1
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 5.4e-116 421.8 294 76.2
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.3e-114 416.4 297 75.1
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 3.0e-114 416.0 333 71.8
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.9e-113 413.3 294 75.5
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 7.3e-113 411.4 247 85.0
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 9.5e-113 411.0 377 63.1
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.0e-111 407.5 312 69.2
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.1e-111 406.0 312 68.9
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 9.8e-110 401.0 326 69.3
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.2e-109 399.8 280 76.4
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.9e-109 399.4 335 64.8
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 6.0e-107 391.7 302 70.5
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.7e-106 390.2 242 84.7
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.7e-106 390.2 335 65.7
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 8.6e-106 387.9 466 51.3
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.5e-105 387.1 267 73.0
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 5.6e-105 385.2 471 50.3
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.3e-103 379.8 236 83.5
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 9.8e-102 374.4 271 70.5
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 2.2e-101 373.2 245 79.2
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 3.7e-101 372.5 267 71.2
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 9.2e-100 367.9 324 65.1
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 7.8e-99 364.8 299 67.9
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 3.0e-98 362.8 272 68.0
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 3.1e-95 352.8 291 61.9
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.6e-94 349.7 209 85.6
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 4.3e-89 332.4 243 72.8
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 4.3e-89 332.4 216 77.8
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 6.9e-87 325.1 306 62.7
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.2e-83 314.3 373 54.7
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.9e-81 307.0 340 55.6
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.8e-79 300.4 178 87.1
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.1e-76 291.2 274 54.0
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 2.7e-75 286.6 263 55.5
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 3.4e-70 269.6 187 72.7
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 5.8e-70 268.9 313 50.2
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 7.6e-70 268.5 259 55.6
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 9.3e-68 261.5 219 63.0
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 2.1e-67 260.4 157 84.1
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.8e-66 257.3 210 67.1
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.1e-63 248.1 265 52.5
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 6.0e-59 232.3 129 90.7
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 3.1e-55 219.9 130 88.5
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.6e-54 216.9 136 79.4
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.1e-49 201.4 115 89.6
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.6e-43 181.0 108 84.3
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 6.5e-37 159.1 251 36.7
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.1e-27 127.5 176 42.0
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.3e-26 124.0 80 83.8
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-26 123.2 187 38.5
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 1.3e-24 118.2 90 68.9
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.7e-21 107.8 99 60.6
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 1.1e-12 78.6 66 68.2
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 8.0e-11 72.4 119 46.2
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 4.0e-10 70.1 266 24.4
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 5.7e-09 66.2 36 91.7
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 5.4e-07 59.7 51 58.8


User provided reference genes

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