Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.2e-80 303.1 153 100.0
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 6.1e-61 237.7 144 82.6
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 5.2e-60 234.6 149 83.2
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 5.7e-59 231.1 144 79.9
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 7.5e-59 230.7 150 82.0
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.7e-58 229.6 154 79.2
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 3.7e-58 228.4 150 76.0
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 4.8e-58 228.0 152 75.7
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 4.8e-58 228.0 148 79.7
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 1.1e-57 226.9 144 78.5
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 7.0e-57 224.2 143 79.7
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.2e-56 223.4 149 73.2
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.2e-56 223.4 149 73.2
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 1.6e-56 223.0 148 77.0
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 2.0e-56 222.6 150 79.3
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 2.0e-56 222.6 144 80.6
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 5.0e-55 218.0 180 68.9
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 1.9e-54 216.1 120 90.0
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 3.6e-53 211.8 129 83.7
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 4.7e-53 211.5 150 72.7
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.4e-52 209.9 127 82.7
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.8e-52 209.5 150 74.7
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.8e-52 209.5 149 74.5
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.3e-52 209.1 138 78.3
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 3.0e-52 208.8 150 72.0
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 3.0e-52 208.8 119 88.2
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 5.2e-52 208.0 119 86.6
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 5.2e-52 208.0 150 72.0
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 5.2e-52 208.0 149 73.2
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.5e-51 206.5 139 78.4
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 5.7e-51 204.5 130 80.8
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 7.5e-51 204.1 151 68.9
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 9.8e-51 203.8 148 72.3
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.7e-50 203.0 152 71.7
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 2.8e-50 202.2 139 76.3
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 3.7e-50 201.8 138 76.8
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 4.8e-50 201.4 148 70.3
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 4.8e-50 201.4 148 69.6
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.8e-49 199.5 108 90.7
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.8e-49 199.5 149 71.1
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 2.4e-49 199.1 149 71.8
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 3.1e-49 198.7 150 68.0
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 4.1e-49 198.4 156 66.0
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 9.1e-49 197.2 147 70.7
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.2e-48 196.8 147 70.7
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 1.2e-48 196.8 147 70.7
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 1.2e-48 196.8 147 70.7
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.2e-48 196.8 147 70.7
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.6e-48 196.4 139 72.7
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 2.7e-48 195.7 109 88.1
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 2.7e-48 195.7 147 70.1
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 2.7e-48 195.7 148 70.3
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 2.7e-48 195.7 125 80.0
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 3.5e-48 195.3 107 88.8
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 3.5e-48 195.3 152 65.8
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.0e-47 193.7 119 80.7
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 1.7e-47 193.0 138 73.9
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 2.9e-47 192.2 148 70.3
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 2.9e-47 192.2 135 74.1
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 3.8e-47 191.8 138 72.5
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 3.8e-47 191.8 149 66.4
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 5.0e-47 191.4 123 79.7
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 6.5e-47 191.0 119 79.8
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 6.5e-47 191.0 125 80.0
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 8.5e-47 190.7 119 78.2
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.5e-46 189.9 151 64.2
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 1.9e-46 189.5 148 68.9
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 4.2e-46 188.3 120 80.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 5.5e-46 188.0 141 71.6
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 9.4e-46 187.2 151 63.6
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 6.1e-45 184.5 151 66.2
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.0e-44 182.2 151 65.6
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 8.8e-44 180.6 143 65.7
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 2.8e-42 175.6 152 58.6
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 8.3e-42 174.1 103 82.5
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.4e-41 172.6 150 61.3
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 3.1e-41 172.2 104 80.8
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 4.1e-41 171.8 108 79.6
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 1.6e-40 169.9 151 61.6
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 2.0e-40 169.5 145 64.8
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 4.5e-40 168.3 106 77.4
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 7.7e-40 167.5 129 65.9
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.0e-39 167.2 98 81.6
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.0e-39 167.2 98 81.6
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 3.8e-39 165.2 169 55.6
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 5.0e-39 164.9 134 64.9
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 5.0e-39 164.9 110 73.6
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 5.0e-39 164.9 118 66.9
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 8.6e-39 164.1 107 74.8
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.1e-38 163.7 146 56.8
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.5e-38 162.5 103 81.6
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 2.3e-36 156.0 141 60.3
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 4.4e-35 151.8 100 79.0
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 6.4e-34 147.9 122 63.9
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 8.3e-34 147.5 121 66.1
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 3.9e-31 138.7 86 74.4
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 1.0e-28 130.6 92 66.3
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.3e-22 109.0 100 67.0
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 5.8e-19 98.2 78 66.7
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 3.8e-10 68.9 67 56.7
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 6.4e-10 68.2 101 34.7
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 4.1e-09 65.5 103 35.9
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 5.1e-07 58.5 38 68.4
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 5.1e-07 58.5 38 68.4


User provided reference genes

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