Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 2.5e-72 275.4 144 100.0
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 6.8e-70 267.3 144 94.4
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 9.5e-64 246.9 144 88.9
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.1e-63 245.7 144 86.1
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 4.7e-63 244.6 144 86.1
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.0e-62 243.4 144 91.0
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.8e-62 242.7 144 86.1
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 5.2e-62 241.1 143 86.0
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 8.9e-62 240.4 143 86.0
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 8.9e-62 240.4 143 86.0
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.6e-61 238.8 142 87.3
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 83.4
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 4.4e-61 238.0 146 84.9
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 84.8
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.7e-60 236.1 146 85.6
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.7e-60 236.1 145 84.1
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.2e-60 235.7 144 83.3
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.8e-60 235.3 144 85.4
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 6.3e-60 234.2 145 83.4
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 5.4e-59 231.1 146 83.6
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.7e-57 226.1 145 81.4
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 2.3e-57 225.7 135 86.7
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 2.3e-57 225.7 146 81.5
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.3e-57 225.7 150 78.7
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 2.3e-57 225.7 144 81.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 2.9e-57 225.3 144 81.2
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.9e-57 225.3 145 82.1
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 6.6e-57 224.2 146 82.2
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.6e-57 224.2 142 82.4
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 8.6e-57 223.8 132 89.4
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.1e-56 223.4 180 68.3
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.9e-56 222.6 145 81.4
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.9e-56 222.6 145 83.4
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 80.0
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.5e-56 222.2 146 80.1
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 80.8
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 7.3e-56 220.7 145 80.0
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 9.5e-56 220.3 145 80.0
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.1e-55 219.2 143 81.1
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.8e-55 218.8 144 80.6
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 2.8e-55 218.8 144 80.6
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 79.5
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 8.0e-55 217.2 147 80.3
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 8.0e-55 217.2 148 80.4
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 8.0e-55 217.2 145 80.0
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 8.0e-55 217.2 148 79.1
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 8.0e-55 217.2 145 80.0
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.8e-54 216.1 146 78.1
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.8e-54 216.1 144 79.9
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.0e-54 215.3 146 78.1
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 80.0
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 4.0e-54 214.9 144 79.2
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 4.0e-54 214.9 148 79.1
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 4.0e-54 214.9 146 78.8
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 4.0e-54 214.9 146 78.8
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 4.0e-54 214.9 146 78.1
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 5.2e-54 214.5 135 83.0
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 5.2e-54 214.5 146 82.2
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 6.8e-54 214.2 142 79.6
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 6.8e-54 214.2 159 74.8
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 6.8e-54 214.2 147 78.9
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.2e-53 213.4 134 83.6
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.2e-53 213.4 147 77.6
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.5e-53 213.0 147 78.2
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.5e-53 213.0 142 78.9
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 1.5e-53 213.0 143 77.6
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.0e-53 212.6 147 78.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 2.0e-53 212.6 144 79.2
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 2.6e-53 212.2 147 78.9
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 78.6
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 78.6
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 78.2
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 78.9
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 78.2
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.4e-53 211.8 145 78.6
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 3.4e-53 211.8 146 79.5
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.4e-53 211.5 147 78.9
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 4.4e-53 211.5 147 77.6
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 4.4e-53 211.5 147 78.2
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 4.4e-53 211.5 145 78.6
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.4e-53 211.5 145 78.6
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 5.8e-53 211.1 147 78.2
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 5.8e-53 211.1 143 83.9
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 5.8e-53 211.1 146 76.7
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 5.8e-53 211.1 147 79.6
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 5.8e-53 211.1 141 78.0
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 7.5e-53 210.7 147 77.6
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 7.5e-53 210.7 134 82.1
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 9.8e-53 210.3 147 77.6
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 9.8e-53 210.3 145 77.9
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 9.8e-53 210.3 146 76.7
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-52 209.9 147 77.6
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 1.7e-52 209.5 147 78.2
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.7e-52 209.5 147 77.6
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 3.7e-52 208.4 147 78.2
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.7e-52 208.4 145 77.2
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.9e-52 208.0 147 76.9
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 4.9e-52 208.0 147 76.9
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 6.4e-52 207.6 147 76.2
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 6.4e-52 207.6 147 77.6
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 8.3e-52 207.2 145 76.6
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 8.3e-52 207.2 146 76.7
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 1.1e-51 206.8 145 76.6
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.2
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.2
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.2
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.2
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.2
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.1e-51 206.8 144 80.6
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.8e-51 206.1 147 76.9
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 3.2e-51 205.3 132 81.1
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 5.4e-51 204.5 132 80.3
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 7.0e-51 204.1 145 75.9
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 9.2e-51 203.8 143 79.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 9.2e-51 203.8 145 77.9
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.6e-50 203.0 143 77.6
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 2.0e-50 202.6 141 78.0
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 3.5e-50 201.8 129 82.9
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.0e-49 200.3 145 74.5
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.0e-49 198.7 120 86.7
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.1e-48 196.8 143 77.6
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.1e-48 196.8 138 76.8
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.5e-48 195.7 146 76.7
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 3.3e-48 195.3 145 73.8
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.3e-48 195.3 144 75.0
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.3e-48 195.3 147 76.9
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.3e-48 195.3 147 76.9
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 4.3e-48 194.9 150 73.3
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 7.3e-48 194.1 145 74.5
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.3e-48 194.1 169 66.3
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 76.6
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 76.6
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 76.6
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 8.0e-47 190.7 144 75.7
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.3e-46 189.1 144 72.9
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 2.3e-46 189.1 129 79.1
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 146 74.7
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 8.9e-46 187.2 171 62.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.0e-45 186.0 123 80.5
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 3.4e-45 185.3 102 90.2
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.4e-45 184.9 134 74.6
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 7.5e-45 184.1 144 73.6
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.5e-45 184.1 133 78.9
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 3.2e-43 178.7 145 68.3
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 4.1e-43 178.3 133 77.4
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.6e-42 176.4 95 88.4
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 2.7e-42 175.6 144 70.8
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-41 173.3 133 70.7
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 2.3e-41 172.6 109 82.6
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.3e-41 172.6 116 79.3
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 2.8e-39 165.6 121 76.0
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 1.1e-38 163.7 122 75.4
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.4e-38 163.3 154 64.3
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 3.1e-38 162.2 121 74.4
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.0e-38 161.8 90 87.8
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.2e-37 160.2 141 66.0
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 7.5e-37 157.5 104 81.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.2e-34 150.2 142 61.3
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 4.6e-34 148.3 134 64.9
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 4.6e-34 148.3 98 82.7
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.0e-34 147.9 118 68.6
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.0e-34 147.9 118 68.6
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 3.6e-31 138.7 91 74.7
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 1.5e-29 133.3 134 57.5
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 7.6e-29 131.0 134 56.7
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-27 126.7 125 62.4
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 5.4e-27 124.8 99 71.7
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.2e-26 123.6 104 71.2
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 69 82.6
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.1e-25 118.2 64 87.5
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 6.6e-25 117.9 144 51.4
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 7.6e-21 104.4 132 47.7
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 3.8e-20 102.1 132 47.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 8.4e-20 100.9 91 60.4
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 3.2e-19 99.0 82 70.7
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-18 97.1 78 70.5
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 2.1e-18 96.3 77 71.4
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 1.0e-17 94.0 45 93.3
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 4.3e-16 88.6 83 65.1
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 4.8e-15 85.1 77 67.5
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 7.9e-10 67.8 80 52.5
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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