Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 0.0e+00 8899.6 4501 100.0
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 0.0e+00 7366.9 4847 78.4
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 0.0e+00 7365.8 4847 78.3
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 0.0e+00 7209.4 4839 76.5
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 0.0e+00 7054.5 4868 75.1
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 0.0e+00 6915.1 4802 74.5
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 0.0e+00 6913.5 4592 76.9
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 0.0e+00 6872.3 4851 73.2
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 0.0e+00 6841.5 4825 73.3
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 0.0e+00 6831.1 4902 72.5
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 0.0e+00 6748.7 4847 71.7
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 0.0e+00 6745.2 4848 72.0
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 0.0e+00 6720.9 4741 72.6
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 0.0e+00 6697.5 4848 71.8
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 0.0e+00 6649.7 4847 71.0
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 0.0e+00 6633.9 4848 71.0
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 0.0e+00 6622.3 4733 72.1
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 0.0e+00 6614.6 4843 70.9
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 0.0e+00 6610.4 4849 70.9
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 0.0e+00 6592.7 4849 70.7
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 0.0e+00 6585.0 4851 70.6
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 0.0e+00 6583.0 4845 69.9
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 0.0e+00 6561.5 4859 70.4
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 0.0e+00 6531.8 4847 70.2
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 0.0e+00 6521.0 4851 70.2
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 0.0e+00 6507.2 4853 69.8
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 0.0e+00 6502.2 4845 69.3
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 0.0e+00 6501.4 4851 69.8
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 0.0e+00 6463.2 4851 69.9
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 0.0e+00 6441.3 4843 69.1
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 0.0e+00 6422.8 4851 68.9
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 0.0e+00 6392.4 4855 68.5
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 0.0e+00 6388.1 4852 68.3
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 0.0e+00 6381.6 4855 68.5
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 0.0e+00 6355.4 4770 69.2
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 0.0e+00 6322.3 4863 68.4
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 0.0e+00 6315.3 4844 68.2
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 0.0e+00 6310.3 4846 68.5
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 0.0e+00 6289.1 4832 67.5
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 0.0e+00 6267.6 4845 67.1
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 0.0e+00 6262.9 4887 66.7
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 0.0e+00 6256.4 4851 66.8
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 0.0e+00 6253.7 4851 66.7
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 0.0e+00 6247.5 4843 67.1
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 0.0e+00 6247.5 4843 67.1
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 0.0e+00 6243.3 4831 67.4
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 0.0e+00 6241.8 4832 67.0
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 0.0e+00 6241.0 4860 67.1
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 0.0e+00 6227.5 4833 67.0
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 0.0e+00 6210.9 4849 66.5
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 0.0e+00 6193.2 4849 66.6
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 0.0e+00 6192.1 4834 66.5
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 0.0e+00 6191.7 4850 66.6
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 0.0e+00 6153.5 4852 66.1
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 0.0e+00 6151.6 4853 66.5
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 0.0e+00 6140.8 4845 65.9
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 0.0e+00 6117.7 4842 65.7
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 0.0e+00 6102.7 4862 65.5
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 0.0e+00 6067.6 4872 65.4
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 0.0e+00 6065.0 4850 65.5
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 0.0e+00 6027.2 4860 65.2
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 0.0e+00 5990.2 4856 64.4
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 0.0e+00 5987.9 4854 64.9
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 0.0e+00 5963.6 4834 64.7
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 0.0e+00 5945.9 4812 66.6
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 0.0e+00 5869.7 4852 64.3
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 0.0e+00 5799.2 4849 62.9
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 0.0e+00 5787.6 4855 62.8
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 0.0e+00 5781.1 4852 62.9
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 0.0e+00 5779.1 4853 62.6
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 0.0e+00 5777.6 4856 62.6
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 0.0e+00 5748.3 4859 62.5
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 0.0e+00 5715.6 4849 62.4
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 0.0e+00 5714.4 4854 62.2
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 0.0e+00 5704.4 4855 62.1
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 0.0e+00 5679.8 4880 61.6
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 0.0e+00 5662.4 4855 62.3
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 0.0e+00 5656.6 4650 63.8
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 0.0e+00 5582.7 4781 61.3
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 0.0e+00 5577.3 3878 74.9
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 0.0e+00 5522.2 4781 60.9
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 0.0e+00 5140.9 4853 56.3
Migut.H00584 Erythranthe guttata HOM05D003926 ORTHO05D005273 0.0e+00 5080.4 3848 67.2
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 0.0e+00 4918.2 4857 54.2
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 0.0e+00 4862.0 4886 54.0
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 0.0e+00 4859.7 3716 69.1
Nitab4.5_0001339g0050 Nicotiana tabacum HOM05D003926 ORTHO05D005273 0.0e+00 4378.5 4314 56.2
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 0.0e+00 4103.5 4989 47.5
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 0.0e+00 4084.3 2944 72.5
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 0.0e+00 3888.2 4956 46.7
CDE01G0304 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 0.0e+00 3867.4 3355 60.4
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 0.0e+00 3818.1 4975 45.8
Dinv33869 Davidia involucrata HOM05D003926 ORTHO05D005273 0.0e+00 3799.6 2588 77.9
Gohir.A07G179100 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 3771.1 2992 65.7
vmacro05611 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 0.0e+00 3661.7 2609 71.8
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 0.0e+00 3615.1 4587 46.4
Glyma.08G252600 Glycine max HOM05D003926 ORTHO05D005273 0.0e+00 3560.0 2758 65.4
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 0.0e+00 3373.9 2424 73.6
A05p45150 Brassica napus HOM05D003926 ORTHO05D005273 0.0e+00 3261.9 2894 59.4
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 3157.5 2274 72.6
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 3139.4 2274 72.4
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 0.0e+00 3078.5 2360 68.4
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 0.0e+00 3036.5 2162 74.9
Nitab4.5_0009887g0010 Nicotiana tabacum HOM05D003926 ORTHO05D005273 0.0e+00 2898.2 2439 62.0
BcaC05g30341 Brassica carinata HOM05D003926 ORTHO05D005273 0.0e+00 2778.4 2735 55.7
Glyma.08G252650 Glycine max HOM05D003926 ORTHO05D005273 0.0e+00 2649.0 2027 69.3
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 0.0e+00 2553.1 5922 33.2
arahy.Tifrunner.gnm1.ann1.DT5ZWB Arachis hypogaea HOM05D003926 ORTHO05D005273 0.0e+00 2374.4 2088 59.7
Cpa.g.sc14.238 Carica papaya HOM05D003926 ORTHO05D005273 0.0e+00 2374.4 1718 72.9
SHI25822 Sapria himalayana HOM05D003926 ORTHO05D005273 0.0e+00 2324.3 2187 58.3
PGSC0003DMG401001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 0.0e+00 2317.3 1500 78.9
BcaC05g30340 Brassica carinata HOM05D003926 ORTHO05D005273 0.0e+00 2283.8 1756 67.9
Gohir.A07G178901 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 2218.4 1924 60.6
SHI25820 Sapria himalayana HOM05D003926 ORTHO05D005273 0.0e+00 2165.6 2452 49.3
HPP92_020589 Vanilla planifolia HOM05D003926 ORTHO05D005273 0.0e+00 2150.9 1882 61.6
A05p45140 Brassica napus HOM05D003926 ORTHO05D005273 0.0e+00 2137.8 1656 67.8
HPP92_020588 Vanilla planifolia HOM05D003926 ORTHO05D005273 0.0e+00 2052.3 2369 47.8
AagrBONN_evm.TU.Sc2ySwM_344.3761 Anthoceros agrestis HOM05D003926 ORTHO05D005273 0.0e+00 1784.6 2918 39.5
Rhsim05G0129500 Rhododendron simsii HOM05D003926 ORTHO05D005273 0.0e+00 1769.6 1730 57.7
FAN09G1503 Fragaria x ananassa HOM05D003926 ORTHO05D005273 0.0e+00 1570.1 1437 57.0
Psat4g186360 Pisum sativum HOM05D003926 ORTHO05D005273 0.0e+00 1108.6 832 68.6
Peaxi162Scf00020g02344 Petunia axillaris HOM05D003926 ORTHO05D005273 8.7e-248 863.2 972 49.2
Rhsim05G0129300 Rhododendron simsii HOM05D003926 ORTHO05D005273 1.5e-236 825.9 535 79.8
Atru.chr12.1304 Acer truncatum HOM05D003926 ORTHO05D005273 7.4e-231 807.0 699 63.8
Psat4g179640 Pisum sativum HOM05D003926 ORTHO05D005273 2.0e-223 782.3 589 68.4
CDE01G0480 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 4.1e-213 748.0 760 55.9
SMO199G0087 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 2.1e-201 709.1 1034 43.9
Sabra16G0314500 Salix brachista HOM05D004145 ORTHO05D004879 8.0e-201 707.2 759 56.4
SMO361G0392 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 1.7e-198 699.5 1053 42.9
vmacro11260 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 1.9e-173 616.3 389 79.4
MCO11G572 Micromonas commoda HOM05D003926 ORTHO05D005273 8.3e-166 590.9 4183 22.2
Migut.H00583 Erythranthe guttata HOM05D003926 ORTHO05D005273 5.4e-141 508.4 361 71.7
Sabra16G0314400 Salix brachista HOM05D004145 ORTHO05D004879 1.2e-135 490.7 745 44.7
Actinidia36271 Actinidia chinensis HOM05D003926 ORTHO05D005273 2.5e-122 446.4 261 85.8
Psat7g201760 Pisum sativum HOM05D003926 ORTHO05D005273 2.4e-96 360.1 267 69.7
CSS0003920 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.7e-84 320.1 192 82.8
CSS0037899 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 3.4e-82 313.2 192 82.8
CSS0007096 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 8.6e-78 298.5 192 79.7
CSS0009757 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 7.2e-77 295.4 192 77.1
Psat1g100800 Pisum sativum HOM05D003926 ORTHO05D005273 6.8e-75 288.9 220 66.8
CSS0026086 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 3.2e-72 280.0 193 76.2
Psat7g201680 Pisum sativum HOM05D003926 ORTHO05D005273 1.1e-69 271.6 267 56.9
CDE01G0511 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 4.4e-66 259.6 424 37.0
A05p29520 Brassica napus HOM05D003926 ORTHO05D005273 4.6e-63 249.6 641 31.4
Psat6g077960 Pisum sativum HOM05D003926 ORTHO05D005273 4.6e-63 249.6 185 69.2
Oeu047260.2 Olea europaea HOM05D003926 ORTHO05D005273 1.5e-58 234.6 158 77.8
Psat3g106080 Pisum sativum HOM05D003926 ORTHO05D005273 4.4e-50 206.5 135 77.0
Psat2g086480 Pisum sativum HOM05D003926 ORTHO05D005273 2.6e-42 180.6 114 76.3
Psat4g170760 Pisum sativum HOM05D003926 ORTHO05D005273 2.4e-40 174.1 106 79.2
Actinidia36270 Actinidia chinensis HOM05D003926 ORTHO05D038129 4.0e-35 156.8 285 38.9
Psat2g110320 Pisum sativum HOM05D003492 ORTHO05D005115 1.7e-33 151.4 137 64.2
A05p29570 Brassica napus HOM05D003926 ORTHO05D010327 8.4e-33 149.1 295 37.3
Actinidia14026 Actinidia chinensis HOM05D003926 ORTHO05D018213 3.3e-29 137.1 118 63.6
VMungo1383G2275 Vigna mungo HOM05D003926 ORTHO05D005273 1.5e-26 128.3 110 66.4
Psat5g059720 Pisum sativum HOM05D000434 ORTHO05D007220 4.5e-26 126.7 192 43.2
CAN.G8.6 Capsicum annuum HOM05D003926 ORTHO05D010611 1.4e-24 121.7 223 35.9
Nn1g06304 Nelumbo nucifera HOM05D003926 ORTHO05D018213 6.0e-23 116.3 117 54.7
Cpa.g.sc3603.1 Carica papaya HOM05D003926 ORTHO05D018213 3.9e-22 113.6 120 58.3
Eucgr.I02066 Eucalyptus grandis HOM05D003926 ORTHO05D018213 8.7e-22 112.5 118 54.2
CDE01G0142 Ceratophyllum demersum HOM05D003926 ORTHO05D018213 1.1e-21 112.1 139 44.6
Dinv36991 Davidia involucrata HOM05D003926 ORTHO05D038129 1.6e-20 108.2 57 96.5
arahy.Tifrunner.gnm1.ann1.8KUK4W Arachis hypogaea HOM05D003926 ORTHO05D005273 1.1e-19 105.5 293 31.4
Rhsim10G0100000 Rhododendron simsii HOM05D003926 ORTHO05D005273 6.9e-19 102.8 98 62.2
QL10p058201 Quercus lobata HOM05D001813 ORTHO05D008124 3.8e-17 97.1 144 45.8
Sp7g04320 Schrenkiella parvula HOM05D003926 ORTHO05D005273 5.5e-16 93.2 77 57.1
GSVIVG01005908001 Vitis vinifera HOM05D003926 ORTHO05D005273 4.6e-15 90.1 58 75.9
COL.COLO4_10661 Corchorus olitorius HOM05D003926 ORTHO05D018213 5.1e-14 86.7 120 44.2
Psat7g160960 Pisum sativum HOM05D001399 ORTHO05D002785 3.7e-12 80.5 82 52.4
Psat4g018040 Pisum sativum HOM05D003926 ORTHO05D005273 8.2e-12 79.3 116 41.4
Psat3g105800 Pisum sativum HOM05D000129 ORTHO05D007829 2.4e-11 77.8 93 47.3
Psat3g091240 Pisum sativum HOM05D000942 ORTHO05D000918 6.9e-11 76.3 75 57.3
Psat7g240480 Pisum sativum HOM05D000029 ORTHO05D037355 7.6e-10 72.8 50 68.0
Psat3g160120 Pisum sativum HOM05D003926 ORTHO05D005273 2.9e-09 70.9 60 53.3
CDE02G3037 Ceratophyllum demersum HOM05D003926 ORTHO05D018213 5.0e-09 70.1 81 48.1
Pp3c22_5030 Physcomitrium patens HOM05D000005 ORTHO05D000239 7.2e-08 66.2 101 35.6
Psat2g102800 Pisum sativum HOM05D038693 ORTHO05D320111 1.2e-07 65.5 138 34.8
Psat1g150120 Pisum sativum HOM05D003313 ORTHO05D004217 7.9e-07 62.8 37 73.0
SHI25819 Sapria himalayana HOM05D000105 ORTHO05D000023 2.3e-06 61.2 110 34.5
BcaC05g29898 Brassica carinata HOM05D003926 ORTHO05D005273 3.9e-06 60.5 89 43.8
Pp3c10_21693 Physcomitrium patens HOM05D000005 ORTHO05D000239 3.9e-06 60.5 103 35.9
Pp3c10_21680 Physcomitrium patens HOM05D000005 ORTHO05D000239 5.1e-06 60.1 65 40.0


User provided reference genes

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