Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34871 Davidia involucrata HOM05D002267 ORTHO05D005902 5.9e-291 1003.4 493 100.0
Actinidia36296 Actinidia chinensis HOM05D002267 ORTHO05D005902 1.8e-263 912.1 496 89.1
Cfa007986 Carpinus fangiana HOM05D002267 ORTHO05D005902 2.4e-260 901.7 491 87.4
Haze_14088 Corylus avellana HOM05D002267 ORTHO05D005902 3.0e-258 894.8 492 87.0
CiPaw.04G004900 Carya illinoinensis HOM05D002267 ORTHO05D005902 1.6e-256 889.0 493 87.0
QL02p053833 Quercus lobata HOM05D002267 ORTHO05D005902 3.6e-256 887.9 487 87.5
Thecc.07G119800 Theobroma cacao HOM05D002267 ORTHO05D005902 1.2e-254 882.9 493 86.8
Cpa.g.sc652.3 Carica papaya HOM05D002267 ORTHO05D005902 1.5e-254 882.5 493 86.6
vmacro05590 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 2.0e-254 882.1 494 87.0
DCAR_007527 Daucus carota HOM05D002267 ORTHO05D005902 2.6e-254 881.7 493 85.8
Ciclev10011558m.g Citrus clementina HOM05D002267 ORTHO05D005902 4.4e-254 880.9 487 87.5
FAN14G5533 Fragaria x ananassa HOM05D002267 ORTHO05D005902 6.4e-253 877.1 493 86.0
FvH4_6g45710 Fragaria vesca HOM05D002267 ORTHO05D005902 8.3e-253 876.7 493 86.2
CsaV3_5G038940 Cucumis sativus L. HOM05D002267 ORTHO05D005902 2.4e-252 875.2 494 86.4
ClCG11G005190 Citrullus lanatus HOM05D002267 ORTHO05D005902 3.2e-252 874.8 494 86.2
TAR629G0265 Trochodendron aralioides HOM05D002267 ORTHO05D005902 3.2e-252 874.8 494 86.0
COL.COLO4_17522 Corchorus olitorius HOM05D002267 ORTHO05D005902 7.1e-252 873.6 489 86.1
FAN09G4431 Fragaria x ananassa HOM05D002267 ORTHO05D005902 9.2e-252 873.2 493 85.6
Duzib213G0616 Durio zibethinus HOM05D002267 ORTHO05D005902 2.1e-251 872.1 488 86.5
Oeu049334.1 Olea europaea HOM05D002267 ORTHO05D005902 3.5e-251 871.3 495 86.1
Potri.004G106200 Populus trichocarpa HOM05D002267 ORTHO05D005902 3.5e-251 871.3 493 85.8
Sed0022523 Sechium edule HOM05D002267 ORTHO05D005902 6.0e-251 870.5 494 84.8
FAN26G1557 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.3e-250 869.4 493 85.4
Gorai.002G053200 Gossypium raimondii HOM05D002267 ORTHO05D005902 1.3e-250 869.4 488 86.1
Solyc06g005370.3 Solanum lycopersicum HOM05D002267 ORTHO05D005902 1.7e-250 869.0 493 86.0
PGSC0003DMG400003469 Solanum tuberosum HOM05D002267 ORTHO05D005902 2.3e-250 868.6 493 85.8
MD17G1071600 Malus domestica HOM05D002267 ORTHO05D005902 3.0e-250 868.2 493 85.4
Atru.chr1.1114 Acer truncatum HOM05D002267 ORTHO05D005902 3.9e-250 867.8 489 86.5
Manes.02G064400 Manihot esculenta HOM05D002267 ORTHO05D005902 3.9e-250 867.8 492 85.0
Nitab4.5_0011661g0010 Nicotiana tabacum HOM05D002267 ORTHO05D005902 5.1e-250 867.5 492 85.8
Potri.017G109500 Populus trichocarpa HOM05D002267 ORTHO05D005902 5.1e-250 867.5 493 85.4
CANSAT64G2636 Cannabis sativa HOM05D002267 ORTHO05D005902 1.5e-249 865.9 493 85.4
Gohir.A01G052800 Gossypium hirsutum HOM05D002267 ORTHO05D005902 1.9e-249 865.5 488 85.7
Gohir.D01G042400 Gossypium hirsutum HOM05D002267 ORTHO05D005902 1.9e-249 865.5 488 85.7
Gohir.D13G154300 Gossypium hirsutum HOM05D002267 ORTHO05D005902 1.9e-249 865.5 488 85.5
Lj2A1079T37 Lonicera japonica HOM05D002267 ORTHO05D005902 2.5e-249 865.1 491 85.5
Hund16106 Selenicereus undatus HOM05D002267 ORTHO05D005902 3.3e-249 864.8 490 85.1
Sabra04G0076200 Salix brachista HOM05D002267 ORTHO05D005902 4.3e-249 864.4 527 81.2
Gorai.013G174300 Gossypium raimondii HOM05D002267 ORTHO05D005902 5.6e-249 864.0 488 85.5
Sopen06g001330 Solanum pennellii HOM05D002267 ORTHO05D005902 7.3e-249 863.6 493 85.4
FAN23G1730 Fragaria x ananassa HOM05D002267 ORTHO05D005902 9.5e-249 863.2 493 85.4
TWI34G0765 Tripterygium wilfordii HOM05D002267 ORTHO05D005902 1.6e-248 862.4 493 85.2
MELO3C022075.2 Cucumis melo HOM05D002267 ORTHO05D005902 3.6e-248 861.3 490 85.3
Gohir.A13G150000 Gossypium hirsutum HOM05D002267 ORTHO05D005902 3.6e-248 861.3 488 85.2
RcHm_v2.0_Chr2g0163861 Rosa chinensis HOM05D002267 ORTHO05D005902 3.6e-248 861.3 492 85.6
Aqoxy3G03816 Aquilegia oxysepala HOM05D002267 ORTHO05D005902 4.7e-248 860.9 492 84.6
Cc03_g12570 Coffea canephora HOM05D002267 ORTHO05D005902 4.7e-248 860.9 494 85.2
Lalb_Chr04g0258191 Lupinus albus HOM05D002267 ORTHO05D005902 3.1e-247 858.2 492 85.4
CAN.G185.18 Capsicum annuum HOM05D002267 ORTHO05D005902 1.5e-246 855.9 492 84.6
Medtr7g019260 Medicago truncatula HOM05D002267 ORTHO05D005902 2.0e-246 855.5 487 86.4
AUR62014559 Chenopodium quinoa HOM05D002267 ORTHO05D005902 2.6e-246 855.1 493 83.4
Glyma.18G279400 Glycine max HOM05D002267 ORTHO05D005902 2.9e-245 851.7 492 84.8
Peaxi162Scf00465g00103 Petunia axillaris HOM05D002267 ORTHO05D005902 3.8e-245 851.3 503 82.7
PGR042G2823 Punica granatum HOM05D002267 ORTHO05D005902 4.9e-245 850.9 491 83.3
Lj1g0004668 Lotus japonicus HOM05D002267 ORTHO05D005902 6.4e-245 850.5 490 84.5
AUR62008939 Chenopodium quinoa HOM05D002267 ORTHO05D005902 8.4e-245 850.1 493 83.0
Eucgr.J01450 Eucalyptus grandis HOM05D002267 ORTHO05D005902 1.4e-244 849.4 493 84.4
EL10Ac2g04655 Beta vulgaris HOM05D002267 ORTHO05D005902 1.9e-244 849.0 494 83.6
Lalb_Chr17g0336641 Lupinus albus HOM05D002267 ORTHO05D005902 2.4e-244 848.6 486 85.2
Lsat_1_v5_gn_2_86320 Lactuca sativa HOM05D002267 ORTHO05D005902 7.1e-244 847.0 495 83.0
Nitab4.5_0002077g0130 Nicotiana tabacum HOM05D002267 ORTHO05D005902 9.2e-244 846.7 507 82.2
PSO675G5323 Papaver somniferum HOM05D002267 ORTHO05D005902 1.6e-243 845.9 491 81.9
Hund16105 Selenicereus undatus HOM05D002267 ORTHO05D005902 1.6e-243 845.9 528 79.4
arahy.Tifrunner.gnm1.ann1.D1YG1E Arachis hypogaea HOM05D002267 ORTHO05D005902 2.7e-243 845.1 492 83.5
arahy.Tifrunner.gnm1.ann1.Y9SFAF Arachis hypogaea HOM05D002267 ORTHO05D005902 2.7e-243 845.1 492 83.3
HanXRQChr17g0559871 Helianthus annuus HOM05D002267 ORTHO05D005902 2.7e-243 845.1 492 83.3
Psat3g192200 Pisum sativum HOM05D002267 ORTHO05D005902 2.7e-243 845.1 485 86.4
SalBow1G1113 Salvia bowleyana HOM05D002267 ORTHO05D005902 4.6e-243 844.3 493 83.0
PSO541G0287 Papaver somniferum HOM05D002267 ORTHO05D005902 6.0e-243 844.0 491 81.9
Ca_06721_v3 Cicer arietinum L. HOM05D002267 ORTHO05D005902 3.0e-242 841.6 486 85.6
CARHR260400 Cardamine hirsuta HOM05D002267 ORTHO05D005902 6.6e-242 840.5 486 82.7
MSTRG.15422 Avicennia marina HOM05D002267 ORTHO05D005902 1.5e-241 839.3 494 82.8
VMungo1383G0144 Vigna mungo HOM05D002267 ORTHO05D005902 3.3e-241 838.2 492 82.9
Migut.K00870 Erythranthe guttata HOM05D002267 ORTHO05D005902 2.8e-240 835.1 491 83.7
Aa31LG2G3660 Aethionema arabicum HOM05D002267 ORTHO05D005902 1.1e-239 833.2 498 81.1
A06p39620 Brassica napus HOM05D002267 ORTHO05D005902 4.0e-239 831.2 490 82.2
BraA06t26877Z Brassica rapa HOM05D002267 ORTHO05D005902 4.0e-239 831.2 490 82.2
Thhalv10004074m.g Eutrema salsugineum HOM05D002267 ORTHO05D005902 5.2e-239 830.9 487 82.5
BcaB07g30054 Brassica carinata HOM05D002267 ORTHO05D005902 6.9e-239 830.5 487 81.7
BolC2t11669H Brassica oleracea HOM05D002267 ORTHO05D005902 6.9e-239 830.5 486 81.7
ECA238G0812 Erigeron canadensis HOM05D002267 ORTHO05D005902 9.0e-239 830.1 479 83.7
MBI14_g41042_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 9.0e-239 830.1 491 82.5
Ah.10g037400 Amaranthus hybridus HOM05D002267 ORTHO05D005902 2.6e-238 828.6 474 83.8
BolC7t44387H Brassica oleracea HOM05D002267 ORTHO05D005902 2.6e-238 828.6 487 83.0
A02p37120 Brassica napus HOM05D002267 ORTHO05D005902 3.4e-238 828.2 486 81.7
AT3G30841 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 4.4e-238 827.8 485 81.9
Phvul.008G021600 Phaseolus vulgaris HOM05D002267 ORTHO05D005902 5.8e-238 827.4 492 82.3
BcaC06g33731 Brassica carinata HOM05D002267 ORTHO05D005902 7.6e-238 827.0 487 82.5
Carub.0006s2794 Capsella rubella HOM05D002267 ORTHO05D005902 7.6e-238 827.0 491 81.1
SGA_v2.0_scaffold62G21549 Striga asiatica HOM05D002267 ORTHO05D005902 9.9e-238 826.6 496 80.8
AL5G20480 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 1.3e-237 826.2 487 82.1
THA.LOC104805546 Tarenaya hassleriana HOM05D002267 ORTHO05D005902 1.7e-237 825.9 486 82.1
AT4G09520 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 6.4e-237 823.9 490 81.4
C07p38670 Brassica napus HOM05D002267 ORTHO05D005902 8.4e-237 823.5 487 82.3
Sc14g0003340 Simmondsia chinensis HOM05D002267 ORTHO05D005902 8.4e-237 823.5 493 80.7
Dinv33904 Davidia involucrata HOM05D002267 ORTHO05D005902 1.4e-236 822.8 436 92.2
AL6G43080 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 1.9e-236 822.4 486 81.5
BraA02t08698Z Brassica rapa HOM05D002267 ORTHO05D005902 5.4e-236 820.8 494 80.4
C02p56120 Brassica napus HOM05D002267 ORTHO05D005902 1.6e-235 819.3 488 80.9
HPP92_013287 Vanilla planifolia HOM05D002267 ORTHO05D005902 5.6e-233 810.8 494 80.4
ATR0824G083 Amborella trichopoda HOM05D002267 ORTHO05D005902 1.2e-230 803.1 483 80.3
FvH4_5g30870 Fragaria vesca HOM05D002267 ORTHO05D005902 6.7e-226 787.3 441 86.6
Zm00001eb137710 Zea mays HOM05D002267 ORTHO05D005902 9.6e-225 783.5 515 76.1
CDE04G2341 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 1.5e-222 776.2 482 77.8
CDE02G3890 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 1.7e-221 772.7 484 77.3
BcaB07g30055 Brassica carinata HOM05D002267 ORTHO05D005902 1.9e-220 769.2 431 84.2
HanXRQChr07g0200151 Helianthus annuus HOM05D002267 ORTHO05D005902 8.7e-218 760.4 440 83.6
SEGI_04709 Sequoiadendron giganteum HOM05D002267 ORTHO05D005902 5.6e-217 757.7 492 75.4
GSVIVG01008609001 Vitis vinifera HOM05D002267 ORTHO05D005902 1.8e-215 752.7 439 85.0
Sp2g18250 Schrenkiella parvula HOM05D002267 ORTHO05D005902 5.3e-215 751.1 438 82.4
Mapoly0028s0072 Marchantia polymorpha HOM05D002267 ORTHO05D005902 1.3e-210 736.5 489 73.2
Os12g0536000 Oryza sativa ssp. japonica HOM05D002267 ORTHO05D005902 1.1e-207 726.9 442 81.7
TPR.G3251 Trifolium pratense HOM05D002267 ORTHO05D005902 1.5e-201 706.4 383 89.8
SMO239G0110 Selaginella moellendorffii HOM05D002267 ORTHO05D005902 2.5e-201 705.7 482 72.6
Pp3c1_4540 Physcomitrium patens HOM05D002267 ORTHO05D005902 2.8e-200 702.2 481 70.3
CSS0025473 Camellia sinensis var. sinensis HOM05D002267 ORTHO05D005902 1.2e-195 686.8 381 87.9
Nn4g23627 Nelumbo nucifera HOM05D002267 ORTHO05D005902 1.0e-194 683.7 493 71.2
unitig_748.g7015 Utricularia gibba HOM05D002267 ORTHO05D005902 1.4e-191 673.3 402 80.6
MBI14_g39140_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 6.5e-189 664.5 487 70.6
FAN05G0821 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.6e-187 659.8 383 84.9
MBI14_g13654_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 8.8e-186 654.1 481 70.7
Psat0s4662g0040 Pisum sativum HOM05D002267 ORTHO05D005902 1.5e-180 636.7 491 68.8
CBR_g48938 Chara braunii HOM05D002267 ORTHO05D005902 8.0e-179 630.9 508 62.6
RcHm_v2.0_Chr5g0053071 Rosa chinensis HOM05D002267 ORTHO05D005902 1.1e-175 620.5 391 79.8
Prupe.3G243300 Prunus persica HOM05D002267 ORTHO05D005902 3.4e-169 599.0 345 85.2
vmacro23424 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 2.4e-167 592.8 463 68.9
Sabra17G0091700 Salix brachista HOM05D002267 ORTHO05D008106 8.6e-165 584.3 382 76.2
Cre12.g527400 Chlamydomonas reinhardtii HOM05D002267 ORTHO05D005902 3.9e-149 532.3 533 51.0
FAN18G0049 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.6e-139 500.4 267 89.9
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 9.0e-122 441.4 460 51.7
HanXRQChr03g0070911 Helianthus annuus HOM05D002267 ORTHO05D005902 7.8e-118 428.3 245 83.7
FAN13G3322 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.5e-113 414.1 228 88.2
Zm00001eb410550 Zea mays HOM05D002267 ORTHO05D005902 3.8e-112 409.5 240 82.1
BcaC03g17613 Brassica carinata HOM05D002267 ORTHO05D005902 1.4e-111 407.5 251 76.9
HanXRQChr03g0070931 Helianthus annuus HOM05D002267 ORTHO05D005902 1.2e-110 404.4 301 69.1
AagrBONN_evm.TU.Sc2ySwM_228.1779 Anthoceros agrestis HOM05D002267 ORTHO05D005902 4.0e-106 389.4 238 77.7
MBI14_g42567_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 2.0e-105 387.1 477 48.0
AagrBONN_evm.TU.Sc2ySwM_362.1960 Anthoceros agrestis HOM05D002267 ORTHO05D005902 9.9e-105 384.8 433 50.3
FAN02G0256 Fragaria x ananassa HOM05D002267 ORTHO05D005902 8.2e-99 365.2 310 63.5
HPP92_013297 Vanilla planifolia HOM05D002267 ORTHO05D005902 1.1e-98 364.8 237 75.5
MD09G1080600 Malus domestica HOM05D002267 ORTHO05D005902 9.0e-98 361.7 303 66.0
SHI33593 Sapria himalayana HOM05D002267 ORTHO05D005902 2.2e-91 340.5 234 70.5
Duzib177G0042 Durio zibethinus HOM05D002267 ORTHO05D005902 8.8e-77 292.0 249 63.1
TPR.G11470 Trifolium pratense HOM05D002267 ORTHO05D005902 3.8e-64 250.0 158 79.7
TAR374G1196 Trochodendron aralioides HOM05D002267 ORTHO05D005902 2.8e-59 233.8 259 52.1
Oeu025125.1 Olea europaea HOM05D002267 ORTHO05D005902 7.7e-57 225.7 147 74.1
BcaC06g30839 Brassica carinata HOM05D002267 ORTHO05D005902 4.4e-52 209.9 301 44.5
CARHR060050 Cardamine hirsuta HOM05D002267 ORTHO05D005902 4.2e-47 193.4 143 65.0
HanXRQChr17g0560661 Helianthus annuus HOM05D002267 ORTHO05D027489 6.1e-46 189.5 103 83.5
BcaB07g30056 Brassica carinata HOM05D002267 ORTHO05D027489 5.7e-44 183.0 96 86.5
HPP92_013296 Vanilla planifolia HOM05D002267 ORTHO05D005902 5.7e-44 183.0 151 66.2
MD09G1080700 Malus domestica HOM05D002267 ORTHO05D005902 7.5e-44 182.6 119 74.8
MBI14_g30826_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D027489 1.1e-42 178.7 100 86.0
Sed0003994 Sechium edule HOM05D002267 ORTHO05D007330 2.5e-39 167.5 147 59.9
MBI14_g13653_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D035901 4.1e-34 150.2 159 50.9
GSVIVG01036480001 Vitis vinifera HOM05D002267 ORTHO05D005902 8.6e-32 142.5 75 90.7
Glyma.20G047400 Glycine max HOM05D002267 ORTHO05D029252 5.2e-29 133.3 85 76.5
Duzib168G0178 Durio zibethinus HOM05D002267 ORTHO05D029252 4.4e-28 130.2 79 77.2
FAN18G1196 Fragaria x ananassa HOM05D002267 ORTHO05D035901 5.8e-20 103.2 73 69.9
Glyma.04G110800 Glycine max HOM05D002267 ORTHO05D029252 2.4e-18 97.8 93 55.9
CAN.G464.25 Capsicum annuum HOM05D002267 ORTHO05D020089 6.2e-14 83.2 61 73.8
RcHm_v2.0_Chr5g0053081 Rosa chinensis HOM05D002267 ORTHO05D035901 4.9e-11 73.6 46 69.6
Glyma.U031218 Glycine max HOM05D002267 ORTHO05D029252 1.1e-10 72.4 35 88.6
BcaB04g17555 Brassica carinata HOM05D002267 ORTHO05D092878 4.2e-10 70.5 51 68.6
Nn5g27547 Nelumbo nucifera HOM05D002267 ORTHO05D027489 8.7e-08 62.8 30 90.0
MELO3C034926.2 Cucumis melo HOM05D002267 ORTHO05D001928 4.3e-07 60.5 38 78.9


User provided reference genes

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