Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 2.1e-152 542.3 280 100.0
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.3e-122 442.6 277 81.9
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 3.8e-117 425.2 280 76.1
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.7e-107 392.5 275 72.4
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 3.0e-106 389.0 266 74.1
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.9e-105 386.3 277 70.8
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.3e-104 383.6 277 66.4
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.3e-104 383.6 266 73.3
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.4e-103 380.2 278 69.4
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 3.1e-103 379.0 257 74.3
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 2.1e-99 366.3 268 69.8
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 3.5e-99 365.5 275 67.6
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.2e-96 356.3 280 65.7
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 1.8e-95 353.2 276 67.0
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 9.0e-95 350.9 280 65.0
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 4.5e-94 348.6 274 63.5
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 7.7e-94 347.8 266 64.3
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 3.8e-93 345.5 265 65.3
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 1.1e-92 344.0 263 68.8
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 1.9e-92 343.2 264 70.5
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 3.2e-92 342.4 268 64.6
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 5.5e-92 341.7 269 66.5
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 2.7e-91 339.3 269 66.9
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.3e-90 336.3 227 75.8
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 3.9e-90 335.5 260 68.8
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 3.9e-90 335.5 270 61.5
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 6.7e-90 334.7 270 61.9
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 6.7e-90 334.7 247 69.2
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.5e-89 333.6 274 63.5
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.5e-89 333.6 270 62.2
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.5e-89 333.6 269 60.6
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 2.5e-89 332.8 268 60.4
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.4e-87 327.0 295 58.3
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.8e-87 326.6 278 62.2
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 6.9e-87 324.7 277 62.5
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.5e-86 323.6 277 61.7
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 7.9e-83 311.2 264 61.7
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 1.1e-81 307.4 277 59.6
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.1e-81 307.4 277 59.2
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 3.3e-81 305.8 274 57.3
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.7e-81 305.1 256 62.9
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 5.7e-81 305.1 276 56.2
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.3e-80 303.9 278 60.1
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.3e-80 303.9 277 58.1
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.4e-79 300.4 265 56.6
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.4e-79 300.4 277 57.8
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 4.1e-79 298.9 278 58.3
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 7.7e-78 294.7 277 57.4
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.0e-77 294.3 275 56.4
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 1.1e-76 290.8 263 57.4
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 3.2e-76 289.3 273 57.1
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 5.5e-76 288.5 274 57.3
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 5.5e-76 288.5 217 68.7
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 2.1e-75 286.6 272 56.2
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 2.7e-75 286.2 268 55.6
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 4.7e-75 285.4 208 71.6
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 1.4e-74 283.9 268 56.0
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.4e-74 283.9 274 52.6
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 3.0e-74 282.7 268 56.0
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 3.9e-74 282.3 272 57.7
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.3e-72 277.3 268 55.6
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 2.8e-72 276.2 278 52.9
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.7e-72 275.8 275 52.0
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 3.7e-72 275.8 262 54.6
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 3.7e-72 275.8 260 57.3
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 6.3e-72 275.0 272 55.1
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 8.2e-72 274.6 273 52.0
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 5.3e-71 271.9 270 55.9
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 7.0e-71 271.6 272 51.8
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 7.0e-71 271.6 275 51.3
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 7.0e-71 271.6 293 51.9
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.0e-69 267.7 190 71.1
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.1e-68 264.2 267 53.6
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 1.9e-68 263.5 268 53.4
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 7.2e-68 261.5 255 55.7
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 4.7e-67 258.8 256 55.9
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.2e-66 255.4 285 48.1
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 3.7e-64 249.2 222 58.1
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 3.7e-64 249.2 263 49.4
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.1e-63 247.7 213 61.0
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 3.5e-62 242.7 248 51.6
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.3e-61 240.7 223 59.6
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.7e-61 240.4 268 48.9
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.5e-60 236.5 231 53.7
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.5e-60 235.3 229 54.1
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 9.4e-60 234.6 225 56.0
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 4.0e-58 229.2 270 50.0
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 9.8e-57 224.6 256 48.8
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 4.9e-56 222.2 260 45.8
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 7.7e-54 214.9 258 46.5
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 1.4e-50 204.1 185 57.8
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.7e-48 196.1 170 59.4
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.1e-47 194.5 175 57.1
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 3.9e-45 186.0 177 54.2
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 4.9e-40 169.1 141 63.8
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.5e-25 120.9 85 76.5
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 2.6e-25 120.2 109 55.0
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 1.1e-15 88.2 255 31.8
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.6e-14 82.8 59 64.4
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.0e-13 81.6 59 64.4
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.0e-10 69.7 59 59.3
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 1.2e-09 68.2 89 50.6
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-09 67.8 52 61.5
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 2.2e-08 63.9 43 62.8
MCO04G533 Micromonas commoda HOM05D007546 ORTHO05D009542 2.2e-08 63.9 256 26.2
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 2.1e-06 57.4 64 48.4


User provided reference genes

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