Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33591 Davidia involucrata HOM05D006373 ORTHO05D008145 4.4e-43 177.6 89 100.0
Dinv32419 Davidia involucrata HOM05D006373 ORTHO05D008145 4.4e-11 71.2 36 91.7
Lj7A521G13 Lonicera japonica HOM05D006373 ORTHO05D008145 3.1e-09 65.1 36 80.6
CSS0009190 Camellia sinensis var. sinensis HOM05D006373 ORTHO05D008145 1.2e-08 63.2 36 80.6
Actinidia33446 Actinidia chinensis HOM05D006373 ORTHO05D008145 2.0e-08 62.4 36 75.0
vmacro20974 Vaccinium macrocarpon HOM05D006373 ORTHO05D008145 2.0e-08 62.4 34 82.4
Rhsim01G0155400 Rhododendron simsii HOM05D006373 ORTHO05D008145 2.7e-08 62.0 36 77.8
QL08p050698 Quercus lobata HOM05D006373 ORTHO05D008145 3.5e-08 61.6 36 77.8
Nitab4.5_0004550g0010 Nicotiana tabacum HOM05D006373 ORTHO05D008145 4.5e-08 61.2 36 72.2
Cc02_g37210 Coffea canephora HOM05D006373 ORTHO05D008145 5.9e-08 60.8 36 75.0
Haze_15231 Corylus avellana HOM05D006373 ORTHO05D008145 5.9e-08 60.8 36 77.8
Peaxi162Scf00021g00529 Petunia axillaris HOM05D006373 ORTHO05D008145 5.9e-08 60.8 36 72.2
Sc23g0003310 Simmondsia chinensis HOM05D006373 ORTHO05D008145 5.9e-08 60.8 36 75.0
PGSC0003DMG400017049 Solanum tuberosum HOM05D006373 ORTHO05D008145 5.9e-08 60.8 36 72.2
DCAR_025171 Daucus carota HOM05D006373 ORTHO05D008145 7.8e-08 60.5 36 69.4
MBI12_g11810_MAGBIO Magnolia biondii HOM05D006373 ORTHO05D008145 7.8e-08 60.5 35 71.4
SalBow3G0067 Salvia bowleyana HOM05D006373 ORTHO05D008145 1.0e-07 60.1 36 72.2
Solyc01g091820.3 Solanum lycopersicum HOM05D006373 ORTHO05D008145 1.0e-07 60.1 36 72.2
Sopen01g037590 Solanum pennellii HOM05D006373 ORTHO05D008145 1.0e-07 60.1 36 72.2
Cfa004178 Carpinus fangiana HOM05D006373 ORTHO05D008145 1.3e-07 59.7 36 77.8
Manes.01G262700 Manihot esculenta HOM05D006373 ORTHO05D008145 1.7e-07 59.3 36 75.0
PSO478G1066 Papaver somniferum HOM05D006373 ORTHO05D008145 2.9e-07 58.5 36 75.0
PSO782G5614 Papaver somniferum HOM05D006373 ORTHO05D008145 2.9e-07 58.5 36 75.0
Migut.B01684 Erythranthe guttata HOM05D006373 ORTHO05D008145 5.0e-07 57.8 36 69.4
CANSAT56G4468 Cannabis sativa HOM05D006373 ORTHO05D008145 6.6e-07 57.4 36 69.4
GSVIVG01027599001 Vitis vinifera HOM05D006373 ORTHO05D008145 6.6e-07 57.4 36 75.0
Lj1g0016698 Lotus japonicus HOM05D006373 ORTHO05D008145 8.6e-07 57.0 39 66.7
SGA_v2.0_scaffold153G37065 Striga asiatica HOM05D006373 ORTHO05D008145 8.6e-07 57.0 36 69.4
TAR375G0714 Trochodendron aralioides HOM05D006373 ORTHO05D008145 8.6e-07 57.0 36 69.4
Potri.014G077300 Populus trichocarpa HOM05D006373 ORTHO05D008145 1.1e-06 56.6 36 72.2
arahy.Tifrunner.gnm1.ann1.TZ2CHG Arachis hypogaea HOM05D006373 ORTHO05D008145 1.5e-06 56.2 36 69.4
arahy.Tifrunner.gnm1.ann1.V9KE7M Arachis hypogaea HOM05D006373 ORTHO05D008145 1.5e-06 56.2 36 69.4
Eucgr.E00282 Eucalyptus grandis HOM05D006373 ORTHO05D008145 1.5e-06 56.2 36 69.4
Lalb_Chr01g0021121 Lupinus albus HOM05D006373 ORTHO05D008145 1.5e-06 56.2 36 66.7
Hma1.2p1_0068F.1_g037130 Hydrangea macrophylla HOM05D006373 ORTHO05D008145 3.3e-06 55.1 36 75.0
CAN.G170.53 Capsicum annuum HOM05D006373 ORTHO05D008145 4.3e-06 54.7 36 61.1
EL10Ac1g00966 Beta vulgaris HOM05D006373 ORTHO05D008145 5.6e-06 54.3 36 66.7
CiPaw.02G024800 Carya illinoinensis HOM05D006373 ORTHO05D008145 5.6e-06 54.3 36 69.4
AUR62033368 Chenopodium quinoa HOM05D006373 ORTHO05D008145 5.6e-06 54.3 36 61.1
FAN01G2011 Fragaria x ananassa HOM05D006373 ORTHO05D008145 7.3e-06 53.9 36 66.7
Oeu059230.1 Olea europaea HOM05D006373 ORTHO05D008145 9.5e-06 53.5 34 70.6


User provided reference genes

Program Settings