Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 8.9e-279 963.4 649 100.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 1.4e-159 567.4 455 62.6
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.6e-153 546.6 455 60.4
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 7.1e-151 538.5 458 59.8
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.0e-149 534.6 455 61.8
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 9.6e-148 528.1 453 60.5
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.1e-146 524.6 447 59.5
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.2e-145 521.2 462 59.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.5e-145 520.8 462 59.7
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 4.4e-145 519.2 458 58.7
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 5.8e-145 518.8 453 59.6
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 9.9e-145 518.1 461 59.4
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.9e-144 516.5 478 58.8
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.4e-143 514.2 449 60.6
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 2.4e-143 513.5 459 60.3
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.3e-143 511.5 470 59.8
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.3e-143 511.5 470 59.8
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.2e-142 511.1 449 58.1
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 4.6e-142 509.2 448 57.1
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.0e-141 508.1 439 61.3
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 1.7e-141 507.3 450 58.0
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 5.1e-141 505.8 451 57.2
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.9e-140 503.8 450 59.3
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 3.3e-140 503.1 449 57.0
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.3e-140 502.7 370 68.4
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 5.6e-140 502.3 491 55.8
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 2.1e-139 500.4 451 59.6
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 6.2e-139 498.8 450 59.3
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.1e-138 496.5 435 59.8
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 2.6e-137 493.4 464 56.9
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.7e-136 490.7 469 57.4
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.9e-136 490.0 454 55.9
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 1.9e-135 487.3 447 56.6
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 2.4e-135 486.9 458 57.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 4.2e-135 486.1 457 55.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 7.1e-135 485.3 455 55.8
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.2e-134 484.6 457 55.4
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.8e-133 480.7 445 56.2
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 3.0e-133 479.9 449 55.2
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.0e-133 479.9 429 58.7
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.1e-132 478.0 456 54.8
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 1.1e-132 478.0 445 56.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.9e-132 477.2 459 55.6
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 3.3e-132 476.5 449 56.1
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 4.3e-132 476.1 446 56.1
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 5.6e-132 475.7 455 56.0
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 9.6e-132 474.9 456 55.5
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.3e-131 474.6 457 56.0
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 6.2e-131 472.2 456 55.3
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.8e-130 470.7 429 57.6
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 1.5e-129 467.6 443 56.2
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 2.6e-129 466.8 432 56.5
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.8e-129 465.7 426 57.3
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.3e-128 464.5 470 54.0
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 2.2e-128 463.8 462 55.0
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.2e-128 463.8 469 51.8
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 6.5e-128 462.2 429 56.6
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 8.4e-128 461.8 435 54.9
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 1.1e-127 461.5 446 54.0
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 7.1e-127 458.8 459 51.9
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 1.2e-126 458.0 441 53.5
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 2.1e-126 457.2 436 54.6
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.3e-125 454.5 451 54.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 1.1e-124 451.4 448 54.7
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.9e-124 450.7 364 59.6
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 2.5e-124 450.3 430 56.0
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 2.8e-123 446.8 436 53.7
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 8.2e-123 445.3 453 51.2
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 6.9e-122 442.2 436 54.1
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 2.0e-121 440.7 419 55.1
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.7e-120 437.6 445 52.1
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 2.2e-120 437.2 462 50.9
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 4.2e-119 433.0 445 51.9
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 7.2e-119 432.2 328 65.2
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.6e-118 431.0 436 52.5
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 2.1e-118 430.6 482 49.6
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 2.7e-118 430.3 462 49.4
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 7.9e-118 428.7 451 50.1
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 7.9e-118 428.7 438 53.0
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 2.3e-117 427.2 433 52.7
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 3.3e-116 423.3 336 61.6
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.4e-114 417.9 308 66.2
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.4e-114 417.2 510 46.3
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 5.3e-114 416.0 445 51.9
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 6.9e-114 415.6 328 61.3
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.5e-113 412.9 460 48.5
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 7.7e-113 412.1 336 61.0
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 2.2e-112 410.6 454 50.0
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 2.5e-111 407.1 486 44.9
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 4.6e-110 402.9 368 56.8
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 4.6e-110 402.9 368 56.8
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.3e-109 400.6 354 55.1
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 4.3e-108 396.4 435 48.0
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 5.7e-108 396.0 368 56.2
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 7.4e-108 395.6 368 55.7
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.7e-107 393.3 394 50.5
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 4.1e-106 389.8 368 54.9
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.6e-105 387.1 445 47.0
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 7.7e-105 385.6 447 49.0
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.2e-104 384.0 439 48.1
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 1.4e-98 364.8 372 51.1
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 7.7e-89 332.4 354 52.0
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.7e-78 296.6 265 58.5
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 2.3e-77 294.3 270 55.6
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 7.3e-71 272.7 197 64.5
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 3.0e-64 250.8 276 51.4
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 8.9e-45 186.0 385 31.7
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 4.1e-42 177.2 427 28.6
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 3.4e-36 157.5 381 28.6
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 3.9e-24 117.5 198 36.4
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 1.6e-22 112.1 168 34.5
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 1.1e-21 109.4 140 44.3
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.5e-20 104.0 59 76.3
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 6.3e-06 57.0 187 25.1


User provided reference genes

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