Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 0.0e+00 1261.9 665 100.0
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.3e-261 905.6 586 80.4
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.0e-249 865.9 671 71.4
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 5.4e-247 857.8 696 68.5
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 5.1e-245 851.3 673 70.0
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 9.5e-244 847.0 674 68.4
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 1.2e-243 846.7 679 68.6
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 7.6e-241 837.4 659 70.1
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 1.1e-239 833.6 679 69.4
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 8.7e-237 823.9 676 67.5
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 6.2e-235 817.8 672 67.0
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 3.1e-234 815.5 669 65.9
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 4.0e-234 815.1 615 68.0
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 2.6e-233 812.4 676 66.6
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 1.4e-231 806.6 653 68.9
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.9e-231 806.2 668 66.9
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 9.6e-228 793.9 650 67.1
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 2.6e-225 785.8 660 64.4
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 2.9e-224 782.3 672 64.6
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 9.3e-223 777.3 628 67.2
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 3.0e-221 772.3 609 66.0
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 5.1e-221 771.5 676 61.7
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 8.7e-221 770.8 559 73.3
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.9e-220 769.6 665 63.8
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 3.3e-220 768.8 660 62.7
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 3.3e-220 768.8 678 62.7
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 4.3e-220 768.5 561 73.8
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 5.6e-220 768.1 596 67.3
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 9.6e-220 767.3 600 66.3
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 9.6e-220 767.3 592 69.1
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 2.1e-219 766.1 578 68.5
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 5.3e-218 761.5 591 66.8
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.5e-217 760.0 677 64.3
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 4.5e-217 758.4 576 68.2
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 1.3e-216 756.9 581 67.6
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 1.9e-215 753.1 675 61.2
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 5.5e-215 751.5 665 62.6
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 7.1e-215 751.1 666 61.6
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 7.9e-214 747.7 676 61.4
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.0e-213 747.3 686 62.0
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 2.3e-213 746.1 682 60.9
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 3.0e-213 745.7 676 59.9
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 8.7e-213 744.2 682 61.4
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 3.3e-212 742.3 598 68.4
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 6.2e-211 738.0 591 65.8
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 8.2e-211 737.6 665 61.5
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 6.9e-210 734.6 613 62.6
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 6.9e-210 734.6 685 61.9
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 4.5e-209 731.9 672 60.7
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 7.6e-209 731.1 667 59.4
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 4.9e-208 728.4 675 60.6
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.1e-207 727.2 602 65.9
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.5e-207 726.1 675 60.6
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 4.6e-206 721.8 686 59.8
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.0e-205 720.7 635 62.5
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 2.3e-205 719.5 668 60.8
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.0e-205 719.2 589 63.0
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 3.9e-205 718.8 682 59.8
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.8e-203 712.6 658 59.6
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 6.3e-203 711.4 630 61.6
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 8.2e-203 711.1 622 62.9
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.8e-202 709.9 654 61.9
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 1.8e-202 709.9 684 60.7
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.4e-202 709.5 664 58.3
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.5e-201 706.8 616 62.0
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 7.7e-201 704.5 690 59.7
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.0e-200 704.1 685 57.5
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.0e-200 704.1 667 57.9
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.3e-200 703.7 680 57.6
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 8.5e-200 701.0 590 65.3
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 1.4e-199 700.3 690 57.0
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 1.9e-199 699.9 589 65.4
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.2e-198 697.2 589 63.3
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 2.3e-197 693.0 606 62.5
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 5.1e-197 691.8 553 66.5
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 8.8e-197 691.0 464 77.8
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.3e-196 689.1 582 65.3
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 5.7e-196 688.3 554 65.7
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 7.7e-193 677.9 590 62.2
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 9.4e-191 671.0 615 58.0
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 1.6e-190 670.2 680 55.4
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 2.1e-190 669.8 448 77.0
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 3.6e-190 669.1 610 58.9
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.0e-189 667.5 592 63.9
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 6.7e-189 664.8 679 54.5
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 6.3e-187 658.3 661 56.9
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 1.0e-184 651.0 640 57.3
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.1e-183 647.5 671 54.5
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 3.6e-182 642.5 613 56.3
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 1.8e-181 640.2 529 66.4
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 3.0e-181 639.4 622 56.1
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 4.4e-180 635.6 626 58.6
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 4.1e-178 629.0 591 57.5
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 6.3e-171 605.1 549 59.6
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 2.8e-163 579.7 663 51.7
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 9.1e-162 574.7 531 62.0
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 3.0e-157 559.7 544 57.0
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 4.6e-137 492.7 604 49.7
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 5.6e-111 406.0 285 67.4
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 9.4e-82 308.9 436 42.2
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 9.4e-82 308.9 436 42.2
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 2.3e-72 277.7 439 39.2
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.3e-56 224.6 426 35.4
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.4e-40 172.2 144 60.4
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 7.0e-37 159.8 208 45.2
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.4e-29 134.8 226 41.6
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 3.4e-23 114.4 122 56.6
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 2.1e-17 95.1 110 47.3
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.4e-16 92.4 207 31.4
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 3.7e-14 84.3 300 30.0
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 2.5e-10 71.6 106 34.0
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.6e-10 70.5 99 48.5
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 4.7e-09 67.4 50 52.0
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 1.4e-08 65.9 129 33.3
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.8e-08 65.5 85 36.5
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 8.9e-08 63.2 198 28.8


User provided reference genes

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