Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 0.0e+00 1136.7 594 100.0
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 2.0e-224 782.7 642 69.2
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 5.2e-217 758.1 638 65.4
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 6.4e-215 751.1 633 65.1
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 3.0e-212 742.3 657 64.1
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 1.6e-210 736.5 650 62.5
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-206 723.8 640 64.2
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 1.2e-200 703.7 590 68.0
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 4.9e-199 698.4 639 62.0
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 1.9e-195 686.4 564 64.5
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 4.3e-195 685.3 643 61.3
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 5.6e-195 684.9 634 61.4
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 7.3e-195 684.5 448 79.7
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 7.3e-195 684.5 636 60.8
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 9.6e-195 684.1 642 60.4
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 1.6e-194 683.3 626 60.1
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 2.0e-192 676.4 641 59.0
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 2.0e-192 676.4 641 61.8
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 2.0e-192 676.4 636 61.2
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 2.6e-192 676.0 652 59.2
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 2.9e-191 672.5 611 63.3
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 3.5e-189 665.6 651 59.4
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 1.3e-188 663.7 651 58.5
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 3.9e-188 662.1 649 59.6
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 3.9e-188 662.1 636 61.5
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 6.6e-188 661.4 634 60.4
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.1e-187 660.6 636 59.7
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.3e-186 657.1 650 58.9
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 2.8e-186 656.0 638 58.3
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 6.2e-186 654.8 639 58.2
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-185 654.1 658 56.4
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.8e-185 653.3 636 58.6
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 4.0e-185 652.1 706 55.2
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 9.0e-185 651.0 642 58.9
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.2e-184 650.6 635 58.3
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 7.6e-184 647.9 664 55.9
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 9.9e-184 647.5 644 59.8
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 1.7e-183 646.7 639 58.4
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 2.2e-183 646.4 651 57.9
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.9e-183 645.2 634 58.7
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 8.4e-183 644.4 652 56.7
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.4e-183 644.4 486 68.9
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 8.4e-183 644.4 641 60.5
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 1.1e-182 644.0 637 58.4
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 1.4e-182 643.7 641 56.6
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 6.0e-181 638.3 650 56.3
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.5e-179 633.6 514 66.1
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 2.5e-179 632.9 651 58.2
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 4.3e-179 632.1 663 55.1
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 2.6e-176 622.9 644 58.1
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-175 620.5 658 55.6
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 6.4e-175 618.2 402 77.4
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.3e-172 609.8 637 57.1
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 3.9e-172 609.0 631 56.6
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-170 602.8 638 55.3
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 6.9e-169 598.2 655 54.2
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.2e-168 597.4 621 57.5
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 3.4e-168 595.9 652 53.2
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 4.9e-167 592.0 659 53.4
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 3.2e-166 589.3 654 51.5
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 1.6e-165 587.0 652 53.4
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 2.7e-165 586.3 652 56.0
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 4.6e-165 585.5 655 55.3
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 1.5e-163 580.5 391 75.4
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 3.3e-163 579.3 654 51.4
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 4.3e-163 578.9 658 52.6
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 8.2e-162 574.7 637 55.1
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.7e-159 567.0 573 60.2
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 3.8e-159 565.8 669 51.0
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 6.5e-159 565.1 625 56.5
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 8.5e-159 564.7 646 51.5
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.7e-156 554.7 574 57.3
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 1.5e-155 553.9 525 57.7
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 6.3e-154 548.5 578 58.3
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 1.3e-151 540.8 651 50.4
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 8.5e-151 538.1 630 51.9
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 3.2e-150 536.2 708 49.2
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 4.6e-149 532.3 589 55.2
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 3.0e-148 529.6 417 66.2
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 2.0e-144 516.9 442 61.3
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 3.4e-144 516.2 596 52.9
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 5.0e-143 512.3 692 46.7
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 1.9e-142 510.4 635 50.6
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 5.5e-142 508.8 423 61.9
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 1.1e-139 501.1 476 58.6
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 5.5e-134 482.3 643 46.5
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.0e-131 473.8 638 47.2
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 1.6e-128 464.2 313 73.8
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 5.9e-128 462.2 411 60.3
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 1.1e-126 458.0 359 64.9
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 4.2e-126 456.1 480 55.8
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 1.7e-122 444.1 359 65.7
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 1.7e-122 444.1 645 45.4
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 2.9e-119 433.3 500 49.6
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.1e-118 431.4 494 51.2
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.9e-118 430.6 749 42.7
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 2.1e-117 427.2 608 45.9
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 4.9e-114 416.0 415 55.7
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.1e-113 414.8 439 56.9
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 2.4e-113 413.7 536 47.2
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 4.5e-112 409.5 297 71.4
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 1.8e-108 397.5 431 49.9
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 6.8e-108 395.6 288 70.5
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 8.3e-106 388.7 475 45.3
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 2.9e-98 363.6 429 54.8
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 7.3e-94 349.0 602 40.0
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 2.0e-91 340.9 433 51.5
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 4.4e-91 339.7 434 51.8
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 1.7e-90 337.8 607 40.0
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.9e-90 337.0 345 58.8
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.9e-89 334.3 319 58.3
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 7.3e-86 322.4 566 42.8
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-85 320.5 536 42.0
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.9e-81 307.8 269 61.0
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 5.4e-81 306.2 317 63.1
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.6e-72 278.1 442 39.8
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 4.6e-72 276.6 342 45.3
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 2.8e-69 267.3 167 76.0
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 7.1e-65 252.7 611 37.5
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 2.4e-60 237.7 195 64.6
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 1.9e-57 228.0 167 63.5
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 6.2e-53 213.0 145 72.4
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 2.9e-50 204.1 164 64.6
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 2.7e-48 197.6 185 58.4
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 1.3e-47 195.3 162 62.3
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.3e-47 194.5 145 71.7
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 5.1e-47 193.4 586 35.2
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 2.5e-46 191.0 171 60.2
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 3.4e-43 180.6 164 57.9
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 5.9e-43 179.9 145 64.1
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.5e-41 173.3 119 73.9
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.7e-40 171.0 130 70.0
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 1.1e-36 159.1 215 47.0
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 1.8e-36 158.3 136 59.6
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 3.1e-36 157.5 232 50.4
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 5.0e-34 150.2 87 77.0
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 3.6e-32 144.1 87 79.3
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 1.7e-29 135.2 264 34.8
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 1.4e-28 132.1 290 31.7
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 1.5e-27 128.6 131 55.7
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 6.5e-26 123.2 135 53.3
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 3.2e-25 120.9 136 54.4
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-24 118.6 90 63.3
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-23 114.0 92 62.0
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-23 114.0 92 62.0
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-23 114.0 92 62.0
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-23 114.0 92 62.0
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 1.5e-22 112.1 64 76.6
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.5e-22 112.1 142 53.5
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 3.3e-22 110.9 68 82.4
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 7.4e-22 109.8 84 65.5
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.7e-21 107.5 86 61.6
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.2e-19 102.4 110 55.5
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 2.0e-19 101.7 141 44.0
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 2.6e-19 101.3 69 69.6
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 1.7e-18 98.6 68 64.7
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 1.7e-18 98.6 68 64.7
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 3.2e-17 94.4 124 43.5
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 5.5e-17 93.6 54 79.6
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 4.0e-15 87.4 147 39.5
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 9.7e-14 82.8 359 22.0
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 9.7e-14 82.8 74 58.1
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.3e-13 82.4 70 60.0
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.2e-13 81.6 165 42.4
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.2e-13 79.7 51 82.4
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.7e-11 74.7 81 48.1
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 5.0e-10 70.5 46 63.0
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 5.0e-10 70.5 46 63.0
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 8.5e-10 69.7 53 66.0
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 8.5e-10 69.7 40 82.5
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 1.5e-09 68.9 46 60.9
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 1.2e-08 65.9 52 63.5
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 2.0e-06 58.5 56 58.9
Os03g0715332 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 2.0e-06 58.5 55 54.5


User provided reference genes

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