Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 1.5e-52 209.1 100 100.0
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 2.3e-48 195.3 100 94.0
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 1.6e-46 189.1 101 92.1
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 2.1e-46 188.7 100 89.0
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 3.6e-46 188.0 100 90.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 4.7e-46 187.6 100 88.0
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 4.7e-46 187.6 101 90.1
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.7e-46 187.6 100 89.0
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 92.1
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 1.1e-45 186.4 100 89.0
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 1.1e-45 186.4 100 88.0
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 1.1e-45 186.4 99 87.9
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 1.1e-45 186.4 101 90.1
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 1.4e-45 186.0 101 92.1
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 1.4e-45 186.0 100 89.0
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 1.4e-45 186.0 100 88.0
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 3.1e-45 184.9 100 87.0
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 4.0e-45 184.5 100 87.0
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 4.0e-45 184.5 100 87.0
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 4.0e-45 184.5 101 88.1
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 6.8e-45 183.7 100 87.0
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 1.2e-44 183.0 100 87.0
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 1.2e-44 183.0 100 87.0
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.5e-44 182.6 101 89.1
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 2.0e-44 182.2 100 86.0
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 2.0e-44 182.2 101 89.1
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 2.0e-44 182.2 100 87.0
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 2.6e-44 181.8 100 86.0
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.6e-44 181.8 101 88.1
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 3.4e-44 181.4 100 85.0
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 3.4e-44 181.4 101 87.1
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 4.4e-44 181.0 100 84.0
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 4.4e-44 181.0 100 84.0
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 5.8e-44 180.6 100 86.0
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 5.8e-44 180.6 100 86.0
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 7.5e-44 180.3 101 88.1
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 9.9e-44 179.9 100 86.0
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 9.9e-44 179.9 100 85.0
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 9.9e-44 179.9 101 87.1
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 9.9e-44 179.9 100 85.0
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 88.0
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 86.0
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 1.3e-43 179.5 101 87.1
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 1.3e-43 179.5 101 87.1
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 1.3e-43 179.5 101 88.1
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 83.0
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 1.7e-43 179.1 100 86.0
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.7e-43 179.1 101 87.1
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 2.2e-43 178.7 100 85.0
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 86.1
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 2.2e-43 178.7 100 86.0
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 2.9e-43 178.3 100 85.0
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 3.7e-43 177.9 101 86.1
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 3.7e-43 177.9 100 85.0
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 3.7e-43 177.9 101 86.1
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 3.7e-43 177.9 101 86.1
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 4.9e-43 177.6 100 83.0
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 4.9e-43 177.6 100 84.0
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 4.9e-43 177.6 100 86.0
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 6.4e-43 177.2 113 77.9
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 6.4e-43 177.2 100 83.0
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 6.4e-43 177.2 101 87.1
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 82.0
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 82.0
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 82.0
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 82.0
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 85.0
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 84.0
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 84.0
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 82.0
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 83.0
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.1e-42 176.4 102 85.3
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 85.0
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 1.1e-42 176.4 102 86.3
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.4e-42 176.0 100 83.0
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 1.4e-42 176.0 100 82.0
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 1.4e-42 176.0 100 81.0
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 1.9e-42 175.6 100 81.0
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 2.4e-42 175.3 100 81.0
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 3.2e-42 174.9 98 84.7
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 4.1e-42 174.5 101 84.2
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 4.1e-42 174.5 100 82.0
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 1.2e-41 172.9 102 83.3
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 6.0e-41 170.6 101 84.2
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 6.0e-41 170.6 102 80.4
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 7.8e-41 170.2 102 81.4
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 7.8e-41 170.2 100 82.0
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.0e-40 169.9 102 80.4
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 5.1e-40 167.5 101 81.2
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 8.6e-40 166.8 99 81.8
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 1.5e-39 166.0 99 84.8
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 2.5e-39 165.2 126 67.5
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 2.8e-38 161.8 91 83.5
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 2.8e-38 161.8 106 76.4
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 3.6e-38 161.4 92 85.9
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 4.7e-38 161.0 93 84.9
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 8.1e-38 160.2 100 72.0
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 5.2e-37 157.5 100 71.0
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 3.4e-36 154.8 91 81.3
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 8.4e-35 150.2 100 70.0
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 2.4e-34 148.7 87 80.5
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 1.3e-32 142.9 101 63.4
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 2.3e-32 142.1 100 66.0
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 1.5e-31 139.4 98 65.3
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 2.5e-31 138.7 93 72.0
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.3e-30 136.3 73 86.3
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 1.2e-28 129.8 67 91.0
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.5e-28 129.4 71 83.1
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.0e-28 129.0 65 90.8
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 4.4e-28 127.9 65 90.8
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 3.8e-27 124.8 100 54.0
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 8.4e-27 123.6 94 71.3
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 2.7e-25 118.6 92 62.0
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 6.0e-25 117.5 105 57.1
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.0e-24 116.7 73 79.5
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 6.6e-24 114.0 74 75.7
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 1.3e-19 99.8 101 49.5
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 2.2e-19 99.0 61 77.0
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 4.6e-17 91.3 54 87.0
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 2.1e-14 82.4 62 66.1
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 7.9e-09 63.9 43 69.8
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 5.1e-08 61.2 44 63.6
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 3.3e-07 58.5 41 65.9
Gohir.D11G088350 Gossypium hirsutum HOM05D006419 ORTHO05D008096 8.2e-06 53.9 38 65.8


User provided reference genes

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