Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32291 Davidia involucrata HOM05D005404 ORTHO05D006623 7.2e-46 187.2 116 100.0
GSVIVG01021395001 Vitis vinifera HOM05D005404 ORTHO05D006623 5.1e-44 181.0 116 87.9
TAR626G1892 Trochodendron aralioides HOM05D005404 ORTHO05D006623 8.8e-44 180.3 116 86.2
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea HOM05D005404 ORTHO05D006623 5.7e-43 177.6 116 85.3
Duzib101G0001 Durio zibethinus HOM05D005404 ORTHO05D006623 7.4e-43 177.2 116 86.2
Duzib192G1075 Durio zibethinus HOM05D005404 ORTHO05D006623 7.4e-43 177.2 116 86.2
Cc00_g15980 Coffea canephora HOM05D005404 ORTHO05D006623 1.7e-42 176.0 116 86.2
Nn3g20867 Nelumbo nucifera HOM05D005404 ORTHO05D006623 4.8e-42 174.5 117 94.9
Potri.001G352600 Populus trichocarpa HOM05D005404 ORTHO05D006623 6.3e-42 174.1 116 85.3
CANSAT35G0205 Cannabis sativa HOM05D005404 ORTHO05D006623 8.2e-42 173.7 116 84.5
Duzib160G0646 Durio zibethinus HOM05D005404 ORTHO05D006623 8.2e-42 173.7 116 83.6
Aqoxy4G00127 Aquilegia oxysepala HOM05D005404 ORTHO05D006623 1.1e-41 173.3 117 84.6
PSO017G4964 Papaver somniferum HOM05D005404 ORTHO05D006623 1.4e-41 172.9 114 85.1
Lalb_Chr12g0208831 Lupinus albus HOM05D005404 ORTHO05D006623 1.8e-41 172.6 116 87.9
CiPaw.09G128300 Carya illinoinensis HOM05D005404 ORTHO05D006623 2.4e-41 172.2 116 86.2
Duzib235G1537 Durio zibethinus HOM05D005404 ORTHO05D006623 2.4e-41 172.2 116 83.6
Gohir.D10G039300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 2.4e-41 172.2 116 84.5
Gorai.011G041300 Gossypium raimondii HOM05D005404 ORTHO05D006623 2.4e-41 172.2 116 84.5
MBI07_g07833_MAGBIO Magnolia biondii HOM05D005404 ORTHO05D006623 3.1e-41 171.8 116 83.6
COL.COLO4_07492 Corchorus olitorius HOM05D005404 ORTHO05D006623 4.1e-41 171.4 116 84.5
Rhsim02G0154900 Rhododendron simsii HOM05D005404 ORTHO05D006623 4.1e-41 171.4 116 83.6
Thecc.06G156200 Theobroma cacao HOM05D005404 ORTHO05D006623 5.3e-41 171.0 116 82.8
Gohir.A10G038300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 6.9e-41 170.6 116 83.6
Ca_18287_v3 Cicer arietinum L. HOM05D005404 ORTHO05D006623 1.2e-40 169.9 116 82.8
PSO170G1289 Papaver somniferum HOM05D005404 ORTHO05D006623 1.2e-40 169.9 114 83.3
FAN11G2394 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.5e-40 169.5 119 84.9
PGR042G3093 Punica granatum HOM05D005404 ORTHO05D006623 1.5e-40 169.5 116 82.8
Ciclev10017167m.g Citrus clementina HOM05D005404 ORTHO05D006623 2.0e-40 169.1 117 83.8
Manes.15G118100 Manihot esculenta HOM05D005404 ORTHO05D006623 2.0e-40 169.1 116 91.4
MELO3C007159.2 Cucumis melo HOM05D005404 ORTHO05D006623 2.6e-40 168.7 116 82.8
CsaV3_6G051470 Cucumis sativus L. HOM05D005404 ORTHO05D006623 2.6e-40 168.7 116 82.8
Eucgr.E02375 Eucalyptus grandis HOM05D005404 ORTHO05D006623 3.4e-40 168.3 116 82.8
FAN21G0592 Fragaria x ananassa HOM05D005404 ORTHO05D006623 3.4e-40 168.3 119 84.0
Glyma.05G127400 Glycine max HOM05D005404 ORTHO05D006623 3.4e-40 168.3 117 82.9
Sed0003587 Sechium edule HOM05D005404 ORTHO05D006623 3.4e-40 168.3 116 82.8
Hund21493 Selenicereus undatus HOM05D005404 ORTHO05D006623 3.4e-40 168.3 116 82.8
Psat7g091480 Pisum sativum HOM05D005404 ORTHO05D006623 4.5e-40 167.9 116 81.9
Glyma.08G082100 Glycine max HOM05D005404 ORTHO05D006623 7.7e-40 167.2 117 82.1
Atru.chr10.1368 Acer truncatum HOM05D005404 ORTHO05D006623 1.0e-39 166.8 116 89.7
EL10Ac8g19776 Beta vulgaris HOM05D005404 ORTHO05D006623 1.3e-39 166.4 116 81.9
HanXRQChr11g0340931 Helianthus annuus HOM05D005404 ORTHO05D006623 1.3e-39 166.4 116 81.9
Prupe.4G075200 Prunus persica HOM05D005404 ORTHO05D006623 1.3e-39 166.4 120 80.0
VMungo0251G2631 Vigna mungo HOM05D005404 ORTHO05D006623 1.3e-39 166.4 116 81.0
Haze_05531 Corylus avellana HOM05D005404 ORTHO05D006623 2.2e-39 165.6 116 81.9
MD16G1202800 Malus domestica HOM05D005404 ORTHO05D006623 2.9e-39 165.2 120 80.8
TWI53G0717 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 2.9e-39 165.2 118 82.2
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 3.8e-39 164.9 116 89.7
Lj2A310T44 Lonicera japonica HOM05D005404 ORTHO05D006623 6.5e-39 164.1 116 90.5
MD05G1290500 Malus domestica HOM05D005404 ORTHO05D006623 8.5e-39 163.7 120 79.2
DCAR_003948 Daucus carota HOM05D005404 ORTHO05D006623 1.1e-38 163.3 117 82.9
TWI09G1218 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 1.1e-38 163.3 112 89.3
Nn4g26481 Nelumbo nucifera HOM05D005404 ORTHO05D006623 1.4e-38 162.9 137 73.0
Phvul.002G197500 Phaseolus vulgaris HOM05D005404 ORTHO05D006623 1.9e-38 162.5 116 80.2
DCAR_007905 Daucus carota HOM05D005404 ORTHO05D006623 3.2e-38 161.8 117 81.2
Manes.17G066000 Manihot esculenta HOM05D005404 ORTHO05D006623 3.2e-38 161.8 116 86.2
Lj4g0012372 Lotus japonicus HOM05D005404 ORTHO05D006623 4.2e-38 161.4 116 78.4
Medtr4g094580 Medicago truncatula HOM05D005404 ORTHO05D006623 5.5e-38 161.0 117 80.3
QL05p060078 Quercus lobata HOM05D005404 ORTHO05D006623 9.4e-38 160.2 115 87.0
CDE08G1548 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 1.6e-37 159.5 112 80.4
Nitab4.5_0000206g0130 Nicotiana tabacum HOM05D005404 ORTHO05D006623 1.6e-37 159.5 116 77.6
Sc05g0006520 Simmondsia chinensis HOM05D005404 ORTHO05D006623 1.6e-37 159.5 116 79.3
Solyc02g071150.3 Solanum lycopersicum HOM05D005404 ORTHO05D006623 2.1e-37 159.1 116 76.7
Sopen02g020230 Solanum pennellii HOM05D005404 ORTHO05D006623 2.1e-37 159.1 116 76.7
BcaB03g12183 Brassica carinata HOM05D005404 ORTHO05D006623 3.6e-37 158.3 120 78.3
THA.LOC104812663 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 3.6e-37 158.3 116 79.3
Sp1g25740 Schrenkiella parvula HOM05D005404 ORTHO05D006623 6.1e-37 157.5 119 79.0
Peaxi162Scf00482g00049 Petunia axillaris HOM05D005404 ORTHO05D006623 7.9e-37 157.1 116 76.7
CDE02G1967 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 1.4e-36 156.4 116 84.5
Os05g0547850 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 1.4e-36 156.4 116 76.7
BcaB03g13855 Brassica carinata HOM05D005404 ORTHO05D006623 1.8e-36 156.0 119 78.2
Carub.0001s2809 Capsella rubella HOM05D005404 ORTHO05D006623 1.8e-36 156.0 116 78.4
TAR627G1065 Trochodendron aralioides HOM05D005404 ORTHO05D006623 1.8e-36 156.0 104 84.6
BcaC01g00143 Brassica carinata HOM05D005404 ORTHO05D006623 2.3e-36 155.6 119 78.2
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 2.3e-36 155.6 119 78.2
BcaB07g32570 Brassica carinata HOM05D005404 ORTHO05D006623 3.0e-36 155.2 116 76.7
Lsat_1_v5_gn_1_91580 Lactuca sativa HOM05D005404 ORTHO05D006623 5.1e-36 154.5 117 83.8
BcaC06g35468 Brassica carinata HOM05D005404 ORTHO05D006623 8.8e-36 153.7 119 76.5
Thhalv10009098m.g Eutrema salsugineum HOM05D005404 ORTHO05D006623 8.8e-36 153.7 119 77.3
FvH4_3g06230 Fragaria vesca HOM05D005404 ORTHO05D006623 1.1e-35 153.3 119 86.6
ATR0681G149 Amborella trichopoda HOM05D005404 ORTHO05D006623 1.5e-35 152.9 103 82.5
C05p28570 Brassica napus HOM05D005404 ORTHO05D006623 1.5e-35 152.9 116 75.9
CARHR029600 Cardamine hirsuta HOM05D005404 ORTHO05D006623 1.5e-35 152.9 119 76.5
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 2.0e-35 152.5 117 75.2
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla HOM05D005404 ORTHO05D006623 2.6e-35 152.1 152 63.8
BcaC05g26997 Brassica carinata HOM05D005404 ORTHO05D006623 7.4e-35 150.6 116 75.0
FAN25G0636 Fragaria x ananassa HOM05D005404 ORTHO05D006623 9.7e-35 150.2 119 85.7
FAN25G2540 Fragaria x ananassa HOM05D005404 ORTHO05D006623 9.7e-35 150.2 119 85.7
ECA248G0679 Erigeron canadensis HOM05D005404 ORTHO05D006623 2.2e-34 149.1 116 83.6
unitig_26.g10094 Utricularia gibba HOM05D005404 ORTHO05D006623 2.8e-34 148.7 114 71.9
Sabra16G0231900 Salix brachista HOM05D005404 ORTHO05D006623 3.7e-34 148.3 87 94.3
RcHm_v2.0_Chr5g0013081 Rosa chinensis HOM05D005404 ORTHO05D006623 4.8e-34 147.9 119 84.0
SGA_v2.0_scaffold333G49013 Striga asiatica HOM05D005404 ORTHO05D006623 6.3e-34 147.5 114 71.9
MSTRG.16208 Avicennia marina HOM05D005404 ORTHO05D006623 1.1e-33 146.7 114 71.9
Oeu012458.1 Olea europaea HOM05D005404 ORTHO05D006623 1.4e-33 146.4 114 81.6
THA.LOC104814282 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 3.1e-33 145.2 117 83.8
BraA07t28813Z Brassica rapa HOM05D005404 ORTHO05D006623 4.1e-33 144.8 110 75.5
Oeu046548.1 Olea europaea HOM05D005404 ORTHO05D006623 4.1e-33 144.8 114 80.7
BolC7t42063H Brassica oleracea HOM05D005404 ORTHO05D006623 7.0e-33 144.1 110 74.5
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 7.0e-33 144.1 108 76.9
SalBow7G3345 Salvia bowleyana HOM05D005404 ORTHO05D006623 7.0e-33 144.1 114 78.1
A07p10200 Brassica napus HOM05D005404 ORTHO05D006623 9.1e-33 143.7 108 75.9
BolC3t19881H Brassica oleracea HOM05D005404 ORTHO05D006623 9.1e-33 143.7 108 76.9
FAN16G2304 Fragaria x ananassa HOM05D005404 ORTHO05D006623 4.5e-32 141.4 119 82.4
Migut.H01386 Erythranthe guttata HOM05D005404 ORTHO05D006623 1.0e-31 140.2 115 70.4
Zm00001eb294640 Zea mays HOM05D005404 ORTHO05D006623 3.8e-31 138.3 116 76.7
AUR62027578 Chenopodium quinoa HOM05D005404 ORTHO05D006623 5.5e-30 134.4 82 91.5
AL1G43680 Arabidopsis lyrata HOM05D005404 ORTHO05D006623 9.4e-30 133.7 120 71.7
CAN.G257.34 Capsicum annuum HOM05D005404 ORTHO05D006623 1.6e-29 132.9 116 75.0
Oeu052389.2 Olea europaea HOM05D005404 ORTHO05D006623 2.1e-29 132.5 142 61.3
AT1G29850 Arabidopsis thaliana HOM05D005404 ORTHO05D006623 3.6e-29 131.7 119 77.3
MD09G1183100 Malus domestica HOM05D005404 ORTHO05D006623 8.0e-29 130.6 82 90.2
AUR62035781 Chenopodium quinoa HOM05D005404 ORTHO05D006623 1.4e-28 129.8 80 90.0
MSTRG.14760 Avicennia marina HOM05D005404 ORTHO05D006623 6.7e-28 127.5 110 68.2
PGSC0003DMG400003081 Solanum tuberosum HOM05D005404 ORTHO05D006623 2.6e-27 125.6 116 74.1
AUR62023445 Chenopodium quinoa HOM05D005404 ORTHO05D006623 3.3e-27 125.2 86 80.2
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis HOM05D005404 ORTHO05D006623 9.7e-27 123.6 80 85.0
Zm00001eb342640 Zea mays HOM05D005404 ORTHO05D006623 1.7e-26 122.9 80 85.0
Nitab4.5_0008782g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 2.8e-26 122.1 116 69.0
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea HOM05D005404 ORTHO05D006623 9.1e-25 117.1 68 94.1
Mapoly0080s0013 Marchantia polymorpha HOM05D005404 ORTHO05D006623 2.0e-24 115.9 81 81.5
TAR636G3446 Trochodendron aralioides HOM05D005404 ORTHO05D006623 3.5e-24 115.2 83 79.5
Cpa.g.sc17.100 Carica papaya HOM05D005404 ORTHO05D006623 1.7e-23 112.8 66 93.9
Pp3c14_19320 Physcomitrium patens HOM05D005404 ORTHO05D006623 2.2e-23 112.5 81 76.5
Peaxi162Scf00121g02445 Petunia axillaris HOM05D005404 ORTHO05D006623 3.2e-22 108.6 116 62.1
Os05g0546500 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 9.4e-22 107.1 70 84.3
SMO358G0232 Selaginella moellendorffii HOM05D005404 ORTHO05D006623 1.2e-21 106.7 114 67.5
Aa31LG6G5780 Aethionema arabicum HOM05D005404 ORTHO05D006623 8.0e-21 104.0 83 72.3
SEGI_04398 Sequoiadendron giganteum HOM05D005404 ORTHO05D006623 3.0e-20 102.1 68 83.8
CBR_g45965 Chara braunii HOM05D005404 ORTHO05D006623 1.5e-19 99.8 83 65.1
C07p15720 Brassica napus HOM05D005404 ORTHO05D006623 7.0e-17 90.9 91 61.5
Cre12.g557800 Chlamydomonas reinhardtii HOM05D005404 ORTHO05D006623 9.1e-17 90.5 119 48.7
C03p76250 Brassica napus HOM05D005404 ORTHO05D006623 1.6e-16 89.7 52 94.2
Nitab4.5_0003527g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 2.0e-16 89.4 58 84.5
ClCG01G024320 Citrullus lanatus HOM05D005404 ORTHO05D006623 5.9e-16 87.8 116 51.7
HPP92_021557 Vanilla planifolia HOM05D005404 ORTHO05D006623 7.7e-16 87.4 54 88.9
PRCOL_00005423 Prasinoderma coloniale HOM05D005404 ORTHO05D006623 1.9e-14 82.8 87 52.9
CSS0048314 Camellia sinensis var. sinensis HOM05D005404 ORTHO05D006623 9.4e-14 80.5 75 72.0
Nitab4.5_0010964g0060 Nicotiana tabacum HOM05D000728 ORTHO05D001474 1.2e-13 80.1 71 69.0
Hund21505 Selenicereus undatus HOM05D005404 ORTHO05D006623 4.4e-11 71.6 110 45.5
arahy.Tifrunner.gnm1.ann1.HCY9BB Arachis hypogaea HOM05D005404 ORTHO05D006623 7.0e-09 64.3 48 70.8
Nn4g23354 Nelumbo nucifera HOM05D005404 ORTHO05D006623 7.7e-08 60.8 40 82.5
HPP92_021556 Vanilla planifolia HOM05D000864 ORTHO05D001658 5.5e-06 54.7 48 60.4
A09p36640 Brassica napus HOM05D005404 ORTHO05D006623 7.2e-06 54.3 51 62.7


User provided reference genes

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