Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31447 Davidia involucrata HOM05D006021 ORTHO05D007747 1.3e-108 396.4 193 100.0
Dinv26002 Davidia involucrata HOM05D006021 ORTHO05D007747 4.6e-74 281.6 149 90.6
vmacro10241 Vaccinium macrocarpon HOM05D006021 ORTHO05D007747 1.4e-67 260.0 149 82.6
Actinidia29224 Actinidia chinensis HOM05D006021 ORTHO05D007747 5.5e-67 258.1 146 82.9
Rhsim09G0165400 Rhododendron simsii HOM05D006021 ORTHO05D007747 4.7e-66 255.0 149 80.5
CSS0040652 Camellia sinensis var. sinensis HOM05D006021 ORTHO05D007747 1.0e-65 253.8 149 80.5
TAR636G1861 Trochodendron aralioides HOM05D006021 ORTHO05D007747 2.3e-65 252.7 149 78.5
Nitab4.5_0006095g0010 Nicotiana tabacum HOM05D006021 ORTHO05D007747 8.8e-65 250.8 153 77.8
Migut.F01499 Erythranthe guttata HOM05D006021 ORTHO05D007747 1.1e-64 250.4 149 78.5
Lj1C935G17 Lonicera japonica HOM05D006021 ORTHO05D007747 1.1e-64 250.4 162 75.9
DCAR_012451 Daucus carota HOM05D006021 ORTHO05D007747 4.4e-64 248.4 149 77.2
Nitab4.5_0006262g0010 Nicotiana tabacum HOM05D006021 ORTHO05D007747 1.3e-63 246.9 153 76.5
Peaxi162Scf00015g00149 Petunia axillaris HOM05D006021 ORTHO05D007747 6.3e-63 244.6 149 77.9
PGSC0003DMG400023528 Solanum tuberosum HOM05D006021 ORTHO05D007747 1.1e-62 243.8 149 77.2
GSVIVG01016534001 Vitis vinifera HOM05D006021 ORTHO05D007747 1.4e-62 243.4 149 78.5
Sopen05g033000 Solanum pennellii HOM05D006021 ORTHO05D007747 2.4e-62 242.7 147 77.6
CAN.G1013.12 Capsicum annuum HOM05D006021 ORTHO05D007747 3.1e-62 242.3 149 75.8
Cc02_g08000 Coffea canephora HOM05D006021 ORTHO05D007747 3.1e-62 242.3 149 76.5
Cfa001493 Carpinus fangiana HOM05D006021 ORTHO05D007747 7.0e-62 241.1 149 75.8
SGA_v2.0_scaffold108G31009 Striga asiatica HOM05D006021 ORTHO05D002218 7.0e-62 241.1 149 76.5
SalBow6G7105 Salvia bowleyana HOM05D006021 ORTHO05D007747 1.2e-61 240.4 166 68.7
Solyc05g054520.4 Solanum lycopersicum HOM05D006021 ORTHO05D007747 2.0e-61 239.6 149 76.5
CANSAT56G3892 Cannabis sativa HOM05D006021 ORTHO05D007747 3.5e-61 238.8 149 74.5
Prupe.2G233300 Prunus persica HOM05D006021 ORTHO05D007747 1.0e-60 237.3 163 71.8
Cpa.g.sc1.396 Carica papaya HOM05D006021 ORTHO05D007747 5.0e-60 235.0 149 73.8
MBI05_g22898_MAGBIO Magnolia biondii HOM05D006021 ORTHO05D007747 5.0e-60 235.0 147 75.5
Thecc.10G044200 Theobroma cacao HOM05D006021 ORTHO05D007747 5.0e-60 235.0 147 74.1
Migut.F01631 Erythranthe guttata HOM05D006021 ORTHO05D007747 8.5e-60 234.2 174 66.7
MBI05_g44084_MAGBIO Magnolia biondii HOM05D006021 ORTHO05D007747 1.1e-59 233.8 145 75.9
Duzib106G0269 Durio zibethinus HOM05D006021 ORTHO05D007747 3.2e-59 232.3 156 68.6
Eucgr.J00022 Eucalyptus grandis HOM05D006021 ORTHO05D007747 4.2e-59 231.9 149 73.2
HanXRQChr14g0458171 Helianthus annuus HOM05D006021 ORTHO05D007747 4.2e-59 231.9 149 73.8
Atru.chr12.463 Acer truncatum HOM05D006021 ORTHO05D007747 5.5e-59 231.5 149 71.1
TWI15G0276 Tripterygium wilfordii HOM05D006021 ORTHO05D007747 9.4e-59 230.7 147 74.1
Ciclev10031583m.g Citrus clementina HOM05D006021 ORTHO05D007747 1.6e-58 229.9 149 71.8
COL.COLO4_14996 Corchorus olitorius HOM05D006021 ORTHO05D007747 1.6e-58 229.9 145 73.1
Nn2g10394 Nelumbo nucifera HOM05D006021 ORTHO05D007747 1.6e-58 229.9 149 71.8
Atru.chr12.485 Acer truncatum HOM05D006021 ORTHO05D007747 2.1e-58 229.6 149 70.5
Glyma.02G093000 Glycine max HOM05D006021 ORTHO05D007747 3.6e-58 228.8 149 68.5
VMungo1383G0472 Vigna mungo HOM05D006021 ORTHO05D007747 3.6e-58 228.8 149 69.1
arahy.Tifrunner.gnm1.ann1.53WLRG Arachis hypogaea HOM05D006021 ORTHO05D007747 6.1e-58 228.0 161 66.5
arahy.Tifrunner.gnm1.ann1.G8Y61E Arachis hypogaea HOM05D006021 ORTHO05D007747 6.1e-58 228.0 161 66.5
Lj1g0022473 Lotus japonicus HOM05D006021 ORTHO05D007747 6.1e-58 228.0 149 69.1
TWI63G0178 Tripterygium wilfordii HOM05D006021 ORTHO05D007747 6.1e-58 228.0 147 72.8
Phvul.008G012800 Phaseolus vulgaris HOM05D006021 ORTHO05D007747 8.0e-58 227.6 149 69.1
ECA238G0092 Erigeron canadensis HOM05D006021 ORTHO05D007747 1.0e-57 227.3 149 72.5
Gohir.D10G225700 Gossypium hirsutum HOM05D006021 ORTHO05D007747 1.0e-57 227.3 147 71.4
Gohir.A10G216800 Gossypium hirsutum HOM05D006021 ORTHO05D007747 1.4e-57 226.9 147 71.4
Glyma.18G289300 Glycine max HOM05D006021 ORTHO05D007747 2.3e-57 226.1 161 64.0
Lsat_1_v5_gn_2_119720 Lactuca sativa HOM05D006021 ORTHO05D007747 2.3e-57 226.1 184 63.0
PGR044G0630 Punica granatum HOM05D006021 ORTHO05D007747 3.0e-57 225.7 149 71.8
MD01G1126400 Malus domestica HOM05D006021 ORTHO05D007747 5.2e-57 224.9 151 72.8
TPR.G15521 Trifolium pratense HOM05D006021 ORTHO05D007747 6.7e-57 224.6 162 66.7
Hma1.2p1_0683F.1_g202880 Hydrangea macrophylla HOM05D006021 ORTHO05D007747 8.8e-57 224.2 158 72.8
Ca_07253_v3 Cicer arietinum L. HOM05D006021 ORTHO05D007747 5.7e-56 221.5 149 67.8
RcHm_v2.0_Chr1g0366501 Rosa chinensis HOM05D006021 ORTHO05D007747 5.7e-56 221.5 151 71.5
Aa31LG5G20070 Aethionema arabicum HOM05D006021 ORTHO05D007747 9.7e-56 220.7 147 72.1
Gorai.011G256900 Gossypium raimondii HOM05D006021 ORTHO05D007747 1.3e-55 220.3 151 68.9
Medtr7g024540 Medicago truncatula HOM05D006021 ORTHO05D007747 1.3e-55 220.3 162 64.2
AL4G36960 Arabidopsis lyrata HOM05D006021 ORTHO05D007747 1.7e-55 219.9 147 72.1
Lalb_Chr10g0091731 Lupinus albus HOM05D006021 ORTHO05D007747 3.7e-55 218.8 161 64.0
Manes.10G031500 Manihot esculenta HOM05D006021 ORTHO05D007747 3.7e-55 218.8 149 67.8
ClCG09G019960 Citrullus lanatus HOM05D006021 ORTHO05D007747 4.8e-55 218.4 168 64.3
Sabra08G0039300 Salix brachista HOM05D006021 ORTHO05D007747 6.3e-55 218.0 149 68.5
MD07G1196300 Malus domestica HOM05D006021 ORTHO05D007747 8.2e-55 217.6 152 69.7
Potri.008G054500 Populus trichocarpa HOM05D006021 ORTHO05D007747 8.2e-55 217.6 149 68.5
CiPaw.02G183200 Carya illinoinensis HOM05D006021 ORTHO05D007747 1.4e-54 216.9 149 68.5
THA.LOC104824271 Tarenaya hassleriana HOM05D006021 ORTHO05D007747 2.4e-54 216.1 147 70.1
Psat3g181400 Pisum sativum HOM05D006021 ORTHO05D007747 7.0e-54 214.5 149 65.8
BolC4t22421H Brassica oleracea HOM05D006021 ORTHO05D007747 9.1e-54 214.2 147 71.4
QL08p059185 Quercus lobata HOM05D006021 ORTHO05D007747 9.1e-54 214.2 166 63.9
BcaB02g09111 Brassica carinata HOM05D006021 ORTHO05D007747 1.2e-53 213.8 147 71.4
Sp4g21840 Schrenkiella parvula HOM05D006021 ORTHO05D007747 2.0e-53 213.0 147 72.1
BraA05t19650Z Brassica rapa HOM05D006021 ORTHO05D007747 2.6e-53 212.6 149 70.5
FvH4_7g22110 Fragaria vesca HOM05D006021 ORTHO05D007747 2.6e-53 212.6 148 70.3
MELO3C021654.2 Cucumis melo HOM05D006021 ORTHO05D007747 3.5e-53 212.2 147 70.1
CsaV3_5G026490 Cucumis sativus L. HOM05D006021 ORTHO05D007747 4.5e-53 211.8 147 69.4
PSO151G0110 Papaver somniferum HOM05D006021 ORTHO05D007747 4.5e-53 211.8 150 69.3
CARHR134420 Cardamine hirsuta HOM05D006021 ORTHO05D007747 5.9e-53 211.5 145 69.7
FAN01G2389 Fragaria x ananassa HOM05D006021 ORTHO05D007747 5.9e-53 211.5 150 69.3
FAN06G5027 Fragaria x ananassa HOM05D006021 ORTHO05D007747 5.9e-53 211.5 148 69.6
Thhalv10016771m.g Eutrema salsugineum HOM05D006021 ORTHO05D007747 7.7e-53 211.1 147 71.4
BcaC02g12082 Brassica carinata HOM05D006021 ORTHO05D007747 1.0e-52 210.7 147 70.7
A05p06840 Brassica napus HOM05D006021 ORTHO05D007747 1.0e-52 210.7 149 69.8
C04p08110 Brassica napus HOM05D006021 ORTHO05D007747 1.3e-52 210.3 147 70.7
AT2G39550 Arabidopsis thaliana HOM05D006021 ORTHO05D007747 2.2e-52 209.5 147 69.4
FAN10G0846 Fragaria x ananassa HOM05D006021 ORTHO05D007747 3.8e-52 208.8 147 70.1
PSO339G2275 Papaver somniferum HOM05D006021 ORTHO05D007747 3.8e-52 208.8 150 67.3
Carub.0004s2162 Capsella rubella HOM05D006021 ORTHO05D007747 8.5e-52 207.6 148 68.2
Sc20g0002660 Simmondsia chinensis HOM05D006021 ORTHO05D007747 3.2e-51 205.7 149 69.8
Sed0015354 Sechium edule HOM05D006021 ORTHO05D007747 2.7e-50 202.6 147 68.7
Aqoxy2G02096 Aquilegia oxysepala HOM05D006021 ORTHO05D007747 4.7e-50 201.8 151 66.2
EL10Ac2g03391 Beta vulgaris HOM05D006021 ORTHO05D007747 2.3e-49 199.5 149 65.1
Potri.010G206001 Populus trichocarpa HOM05D006021 ORTHO05D007747 2.3e-49 199.5 149 63.8
AUR62041863 Chenopodium quinoa HOM05D006021 ORTHO05D007747 4.0e-49 198.7 149 65.8
FAN03G1562 Fragaria x ananassa HOM05D006021 ORTHO05D007747 5.2e-49 198.4 165 62.4
HPP92_001683 Vanilla planifolia HOM05D006021 ORTHO05D007747 2.8e-47 192.6 149 61.1
Zm00001eb124350 Zea mays HOM05D006021 ORTHO05D007747 1.2e-45 187.2 161 56.5
FAN01G3064 Fragaria x ananassa HOM05D006021 ORTHO05D007747 3.2e-43 179.1 129 70.5
Haze_17048 Corylus avellana HOM05D006021 ORTHO05D007747 7.2e-43 177.9 109 77.1
ATR0559G127 Amborella trichopoda HOM05D006021 ORTHO05D007747 2.1e-42 176.4 149 59.1
Oeu011120.1 Olea europaea HOM05D006021 ORTHO05D007747 7.7e-37 157.9 156 54.5
Ah.16g107030 Amaranthus hybridus HOM05D006021 ORTHO05D007747 5.0e-36 155.2 103 69.9
AagrBONN_evm.TU.Sc2ySwM_362.2940 Anthoceros agrestis HOM05D006021 ORTHO05D007747 1.4e-33 147.1 150 48.0
Pp3c5_25290 Physcomitrium patens HOM05D006021 ORTHO05D007747 4.0e-33 145.6 155 48.4
unitig_736.g22256 Utricularia gibba HOM05D006021 ORTHO05D007747 4.0e-33 145.6 155 54.2
Oeu059724.1 Olea europaea HOM05D006021 ORTHO05D007747 4.4e-32 142.1 88 72.7
SMO116G0097 Selaginella moellendorffii HOM05D006021 ORTHO05D007747 4.6e-29 132.1 124 52.4
FAN06G4047 Fragaria x ananassa HOM05D006021 ORTHO05D007747 2.5e-27 126.3 70 80.0
SHI22569 Sapria himalayana HOM05D006021 ORTHO05D007747 6.1e-26 121.7 198 37.9
CBR_g38952 Chara braunii HOM05D006021 ORTHO05D007747 3.4e-24 115.9 127 48.8
Hund12509 Selenicereus undatus HOM05D006021 ORTHO05D007747 1.1e-22 110.9 90 62.2
AUR62038353 Chenopodium quinoa HOM05D006021 ORTHO05D007747 4.1e-22 109.0 93 60.2
Os01g0150100 Oryza sativa ssp. japonica HOM05D006021 ORTHO05D007747 2.3e-20 103.2 88 54.5
Hund12508 Selenicereus undatus HOM05D006021 ORTHO05D007747 9.5e-19 97.8 59 74.6
CDE09G0613 Ceratophyllum demersum HOM05D006021 ORTHO05D007747 4.7e-18 95.5 90 55.6
Mapoly0010s0084 Marchantia polymorpha HOM05D006021 ORTHO05D007747 5.2e-17 92.0 153 37.3
PSO210G7607 Papaver somniferum HOM05D006021 ORTHO05D007747 4.9e-15 85.5 77 57.1
SEGI_08033 Sequoiadendron giganteum HOM05D006021 ORTHO05D007747 1.0e-12 77.8 95 46.3
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 5.6e-11 72.0 68 58.8
Sabra10G0159200 Salix brachista HOM05D006021 ORTHO05D007747 5.6e-11 72.0 55 60.0
Haze_27246 Corylus avellana HOM05D005049 ORTHO05D006032 9.5e-11 71.2 122 36.1
Pp3c14_3780 Physcomitrium patens HOM05D005049 ORTHO05D006032 8.1e-10 68.2 103 35.0
SMO172G0207 Selaginella moellendorffii HOM05D005049 ORTHO05D006032 1.1e-09 67.8 103 34.0
arahy.Tifrunner.gnm1.ann1.GL6ZL4 Arachis hypogaea HOM05D006021 ORTHO05D007747 5.2e-09 65.5 33 81.8
AagrBONN_evm.TU.Sc2ySwM_117.2022 Anthoceros agrestis HOM05D005049 ORTHO05D006032 4.4e-08 62.4 102 34.3
CDE09G0041 Ceratophyllum demersum HOM05D006021 ORTHO05D007747 5.8e-08 62.0 37 67.6
Duzib264G0847 Durio zibethinus HOM05D005049 ORTHO05D006032 5.8e-08 62.0 102 33.3
Eucgr.I01812 Eucalyptus grandis HOM05D005049 ORTHO05D006032 9.9e-08 61.2 102 33.3
Hma1.2p1_0858F.1_g229450 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 9.9e-08 61.2 102 33.3
PGR142G2968 Punica granatum HOM05D005049 ORTHO05D006032 9.9e-08 61.2 121 30.6
arahy.Tifrunner.gnm1.ann1.EYLE23 Arachis hypogaea HOM05D005049 ORTHO05D006032 1.3e-07 60.8 105 32.4
Thecc.04G008900 Theobroma cacao HOM05D005049 ORTHO05D006032 1.3e-07 60.8 108 32.4
CANSAT64G0408 Cannabis sativa HOM05D005049 ORTHO05D006032 1.7e-07 60.5 159 28.9
CBR_g12691 Chara braunii HOM05D005049 ORTHO05D006032 1.7e-07 60.5 121 30.6
TPR.G2274 Trifolium pratense HOM05D005049 ORTHO05D006032 1.7e-07 60.5 102 32.4
Atru.chr6.2298 Acer truncatum HOM05D005049 ORTHO05D006032 2.2e-07 60.1 120 32.5
Lj2g0009991 Lotus japonicus HOM05D005049 ORTHO05D006032 2.2e-07 60.1 102 33.3
Ca_04197_v3 Cicer arietinum L. HOM05D005049 ORTHO05D006032 2.9e-07 59.7 102 33.3
Duzib147G1079 Durio zibethinus HOM05D005049 ORTHO05D006032 2.9e-07 59.7 102 33.3
VMungo0464G1607 Vigna mungo HOM05D005049 ORTHO05D006032 2.9e-07 59.7 102 33.3
arahy.Tifrunner.gnm1.ann1.41NV30 Arachis hypogaea HOM05D005049 ORTHO05D006032 3.7e-07 59.3 102 32.4
arahy.Tifrunner.gnm1.ann1.B7LRKU Arachis hypogaea HOM05D005049 ORTHO05D006032 3.7e-07 59.3 102 32.4
MD09G1034200 Malus domestica HOM05D005049 ORTHO05D006032 3.7e-07 59.3 122 30.3
Gohir.A09G026200 Gossypium hirsutum HOM05D005049 ORTHO05D006032 4.9e-07 58.9 102 32.4
Gohir.D09G025601 Gossypium hirsutum HOM05D005049 ORTHO05D006032 4.9e-07 58.9 102 32.4
Nn4g22794 Nelumbo nucifera HOM05D005049 ORTHO05D006032 4.9e-07 58.9 102 33.3
Prupe.6G347800 Prunus persica HOM05D005049 ORTHO05D006032 4.9e-07 58.9 102 31.4
Carub.0007s3535 Capsella rubella HOM05D005049 ORTHO05D006032 8.4e-07 58.2 159 29.6
FvH4_6g50640 Fragaria vesca HOM05D005049 ORTHO05D006032 8.4e-07 58.2 102 32.4
Glyma.13G168600 Glycine max HOM05D005049 ORTHO05D006032 8.4e-07 58.2 102 31.4
FAN14G5348 Fragaria x ananassa HOM05D005049 ORTHO05D006032 1.1e-06 57.8 102 32.4
Medtr6g007165 Medicago truncatula HOM05D005049 ORTHO05D006032 1.1e-06 57.8 102 31.4
Psat1g056840 Pisum sativum HOM05D005049 ORTHO05D006032 1.1e-06 57.8 102 32.4
Prupe.3G284100 Prunus persica HOM05D005049 ORTHO05D006032 1.1e-06 57.8 102 32.4
THA.LOC104805397 Tarenaya hassleriana HOM05D005049 ORTHO05D006032 1.1e-06 57.8 102 33.3
EL10Ac2g02398 Beta vulgaris HOM05D005049 ORTHO05D006032 1.4e-06 57.4 102 33.3
Eucgr.G01411 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.4e-06 57.4 102 33.3
Gorai.006G029800 Gossypium raimondii HOM05D005049 ORTHO05D006032 1.4e-06 57.4 102 31.4
Phvul.004G014500 Phaseolus vulgaris HOM05D005049 ORTHO05D006032 1.4e-06 57.4 120 31.7
Sc07g0003030 Simmondsia chinensis HOM05D005049 ORTHO05D006032 1.4e-06 57.4 102 32.4
AT5G40280 Arabidopsis thaliana HOM05D005049 ORTHO05D006032 1.9e-06 57.0 102 33.3
Cpa.g.sc39.89 Carica papaya HOM05D005049 ORTHO05D006032 1.9e-06 57.0 102 32.4
Ciclev10015290m.g Citrus clementina HOM05D005049 ORTHO05D006032 1.9e-06 57.0 102 31.4
CiPaw.03G037900 Carya illinoinensis HOM05D005049 ORTHO05D006032 2.4e-06 56.6 102 31.4
Haze_14669 Corylus avellana HOM05D005049 ORTHO05D006032 2.4e-06 56.6 102 30.4
Dinv35060 Davidia involucrata HOM05D005049 ORTHO05D006032 2.4e-06 56.6 117 31.6
RcHm_v2.0_Chr2g0171441 Rosa chinensis HOM05D005049 ORTHO05D006032 2.4e-06 56.6 102 32.4
A04p15750 Brassica napus HOM05D005049 ORTHO05D006032 3.2e-06 56.2 155 28.4
BraA04t17209Z Brassica rapa HOM05D005049 ORTHO05D006032 3.2e-06 56.2 155 28.4
Cfa007428 Carpinus fangiana HOM05D005049 ORTHO05D006032 3.2e-06 56.2 102 30.4
MD17G1034700 Malus domestica HOM05D005049 ORTHO05D006032 3.2e-06 56.2 120 30.8
Mapoly0123s0027 Marchantia polymorpha HOM05D005049 ORTHO05D006032 3.2e-06 56.2 102 30.4
unitig_8.g4953 Utricularia gibba HOM05D003773 ORTHO05D004377 4.1e-06 55.8 68 41.2
Aa31LG9G1340 Aethionema arabicum HOM05D005049 ORTHO05D006032 5.4e-06 55.5 159 28.9
ATR0730G137 Amborella trichopoda HOM05D005049 ORTHO05D006032 5.4e-06 55.5 102 32.4
Sed0008163 Sechium edule HOM05D005049 ORTHO05D006032 5.4e-06 55.5 102 31.4
Ah.11g045070 Amaranthus hybridus HOM05D005049 ORTHO05D006032 7.1e-06 55.1 102 33.3
Lj7A514T33 Lonicera japonica HOM05D005049 ORTHO05D006032 7.1e-06 55.1 102 31.4
Migut.H00120 Erythranthe guttata HOM05D005049 ORTHO05D006032 9.2e-06 54.7 102 29.4
Glyma.06G185500 Glycine max HOM05D005049 ORTHO05D006032 9.2e-06 54.7 102 31.4
Lalb_Chr02g0160341 Lupinus albus HOM05D005049 ORTHO05D006032 9.2e-06 54.7 102 29.4
TAR622G0573 Trochodendron aralioides HOM05D005049 ORTHO05D006032 9.2e-06 54.7 102 31.4


User provided reference genes

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