Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 1.1e-201 706.4 351 100.0
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 9.7e-171 603.6 351 84.9
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.8e-169 599.4 357 84.6
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 1.4e-166 589.7 336 86.9
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 1.2e-165 586.6 336 85.1
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 1.2e-165 586.6 355 80.8
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 1.6e-165 586.3 355 80.8
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 2.1e-165 585.9 356 81.7
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 2.7e-165 585.5 358 83.5
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 6.1e-165 584.3 342 83.9
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 6.1e-165 584.3 351 82.9
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 1.8e-164 582.8 355 80.6
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 5.2e-164 581.3 348 81.3
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 8.8e-164 580.5 350 80.6
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 2.0e-163 579.3 350 80.3
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 7.4e-163 577.4 335 83.9
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 9.7e-163 577.0 337 83.7
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 9.7e-163 577.0 348 82.2
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 9.7e-163 577.0 348 82.2
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 1.7e-162 576.2 346 82.9
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 2.8e-162 575.5 324 86.4
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 8.2e-162 573.9 325 85.2
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 1.1e-161 573.5 343 81.6
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 1.1e-161 573.5 339 82.6
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 1.8e-161 572.8 342 81.9
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 3.1e-161 572.0 345 82.3
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 4.1e-161 571.6 357 79.0
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 5.3e-161 571.2 346 82.1
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 7.0e-161 570.9 343 81.3
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 1.2e-160 570.1 329 83.9
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 2.6e-160 568.9 343 81.3
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 3.5e-160 568.5 351 79.2
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 4.5e-160 568.2 343 81.6
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 5.9e-160 567.8 345 82.0
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 1.7e-159 566.2 340 80.6
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 1.7e-159 566.2 331 84.9
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 2.9e-159 565.5 327 83.8
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 2.9e-159 565.5 324 84.9
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 3.8e-159 565.1 325 84.0
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 3.8e-159 565.1 352 79.5
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 3.8e-159 565.1 324 84.9
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 3.8e-159 565.1 352 81.0
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 5.0e-159 564.7 351 80.1
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 5.0e-159 564.7 335 81.5
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 8.5e-159 563.9 322 85.1
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 1.1e-158 563.5 329 82.7
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 1.5e-158 563.1 334 82.3
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 1.9e-158 562.8 355 78.0
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 3.2e-158 562.0 324 84.0
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 3.2e-158 562.0 351 79.2
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 3.2e-158 562.0 324 84.6
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 5.5e-158 561.2 333 83.8
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 7.2e-158 560.8 352 79.0
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 9.4e-158 560.5 341 81.2
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 9.4e-158 560.5 326 83.4
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 1.6e-157 559.7 331 83.7
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 2.1e-157 559.3 330 84.8
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 2.1e-157 559.3 353 76.5
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 2.7e-157 558.9 351 77.8
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 1.4e-156 556.6 341 79.2
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 3.0e-156 555.4 348 79.6
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 4.0e-156 555.1 320 83.8
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 5.2e-156 554.7 320 84.1
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 5.2e-156 554.7 351 78.6
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 6.7e-156 554.3 349 76.8
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 6.7e-156 554.3 362 76.8
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 8.8e-156 553.9 328 80.8
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 1.2e-155 553.5 351 76.9
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 2.0e-155 552.7 320 83.8
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 2.0e-155 552.7 320 83.4
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 7.0e-153 544.3 351 77.2
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 3.8e-151 538.5 325 78.8
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 6.1e-149 531.2 342 75.7
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 8.0e-149 530.8 327 77.4
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 1.0e-148 530.4 326 77.3
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 5.2e-148 528.1 350 78.0
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 8.8e-148 527.3 312 84.3
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 3.4e-147 525.4 300 86.3
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 4.4e-147 525.0 325 77.2
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 5.7e-147 524.6 332 76.2
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 5.7e-147 524.6 339 77.9
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 1.3e-146 523.5 339 77.6
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 6.3e-146 521.2 331 76.1
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 1.1e-145 520.4 331 76.1
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 1.8e-145 519.6 329 76.3
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 1.8e-145 519.6 324 77.2
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 2.4e-145 519.2 351 74.6
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 4.1e-145 518.5 331 75.8
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 2.7e-144 515.8 340 75.0
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 5.9e-144 514.6 346 73.1
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 1.7e-143 513.1 323 77.1
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 6.6e-143 511.1 351 71.5
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.0e-140 503.8 305 80.7
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 1.2e-139 500.4 294 83.0
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 1.2e-139 500.4 304 80.6
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 7.0e-137 491.1 330 72.4
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 1.0e-135 487.3 362 65.7
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 1.1e-134 483.8 358 71.2
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 2.3e-132 476.1 365 67.9
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 4.0e-132 475.3 289 79.6
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 3.7e-130 468.8 319 75.5
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 8.3e-130 467.6 267 84.3
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 2.4e-129 466.1 255 87.1
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 4.1e-129 465.3 267 83.9
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 6.6e-127 458.0 265 82.6
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 4.0e-124 448.7 300 75.7
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.7e-119 433.3 267 78.3
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 4.3e-118 428.7 227 93.0
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 7.6e-115 417.9 232 86.2
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 1.2e-109 400.6 329 61.7
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 1.2e-107 394.0 328 59.8
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 3.9e-103 379.0 336 57.1
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 5.3e-84 315.5 297 55.2
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 5.8e-83 312.0 207 75.8
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 5.1e-79 298.9 275 60.4
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 5.1e-79 298.9 213 65.3
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.1e-76 291.2 177 79.7
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 1.3e-66 257.7 145 84.8
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 1.4e-65 254.2 212 60.4
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 8.2e-61 238.4 217 61.8
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 6.7e-55 218.8 331 45.3
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 1.5e-54 217.6 248 48.4
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 2.6e-51 206.8 315 38.7
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 3.5e-51 206.5 199 55.8
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 1.6e-43 181.0 355 34.9
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 8.5e-42 175.3 114 75.4
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 1.5e-38 164.5 234 46.6
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 7.5e-38 162.2 125 64.8
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 1.3e-37 161.4 328 35.1
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 9.8e-22 108.6 57 91.2
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 7.8e-19 99.0 250 32.0
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 1.0e-18 98.6 98 54.1
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 1.5e-14 84.7 45 88.9
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 2.0e-14 84.3 78 55.1
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 4.9e-13 79.7 55 70.9
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 2.8e-08 63.9 47 68.1
Nitab4.5_0016721g0010 Nicotiana tabacum HOM05D002908 ORTHO05D283189 4.7e-08 63.2 83 55.4
Solyc12g027700.1 Solanum lycopersicum HOM05D002908 ORTHO05D050692 5.2e-07 59.7 30 83.3


User provided reference genes

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