Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29840 Davidia involucrata HOM05D006432 ORTHO05D008257 1.5e-107 392.9 208 100.0
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 9.7e-86 320.5 206 86.9
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 9.8e-62 240.7 206 70.4
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.3e-61 240.4 220 69.5
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 1.3e-61 240.4 206 69.9
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 8.3e-61 237.7 207 66.7
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 2.4e-60 236.1 212 68.4
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 2.4e-60 236.1 207 70.0
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 2.4e-60 236.1 207 66.2
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 2.4e-60 236.1 207 66.2
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 5.4e-60 235.0 174 71.8
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 7.0e-60 234.6 203 66.5
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 1.6e-59 233.4 206 65.0
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 3.5e-59 232.3 206 69.4
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 4.5e-59 231.9 206 63.1
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 1.3e-58 230.3 165 77.0
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 1.7e-58 229.9 206 65.5
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 1.7e-58 229.9 207 63.3
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 2.3e-58 229.6 200 67.0
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 3.8e-58 228.8 207 67.1
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 5.0e-58 228.4 206 62.6
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 6.6e-58 228.0 212 65.6
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 1.1e-57 227.3 155 75.5
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 1.9e-57 226.5 178 68.0
Sabra08G0128900 Salix brachista HOM05D006432 ORTHO05D008257 3.3e-57 225.7 203 64.5
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 7.3e-57 224.6 155 74.2
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 7.3e-57 224.6 155 74.2
MD16G1221800 Malus domestica HOM05D006432 ORTHO05D008257 7.3e-57 224.6 210 65.2
Potri.008G169100 Populus trichocarpa HOM05D006432 ORTHO05D008257 1.2e-56 223.8 202 63.9
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 2.1e-56 223.0 206 63.1
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 3.6e-56 222.2 195 65.6
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 4.7e-56 221.9 205 64.4
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 6.1e-56 221.5 218 61.0
Oeu059409.1 Olea europaea HOM05D006432 ORTHO05D008257 8.0e-56 221.1 191 64.9
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 1.0e-55 220.7 187 65.2
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 1.4e-55 220.3 218 63.3
Nn1g02871 Nelumbo nucifera HOM05D006432 ORTHO05D008257 5.2e-55 218.4 221 61.1
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 6.8e-55 218.0 211 62.1
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 8.9e-55 217.6 218 60.6
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 8.9e-55 217.6 209 62.7
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 1.5e-54 216.9 208 63.0
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 2.6e-54 216.1 207 59.9
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 7.5e-54 214.5 207 60.9
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 9.8e-54 214.2 212 59.4
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 9.8e-54 214.2 160 71.2
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 9.8e-54 214.2 206 60.2
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 2.2e-53 213.0 235 54.9
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 3.7e-53 212.2 209 62.7
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 4.9e-53 211.8 210 61.0
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 4.9e-53 211.8 209 62.2
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 4.9e-53 211.8 208 62.0
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 4.9e-53 211.8 212 58.5
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 6.4e-53 211.5 209 60.8
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 1.4e-52 210.3 139 77.7
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 7.0e-52 208.0 187 63.6
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 1.2e-51 207.2 118 85.6
Medtr1g075660 Medicago truncatula HOM05D006432 ORTHO05D008257 1.2e-51 207.2 207 58.0
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 2.7e-51 206.1 144 72.9
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 2.7e-51 206.1 207 58.0
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 3.5e-51 205.7 208 61.5
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 4.6e-51 205.3 118 83.1
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 6.0e-51 204.9 137 75.9
Psat6g122560 Pisum sativum HOM05D006432 ORTHO05D008257 6.0e-51 204.9 204 59.8
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 7.8e-51 204.5 211 58.8
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 1.7e-50 203.4 209 58.4
CDE04G3487 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 1.7e-50 203.4 205 57.6
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 2.3e-50 203.0 113 88.5
Lj5g0003574 Lotus japonicus HOM05D006432 ORTHO05D008257 2.3e-50 203.0 213 59.6
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 3.0e-50 202.6 204 59.3
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 5.0e-50 201.8 149 69.8
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 5.0e-50 201.8 198 60.1
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 6.6e-50 201.4 152 67.8
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 6.6e-50 201.4 165 65.5
AL3G38060 Arabidopsis lyrata HOM05D006432 ORTHO05D008257 8.6e-50 201.1 205 57.6
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 1.5e-49 200.3 209 57.4
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 2.5e-49 199.5 107 86.9
Zm00001eb114860 Zea mays HOM05D006432 ORTHO05D008257 2.5e-49 199.5 123 78.0
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 4.3e-49 198.7 210 57.1
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 4.3e-49 198.7 107 87.9
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 7.3e-49 198.0 209 56.9
Os11g0595200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 7.3e-49 198.0 120 78.3
PSO017G5682 Papaver somniferum HOM05D006432 ORTHO05D008257 7.3e-49 198.0 206 55.3
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 1.2e-48 197.2 207 56.0
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 1.2e-48 197.2 107 85.0
Aqoxy5G00185 Aquilegia oxysepala HOM05D006432 ORTHO05D008257 2.1e-48 196.4 208 56.7
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 2.1e-48 196.4 214 56.5
AT3G23400 Arabidopsis thaliana HOM05D006432 ORTHO05D008257 2.8e-48 196.1 205 57.6
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 8.0e-48 194.5 149 65.8
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 2.3e-47 193.0 219 55.3
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 5.2e-47 191.8 198 56.1
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 5.2e-47 191.8 110 84.5
PSO478G2331 Papaver somniferum HOM05D006432 ORTHO05D008257 6.8e-47 191.4 206 54.4
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 1.5e-46 190.3 109 84.4
ATR0582G319 Amborella trichopoda HOM05D006432 ORTHO05D008257 1.9e-44 183.3 111 82.0
Cpa.g.sc44.33 Carica papaya HOM05D006432 ORTHO05D008257 1.2e-43 180.6 177 62.7
BcaB05g22938 Brassica carinata HOM05D006432 ORTHO05D008257 1.3e-37 160.6 179 54.2
FvH4_4g04000 Fragaria vesca HOM05D003789 ORTHO05D004158 1.7e-37 160.2 195 55.4
SEGI_38471 Sequoiadendron giganteum HOM05D006432 ORTHO05D008257 4.1e-36 155.6 122 61.5
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 1.6e-35 153.7 194 44.8
Phvul.010G070111 Phaseolus vulgaris HOM05D006432 ORTHO05D008257 2.3e-34 149.8 141 65.2
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 3.0e-34 149.4 208 48.1
Glyma.10G182900 Glycine max HOM05D006432 ORTHO05D008257 5.1e-34 148.7 82 85.4
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 6.6e-34 148.3 174 48.9
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 3.6e-32 142.5 113 55.8
Nn1g02875 Nelumbo nucifera HOM05D006432 ORTHO05D008257 1.4e-28 130.6 83 83.1
CBR_g30839 Chara braunii HOM05D006432 ORTHO05D008257 1.6e-27 127.1 113 51.3
Mapoly0012s0134 Marchantia polymorpha HOM05D006432 ORTHO05D008257 8.7e-26 121.3 112 52.7
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 6.9e-23 111.7 90 65.6
Cre02.g143667 Chlamydomonas reinhardtii HOM05D006432 ORTHO05D008257 2.7e-19 99.8 131 42.7
Os05g0304200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 8.7e-10 68.2 58 60.3
MCO05G338 Micromonas commoda HOM05D006432 ORTHO05D008257 5.6e-09 65.5 112 35.7
Cpa.g.sc44.36 Carica papaya HOM05D006432 ORTHO05D008257 2.1e-08 63.5 29 89.7
CAN.G345.5 Capsicum annuum HOM05D006432 ORTHO05D008257 6.2e-08 62.0 50 64.0
BcaB01g01688 Brassica carinata HOM05D006432 ORTHO05D008257 8.1e-08 61.6 31 80.6
SGA_v2.0_scaffold43G16214 Striga asiatica HOM05D006432 ORTHO05D008257 1.8e-07 60.5 28 89.3
arahy.Tifrunner.gnm1.ann1.508QQU Arachis hypogaea HOM05D006432 ORTHO05D008257 3.1e-07 59.7 28 85.7
arahy.Tifrunner.gnm1.ann1.X8C4EZ Arachis hypogaea HOM05D006432 ORTHO05D008257 3.1e-07 59.7 28 85.7
BcaB04g17238 Brassica carinata HOM05D006432 ORTHO05D008257 3.1e-07 59.7 54 57.4
CDE03G0089 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 4.0e-07 59.3 27 92.6
BcaB02g08931 Brassica carinata HOM05D006432 ORTHO05D008257 6.9e-07 58.5 28 82.1
Sabra10G0037800 Salix brachista HOM05D006432 ORTHO05D008257 1.5e-06 57.4 30 80.0
Nitab4.5_0002064g0060 Nicotiana tabacum HOM05D005663 ORTHO05D007258 2.6e-06 56.6 155 28.4
PRCOL_00002195 Prasinoderma coloniale HOM05D006432 ORTHO05D008257 2.6e-06 56.6 129 34.9


User provided reference genes

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