Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29814 Davidia involucrata HOM05D008048 ORTHO05D010199 3.3e-153 545.0 279 100.0
Hma1.2p1_0385F.1_g141480 Hydrangea macrophylla HOM05D008048 ORTHO05D010199 1.3e-112 410.2 254 81.1
Actinidia20832 Actinidia chinensis HOM05D008048 ORTHO05D010199 1.9e-108 396.4 255 80.8
TAR362G0870 Trochodendron aralioides HOM05D008048 ORTHO05D010199 6.2e-104 381.3 253 74.7
Haze_11446 Corylus avellana HOM05D008048 ORTHO05D010199 1.3e-96 357.1 253 71.5
Cfa014771 Carpinus fangiana HOM05D008048 ORTHO05D010199 2.1e-96 356.3 267 69.3
Nn1g02915 Nelumbo nucifera HOM05D008048 ORTHO05D010199 2.4e-95 352.8 267 67.8
RcHm_v2.0_Chr4g0394961 Rosa chinensis HOM05D008048 ORTHO05D010199 7.6e-94 347.8 254 67.3
QL06p020732 Quercus lobata HOM05D008048 ORTHO05D010199 1.0e-93 347.4 252 69.4
Lsat_1_v5_gn_6_68700 Lactuca sativa HOM05D008048 ORTHO05D010199 1.9e-92 343.2 255 66.3
Atru.chr4.1935 Acer truncatum HOM05D008048 ORTHO05D010199 6.0e-91 338.2 253 65.6
Prupe.1G046300 Prunus persica HOM05D008048 ORTHO05D010199 3.9e-90 335.5 253 68.0
MD16G1225000 Malus domestica HOM05D008048 ORTHO05D010199 1.9e-89 333.2 244 67.2
COL.COLO4_15948 Corchorus olitorius HOM05D008048 ORTHO05D010199 2.5e-89 332.8 261 64.8
Aqoxy5G00167 Aquilegia oxysepala HOM05D008048 ORTHO05D010199 5.7e-89 331.6 263 65.0
MD13G1219500 Malus domestica HOM05D008048 ORTHO05D010199 1.3e-88 330.5 254 65.7
MELO3C023035.2 Cucumis melo HOM05D008048 ORTHO05D010199 4.8e-88 328.6 260 63.5
MSTRG.4161 Avicennia marina HOM05D008048 ORTHO05D010199 3.1e-87 325.9 255 62.4
CsaV3_2G012520 Cucumis sativus L. HOM05D008048 ORTHO05D010199 9.0e-87 324.3 260 63.1
Ciclev10005562m.g Citrus clementina HOM05D008048 ORTHO05D010199 2.0e-86 323.2 253 63.2
Sed0019169 Sechium edule HOM05D008048 ORTHO05D010199 7.6e-86 321.2 253 64.0
Migut.G00487 Erythranthe guttata HOM05D008048 ORTHO05D010199 1.0e-85 320.9 255 61.6
Sc25g0003600 Simmondsia chinensis HOM05D008048 ORTHO05D010199 7.2e-84 314.7 254 59.1
FvH4_4g04390 Fragaria vesca HOM05D008048 ORTHO05D010199 9.3e-84 314.3 261 63.2
FAN17G0666 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.1e-83 313.2 255 63.5
Psat6g106440 Pisum sativum HOM05D008048 ORTHO05D010199 6.1e-83 311.6 256 62.9
MBI07_g18713_MAGBIO Magnolia biondii HOM05D008048 ORTHO05D010199 1.0e-82 310.8 253 61.7
FAN22G2321 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.5e-81 307.0 253 62.5
TPR.G28751 Trifolium pratense HOM05D008048 ORTHO05D010199 1.5e-81 307.0 266 60.2
Duzib151G0082 Durio zibethinus HOM05D008048 ORTHO05D010199 9.7e-81 304.3 253 60.5
Lalb_Chr19g0128481 Lupinus albus HOM05D008048 ORTHO05D010199 9.7e-81 304.3 256 60.9
AUR62002183 Chenopodium quinoa HOM05D008048 ORTHO05D010199 2.2e-80 303.1 275 57.8
Peaxi162Scf00033g00292 Petunia axillaris HOM05D008048 ORTHO05D010199 2.2e-80 303.1 253 59.3
Rhsim04G0173500 Rhododendron simsii HOM05D008048 ORTHO05D010199 2.2e-80 303.1 206 75.2
SGA_v2.0_scaffold67G22704 Striga asiatica HOM05D008048 ORTHO05D010199 8.2e-80 301.2 227 66.5
Ah.04g155360 Amaranthus hybridus HOM05D008048 ORTHO05D010199 1.8e-79 300.1 253 58.9
Manes.15G044600 Manihot esculenta HOM05D008048 ORTHO05D010199 1.8e-79 300.1 254 58.7
PGSC0003DMG400017154 Solanum tuberosum HOM05D008048 ORTHO05D010199 3.1e-79 299.3 253 59.3
SalBow3G4414 Salvia bowleyana HOM05D008048 ORTHO05D010199 3.4e-78 295.8 254 61.0
TWI73G0695 Tripterygium wilfordii HOM05D008048 ORTHO05D010199 5.0e-77 292.0 260 60.4
Sabra10G0040500 Salix brachista HOM05D008048 ORTHO05D010199 6.5e-77 291.6 255 59.2
Medtr1g045060 Medicago truncatula HOM05D008048 ORTHO05D010199 8.5e-77 291.2 256 59.0
Potri.010G067000 Populus trichocarpa HOM05D008048 ORTHO05D010199 8.5e-77 291.2 255 59.2
Sopen09g033500 Solanum pennellii HOM05D008048 ORTHO05D010199 8.5e-77 291.2 253 58.1
Thecc.04G262100 Theobroma cacao HOM05D008048 ORTHO05D010199 1.4e-76 290.4 223 64.6
Sabra08G0130700 Salix brachista HOM05D008048 ORTHO05D010199 4.2e-76 288.9 262 57.6
Phvul.007G271100 Phaseolus vulgaris HOM05D008048 ORTHO05D010199 5.5e-76 288.5 255 59.2
VMungo0720G0410 Vigna mungo HOM05D008048 ORTHO05D010199 5.5e-76 288.5 255 57.3
Lj6g0004811 Lotus japonicus HOM05D008048 ORTHO05D010199 7.2e-76 288.1 254 60.2
CAN.G220.87 Capsicum annuum HOM05D008048 ORTHO05D010199 9.4e-76 287.7 253 55.3
Potri.008G170900 Populus trichocarpa HOM05D008048 ORTHO05D010199 1.2e-75 287.3 255 58.8
PGR004G1266 Punica granatum HOM05D008048 ORTHO05D010199 1.2e-75 287.3 260 60.0
Gorai.002G026300 Gossypium raimondii HOM05D008048 ORTHO05D010199 3.9e-74 282.3 262 55.0
Gohir.A01G025700 Gossypium hirsutum HOM05D008048 ORTHO05D010199 2.0e-73 280.0 262 54.6
Gohir.D01G023415 Gossypium hirsutum HOM05D008048 ORTHO05D010199 1.7e-72 276.9 262 54.6
Nitab4.5_0002709g0050 Nicotiana tabacum HOM05D008048 ORTHO05D010199 7.7e-70 268.1 373 43.2
Glyma.20G086000 Glycine max HOM05D008048 ORTHO05D010199 5.0e-61 238.8 255 52.5
Oeu002289.1 Olea europaea HOM05D008048 ORTHO05D010199 3.2e-60 236.1 193 62.7
CiPaw.02G108000 Carya illinoinensis HOM05D008048 ORTHO05D010199 2.7e-59 233.0 253 54.2
Cpa.g.sc44.13 Carica papaya HOM05D008048 ORTHO05D010199 1.7e-56 223.8 182 59.9
GSVIVG01027901001 Vitis vinifera HOM05D008048 ORTHO05D010199 4.7e-51 205.7 171 63.2
DCAR_027338 Daucus carota HOM05D008048 ORTHO05D010199 6.1e-43 178.7 164 54.9
Solyc09g090560.2 Solanum lycopersicum HOM05D008048 ORTHO05D010199 1.0e-42 177.9 147 61.2
Lj6P622T54 Lonicera japonica HOM05D008048 ORTHO05D010199 1.3e-40 171.0 123 72.4
FAN12G1007 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.8e-34 150.6 108 69.4
FAN12G3146 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.8e-34 150.6 108 69.4
ATR0736G121 Amborella trichopoda HOM05D008048 ORTHO05D010199 1.2e-33 147.9 137 54.7
CAN.G220.88 Capsicum annuum HOM05D008048 ORTHO05D010199 5.7e-33 145.6 137 54.0
FAN12G0723 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.9e-32 143.3 118 64.4
FAN12G2845 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.9e-32 143.3 118 64.4
SEGI_38415 Sequoiadendron giganteum HOM05D007245 ORTHO05D009049 2.5e-28 130.2 266 32.3
Mapoly0103s0043 Marchantia polymorpha HOM05D007245 ORTHO05D009049 2.2e-24 117.1 269 31.2
TAR365G0106 Trochodendron aralioides HOM05D008048 ORTHO05D010199 4.6e-22 109.4 110 52.7
Pp3c8_3270 Physcomitrium patens HOM05D007245 ORTHO05D009049 3.0e-21 106.7 264 28.4
SMO329G0038 Selaginella moellendorffii HOM05D007245 ORTHO05D009049 5.0e-21 105.9 256 28.9
CiPaw.03G000500 Carya illinoinensis HOM05D007245 ORTHO05D009049 1.9e-20 104.0 248 31.0
Thecc.04G050800 Theobroma cacao HOM05D007245 ORTHO05D009049 1.9e-20 104.0 266 28.2
PGSC0003DMG400030518 Solanum tuberosum HOM05D007245 ORTHO05D009049 3.3e-20 103.2 263 27.4
AagrBONN_evm.TU.Sc2ySwM_369.440 Anthoceros agrestis HOM05D007245 ORTHO05D009049 9.5e-20 101.7 284 30.6
Gohir.D11G065900 Gossypium hirsutum HOM05D007245 ORTHO05D009049 2.1e-19 100.5 258 28.7
Gorai.007G071400 Gossypium raimondii HOM05D007245 ORTHO05D009049 2.8e-19 100.1 253 28.1
Nn3g16217 Nelumbo nucifera HOM05D007245 ORTHO05D009049 2.8e-19 100.1 267 27.7
Duzib147G1224 Durio zibethinus HOM05D007245 ORTHO05D009049 3.6e-19 99.8 266 28.2
Gohir.A11G062100 Gossypium hirsutum HOM05D007245 ORTHO05D009049 3.6e-19 99.8 253 28.1
Sopen05g004430 Solanum pennellii HOM05D007245 ORTHO05D009049 3.6e-19 99.8 257 27.2
CAN.G1489.19 Capsicum annuum HOM05D007245 ORTHO05D009049 4.7e-19 99.4 268 25.4
ATR0582G351 Amborella trichopoda HOM05D007245 ORTHO05D009049 6.2e-19 99.0 264 27.3
Thhalv10014197m.g Eutrema salsugineum HOM05D007245 ORTHO05D009049 6.2e-19 99.0 258 26.7
Manes.11G073800 Manihot esculenta HOM05D007245 ORTHO05D009049 6.2e-19 99.0 252 27.8
TAR374G0050 Trochodendron aralioides HOM05D000179 ORTHO05D009049 8.1e-19 98.6 251 28.3
EL10Ac3g04955 Beta vulgaris HOM05D008048 ORTHO05D010199 1.8e-18 97.4 80 60.0
Aa31LG11G15470 Aethionema arabicum HOM05D007245 ORTHO05D009049 2.3e-18 97.1 261 27.6
unitig_0.g2407 Utricularia gibba HOM05D007245 ORTHO05D009049 2.3e-18 97.1 233 29.2
TAR629G1424 Trochodendron aralioides HOM05D007245 ORTHO05D009049 3.1e-18 96.7 269 26.4
PSO478G0086 Papaver somniferum HOM05D007245 ORTHO05D009049 4.0e-18 96.3 257 29.6
Sed0008898 Sechium edule HOM05D007245 ORTHO05D009049 5.2e-18 95.9 264 25.4
THA.LOC104822428 Tarenaya hassleriana HOM05D007245 ORTHO05D009049 5.2e-18 95.9 255 27.8
Hma1.2p1_0421F.1_g149920 Hydrangea macrophylla HOM05D007245 ORTHO05D009049 8.9e-18 95.1 254 27.2
PSO017G6414 Papaver somniferum HOM05D007245 ORTHO05D009049 8.9e-18 95.1 261 28.4
CARHR199540 Cardamine hirsuta HOM05D007245 ORTHO05D009049 1.2e-17 94.7 265 24.9
Dinv25610 Davidia involucrata HOM05D007245 ORTHO05D009049 1.2e-17 94.7 262 27.1
Dinv33262 Davidia involucrata HOM05D007245 ORTHO05D009049 2.6e-17 93.6 263 26.2
Cpa.g.sc70.41 Carica papaya HOM05D007245 ORTHO05D009049 3.4e-17 93.2 264 26.5
Oeu050155.1 Olea europaea HOM05D007245 ORTHO05D009049 3.4e-17 93.2 265 26.4
SGA_v2.0_scaffold47G17641 Striga asiatica HOM05D007245 ORTHO05D009049 4.4e-17 92.8 274 26.3
Haze_14957 Corylus avellana HOM05D007245 ORTHO05D009049 5.8e-17 92.4 265 26.8
C09p63210 Brassica napus HOM05D007245 ORTHO05D009049 7.5e-17 92.0 256 26.6
BolC9t59157H Brassica oleracea HOM05D007245 ORTHO05D009049 7.5e-17 92.0 256 26.6
Pp3c10_19560 Physcomitrium patens HOM05D007245 ORTHO05D009049 9.9e-17 91.7 268 29.1
BcaC04g19069 Brassica carinata HOM05D007245 ORTHO05D009049 1.3e-16 91.3 256 26.6
A10p24470 Brassica napus HOM05D007245 ORTHO05D009049 1.7e-16 90.9 258 26.0
BcaC04g24245 Brassica carinata HOM05D007245 ORTHO05D009049 2.2e-16 90.5 259 26.6
BraA10t44512Z Brassica rapa HOM05D007245 ORTHO05D009049 2.9e-16 90.1 258 25.6
Potri.002G237200 Populus trichocarpa HOM05D007245 ORTHO05D009049 2.9e-16 90.1 254 26.8
Ah.03g136550 Amaranthus hybridus HOM05D001378 ORTHO05D001249 3.7e-16 89.7 246 27.6
HanXRQChr09g0245251 Helianthus annuus HOM05D007245 ORTHO05D009049 6.4e-16 89.0 265 25.7
Actinidia37711 Actinidia chinensis HOM05D007245 ORTHO05D009049 8.3e-16 88.6 235 28.1
MSTRG.15573 Avicennia marina HOM05D007245 ORTHO05D009049 8.3e-16 88.6 264 24.6
MBI11_g03703_MAGBIO Magnolia biondii HOM05D007245 ORTHO05D009049 8.3e-16 88.6 265 26.0
QL02p068579 Quercus lobata HOM05D007245 ORTHO05D009049 8.3e-16 88.6 265 26.8
SHI23073 Sapria himalayana HOM05D000105 ORTHO05D000023 8.3e-16 88.6 280 25.7
Atru.chr6.2722 Acer truncatum HOM05D007245 ORTHO05D009049 1.1e-15 88.2 294 24.5
Cc09_g07550 Coffea canephora HOM05D007245 ORTHO05D009049 1.9e-15 87.4 267 26.2
Duzib187G0347 Durio zibethinus HOM05D007245 ORTHO05D009049 1.9e-15 87.4 266 26.7
MELO3C014761.2 Cucumis melo HOM05D007245 ORTHO05D009049 3.2e-15 86.7 180 27.2
DCAR_000961 Daucus carota HOM05D007245 ORTHO05D009049 3.2e-15 86.7 270 25.6
CsaV3_3G020030 Cucumis sativus L. HOM05D007245 ORTHO05D009049 4.1e-15 86.3 180 27.2
Sed0013025 Sechium edule HOM05D007245 ORTHO05D009049 5.4e-15 85.9 270 24.8
Lsat_1_v5_gn_2_60460 Lactuca sativa HOM05D007245 ORTHO05D009049 9.2e-15 85.1 270 25.2
Pp3c12_14270 Physcomitrium patens HOM05D007245 ORTHO05D009049 1.2e-14 84.7 217 29.0
ClCG05G012490 Citrullus lanatus HOM05D007245 ORTHO05D009049 1.6e-14 84.3 180 26.7
ECA238G1127 Erigeron canadensis HOM05D007245 ORTHO05D009049 2.1e-14 84.0 289 24.6
Lj7P619T29 Lonicera japonica HOM05D007245 ORTHO05D009049 2.7e-14 83.6 258 22.9
Peaxi162Scf00950g00032 Petunia axillaris HOM05D007245 ORTHO05D009049 2.7e-14 83.6 250 25.2
CANSAT64G0979 Cannabis sativa HOM05D007245 ORTHO05D009049 3.5e-14 83.2 259 26.6
Ciclev10016068m.g Citrus clementina HOM05D007245 ORTHO05D009049 3.5e-14 83.2 262 26.0
PGR142G1730 Punica granatum HOM05D007245 ORTHO05D009049 3.5e-14 83.2 268 26.9
Lalb_Chr24g0402921 Lupinus albus HOM05D007245 ORTHO05D009049 4.6e-14 82.8 268 24.6
Nitab4.5_0005411g0120 Nicotiana tabacum HOM05D007245 ORTHO05D009049 4.6e-14 82.8 256 25.8
Nitab4.5_0005095g0010 Nicotiana tabacum HOM05D007245 ORTHO05D009049 6.0e-14 82.4 240 26.7
CSS0018621 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 1.3e-13 81.3 274 23.4
TWI32G1326 Tripterygium wilfordii HOM05D007245 ORTHO05D009049 1.3e-13 81.3 269 25.3
vmacro18400 Vaccinium macrocarpon HOM05D007245 ORTHO05D009049 1.3e-13 81.3 270 24.8
MD17G1004200 Malus domestica HOM05D007245 ORTHO05D009049 1.7e-13 80.9 276 24.6
CSS0002235 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 3.0e-13 80.1 270 23.3
Migut.K01486 Erythranthe guttata HOM05D007245 ORTHO05D009049 3.9e-13 79.7 252 24.2
Oeu045577.1 Olea europaea HOM05D007245 ORTHO05D009049 3.9e-13 79.7 275 25.1
Prupe.7G011800 Prunus persica HOM05D007245 ORTHO05D009049 3.9e-13 79.7 274 24.1
RcHm_v2.0_Chr2g0176701 Rosa chinensis HOM05D007245 ORTHO05D009049 3.9e-13 79.7 270 26.3
MD09G1001100 Malus domestica HOM05D007245 ORTHO05D009049 5.1e-13 79.3 275 24.0
FvH4_6g31080 Fragaria vesca HOM05D007245 ORTHO05D009049 1.1e-12 78.2 272 24.3
SalBow7G3959 Salvia bowleyana HOM05D007245 ORTHO05D009049 1.1e-12 78.2 261 23.0
Sc03g0005330 Simmondsia chinensis HOM05D007245 ORTHO05D009049 1.1e-12 78.2 265 27.5
Aqoxy2G01225 Aquilegia oxysepala HOM05D007245 ORTHO05D009049 1.5e-12 77.8 274 23.0
Pp3c4_3800 Physcomitrium patens HOM05D007245 ORTHO05D009049 2.5e-12 77.0 179 26.8
CDE06G2711 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 3.3e-12 76.6 266 26.3
Glyma.19G106200 Glycine max HOM05D007245 ORTHO05D009049 5.6e-12 75.9 263 25.1
FAN05G2831 Fragaria x ananassa HOM05D007245 ORTHO05D009049 1.2e-11 74.7 272 23.5
Sabra02G0180800 Salix brachista HOM05D007245 ORTHO05D009049 1.6e-11 74.3 103 34.0
Rhsim08G0037800 Rhododendron simsii HOM05D007245 ORTHO05D009049 2.1e-11 73.9 264 24.2
Ca_11923_v3 Cicer arietinum L. HOM05D008048 ORTHO05D010199 3.6e-11 73.2 121 38.0
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 8.1e-11 72.0 96 34.4
SGA_v2.0_scaffold34G13684 Striga asiatica HOM05D007245 ORTHO05D009049 3.1e-10 70.1 271 23.6
CDE02G4767 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 4.0e-10 69.7 263 26.6
Lj1g0022763 Lotus japonicus HOM05D007245 ORTHO05D009049 4.0e-10 69.7 263 24.0
TPR.G31664 Trifolium pratense HOM05D007245 ORTHO05D009049 5.2e-10 69.3 267 23.2
Medtr7g084610 Medicago truncatula HOM05D007245 ORTHO05D009049 1.2e-09 68.2 249 25.3
Phvul.001G099200 Phaseolus vulgaris HOM05D007245 ORTHO05D009049 3.4e-09 66.6 264 24.6
RcHm_v2.0_Chr2g0137761 Rosa chinensis HOM05D007245 ORTHO05D009049 3.4e-09 66.6 271 22.9
HPP92_006441 Vanilla planifolia HOM05D007245 ORTHO05D009049 4.4e-09 66.2 168 29.8
AUR62042868 Chenopodium quinoa HOM05D007245 ORTHO05D009049 3.8e-08 63.2 80 35.0
Manes.04G095000 Manihot esculenta HOM05D007245 ORTHO05D009049 4.9e-08 62.8 265 22.3
Ca_08230_v3 Cicer arietinum L. HOM05D007245 ORTHO05D009049 2.4e-07 60.5 104 28.8
Psat3g091920 Pisum sativum HOM05D007245 ORTHO05D009049 4.1e-07 59.7 91 29.7
TPR.G2455 Trifolium pratense HOM05D001193 ORTHO05D001016 7.1e-07 58.9 178 30.3
VMungo1383G3535 Vigna mungo HOM05D007245 ORTHO05D009049 7.1e-07 58.9 264 23.1


User provided reference genes

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