Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29654 Davidia involucrata HOM05D002474 ORTHO05D007142 2.4e-44 181.8 93 100.0
Hma1.2p1_0157F.1_g069220 Hydrangea macrophylla HOM05D002474 ORTHO05D007142 4.3e-25 117.9 92 70.7
Hma1.2p1_0157F.1_g069230 Hydrangea macrophylla HOM05D002474 ORTHO05D007142 4.3e-25 117.9 92 70.7
Dinv30985 Davidia involucrata HOM05D002474 ORTHO05D007142 1.2e-24 116.3 92 70.7
ECA246G2471 Erigeron canadensis HOM05D002474 ORTHO05D007142 3.6e-24 114.8 92 68.5
Lj5A306G48 Lonicera japonica HOM05D002474 ORTHO05D007142 4.7e-24 114.4 92 68.5
HanXRQChr12g0367101 Helianthus annuus HOM05D002474 ORTHO05D007142 6.2e-24 114.0 92 68.5
Duzib268G0482 Durio zibethinus HOM05D002474 ORTHO05D007142 8.1e-24 113.6 92 66.3
Nn6g34097 Nelumbo nucifera HOM05D002474 ORTHO05D007142 8.1e-24 113.6 92 67.4
Rhsim11G0114900 Rhododendron simsii HOM05D002474 ORTHO05D007142 1.4e-23 112.8 95 67.4
Thecc.06G063000 Theobroma cacao HOM05D002474 ORTHO05D007142 1.4e-23 112.8 92 67.4
QL02p103729 Quercus lobata HOM05D002474 ORTHO05D007142 1.8e-23 112.5 92 67.4
Aqoxy6G02786 Aquilegia oxysepala HOM05D002474 ORTHO05D007142 2.3e-23 112.1 92 66.3
Os01g0225200 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D007142 3.1e-23 111.7 92 66.3
Peaxi162Scf00071g00020 Petunia axillaris HOM05D002474 ORTHO05D007142 3.1e-23 111.7 92 67.4
VMungo1215G1553 Vigna mungo HOM05D002474 ORTHO05D007142 3.1e-23 111.7 92 67.4
Zm00001eb119500 Zea mays HOM05D002474 ORTHO05D007142 3.1e-23 111.7 92 66.3
Actinidia11725 Actinidia chinensis HOM05D002474 ORTHO05D007142 4.0e-23 111.3 92 67.4
MBI03_g28951_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D007142 4.0e-23 111.3 92 65.2
Phvul.003G090600 Phaseolus vulgaris HOM05D002474 ORTHO05D007142 4.0e-23 111.3 92 66.3
Cc02_g23800 Coffea canephora HOM05D002474 ORTHO05D007142 5.2e-23 110.9 92 68.5
Sc10g0008100 Simmondsia chinensis HOM05D002474 ORTHO05D007142 5.2e-23 110.9 92 66.3
Cfa004419 Carpinus fangiana HOM05D002474 ORTHO05D007142 6.8e-23 110.5 92 66.3
Haze_09959 Corylus avellana HOM05D002474 ORTHO05D007142 6.8e-23 110.5 92 66.3
Gorai.007G360100 Gossypium raimondii HOM05D002474 ORTHO05D007142 6.8e-23 110.5 92 65.2
Lsat_1_v5_gn_9_123041 Lactuca sativa HOM05D002474 ORTHO05D007142 6.8e-23 110.5 92 67.4
Migut.B00704 Erythranthe guttata HOM05D002474 ORTHO05D007142 8.9e-23 110.2 92 67.4
Oeu000165.2 Olea europaea HOM05D002474 ORTHO05D007142 8.9e-23 110.2 92 65.2
Gohir.A11G312300 Gossypium hirsutum HOM05D002474 ORTHO05D007142 1.2e-22 109.8 92 65.2
Potri.004G230600 Populus trichocarpa HOM05D002474 ORTHO05D007142 1.2e-22 109.8 92 64.1
Nitab4.5_0001031g0150 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.5e-22 109.4 92 66.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.5e-22 109.4 92 66.3
vmacro01627 Vaccinium macrocarpon HOM05D002474 ORTHO05D007142 1.5e-22 109.4 92 67.4
GSVIVG01018503001 Vitis vinifera HOM05D002474 ORTHO05D007142 1.5e-22 109.4 92 64.1
MSTRG.16457 Avicennia marina HOM05D002474 ORTHO05D007142 2.6e-22 108.6 91 65.9
Sabra01G0175800 Salix brachista HOM05D002474 ORTHO05D007142 2.6e-22 108.6 92 64.1
CSS0041347 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D007142 3.4e-22 108.2 90 67.8
Ciclev10001219m.g Citrus clementina HOM05D002474 ORTHO05D007142 3.4e-22 108.2 92 63.0
Prupe.5G038000 Prunus persica HOM05D002474 ORTHO05D007142 3.4e-22 108.2 92 65.2
SGA_v2.0_scaffold254G45227 Striga asiatica HOM05D002474 ORTHO05D007142 3.4e-22 108.2 92 65.2
CiPaw.05G000700 Carya illinoinensis HOM05D002474 ORTHO05D007142 4.4e-22 107.8 92 65.2
Gohir.D11G328800 Gossypium hirsutum HOM05D002474 ORTHO05D007142 4.4e-22 107.8 92 64.1
MD04G1042800 Malus domestica HOM05D002474 ORTHO05D007142 5.8e-22 107.5 92 64.1
CAN.G492.43 Capsicum annuum HOM05D002474 ORTHO05D007142 7.6e-22 107.1 92 63.0
FAN11G0845 Fragaria x ananassa HOM05D002474 ORTHO05D007142 7.6e-22 107.1 92 65.2
FAN21G2400 Fragaria x ananassa HOM05D002474 ORTHO05D007142 7.6e-22 107.1 92 65.2
RcHm_v2.0_Chr5g0034601 Rosa chinensis HOM05D002474 ORTHO05D007142 7.6e-22 107.1 92 65.2
Atru.chr6.88 Acer truncatum HOM05D002474 ORTHO05D007142 1.3e-21 106.3 92 62.0
Solyc10g005910.2 Solanum lycopersicum HOM05D002474 ORTHO05D007142 1.7e-21 105.9 92 63.0
Sopen10g001870 Solanum pennellii HOM05D002474 ORTHO05D007142 1.7e-21 105.9 92 63.0
Lalb_Chr18g0047541 Lupinus albus HOM05D002474 ORTHO05D007142 2.2e-21 105.5 92 63.0
Manes.06G014900 Manihot esculenta HOM05D002474 ORTHO05D007142 2.2e-21 105.5 92 62.0
PGSC0003DMG400014407 Solanum tuberosum HOM05D002474 ORTHO05D007142 2.2e-21 105.5 92 62.0
AL7G50170 Arabidopsis lyrata HOM05D002474 ORTHO05D007142 2.9e-21 105.1 92 60.9
AT5G39960 Arabidopsis thaliana HOM05D002474 ORTHO05D007142 2.9e-21 105.1 92 60.9
EL10Ac7g18100 Beta vulgaris HOM05D002474 ORTHO05D007142 2.9e-21 105.1 92 62.0
CsaV3_3G006770 Cucumis sativus L. HOM05D002474 ORTHO05D007142 2.9e-21 105.1 92 62.0
CANSAT01G1519 Cannabis sativa HOM05D002474 ORTHO05D007142 3.7e-21 104.8 93 60.2
ClCG10G007610 Citrullus lanatus HOM05D002474 ORTHO05D007142 3.7e-21 104.8 92 62.0
MELO3C016437.2 Cucumis melo HOM05D002474 ORTHO05D007142 3.7e-21 104.8 92 62.0
Hund06555 Selenicereus undatus HOM05D002474 ORTHO05D007142 3.7e-21 104.8 92 62.0
HPP92_023931 Vanilla planifolia HOM05D002474 ORTHO05D007142 3.7e-21 104.8 92 62.0
HPP92_023952 Vanilla planifolia HOM05D002474 ORTHO05D007142 3.7e-21 104.8 92 62.0
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 6.4e-21 104.0 92 59.8
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 6.4e-21 104.0 92 59.8
BolC4t26229H Brassica oleracea HOM05D002474 ORTHO05D007142 6.4e-21 104.0 92 59.8
BraA04t16929Z Brassica rapa HOM05D002474 ORTHO05D007142 6.4e-21 104.0 92 59.8
Cpa.g.sc2.182 Carica papaya HOM05D002474 ORTHO05D007142 6.4e-21 104.0 92 60.9
FAN16G1529 Fragaria x ananassa HOM05D002474 ORTHO05D007142 6.4e-21 104.0 92 64.1
FAN25G2389 Fragaria x ananassa HOM05D002474 ORTHO05D007142 6.4e-21 104.0 92 64.1
Sp7g02120 Schrenkiella parvula HOM05D002474 ORTHO05D007142 6.4e-21 104.0 92 59.8
Aa31LG9G1650 Aethionema arabicum HOM05D002474 ORTHO05D007142 8.4e-21 103.6 92 59.8
CARHR262220 Cardamine hirsuta HOM05D002474 ORTHO05D007142 8.4e-21 103.6 92 59.8
Eucgr.L00744 Eucalyptus grandis HOM05D002474 ORTHO05D007142 8.4e-21 103.6 93 62.4
ATR0041G021 Amborella trichopoda HOM05D002474 ORTHO05D007142 1.1e-20 103.2 92 64.1
AUR62025683 Chenopodium quinoa HOM05D002474 ORTHO05D007142 1.1e-20 103.2 92 62.0
Thhalv10027686m.g Eutrema salsugineum HOM05D002474 ORTHO05D007142 1.1e-20 103.2 92 58.7
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.1e-20 103.2 91 62.6
PSO339G3087 Papaver somniferum HOM05D002474 ORTHO05D007142 1.1e-20 103.2 92 63.0
Sed0015094 Sechium edule HOM05D002474 ORTHO05D007142 1.1e-20 103.2 92 62.0
Carub.0007s3576 Capsella rubella HOM05D002474 ORTHO05D007142 1.4e-20 102.8 92 59.8
PGR142G0374 Punica granatum HOM05D002474 ORTHO05D007142 1.4e-20 102.8 93 62.4
TWI14G0213 Tripterygium wilfordii HOM05D002474 ORTHO05D007142 1.4e-20 102.8 92 60.9
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.9e-20 102.4 93 59.1
Glyma.07G271300 Glycine max HOM05D002474 ORTHO05D007142 2.4e-20 102.1 92 60.9
SHI11364 Sapria himalayana HOM05D002474 ORTHO05D007142 2.4e-20 102.1 92 59.8
Ah.08g218030 Amaranthus hybridus HOM05D000912 ORTHO05D001232 4.1e-20 101.3 92 59.8
SalBow4G0251 Salvia bowleyana HOM05D002474 ORTHO05D007142 4.1e-20 101.3 92 60.9
AUR62001301 Chenopodium quinoa HOM05D002474 ORTHO05D007142 9.2e-20 100.1 92 60.9
SEGI_36950 Sequoiadendron giganteum HOM05D002474 ORTHO05D007142 1.6e-19 99.4 92 59.8
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.1e-19 99.0 92 58.7
TPR.G5978 Trifolium pratense HOM05D002474 ORTHO05D007142 2.1e-19 99.0 92 60.9
Psat0s2555g0320 Pisum sativum HOM05D002474 ORTHO05D007142 2.7e-19 98.6 92 60.9
Medtr4g134500 Medicago truncatula HOM05D002474 ORTHO05D007142 6.0e-19 97.4 92 59.8
Ca_13520_v3 Cicer arietinum L. HOM05D002474 ORTHO05D007142 7.8e-19 97.1 92 59.8
arahy.Tifrunner.gnm1.ann1.W79BEX Arachis hypogaea HOM05D002474 ORTHO05D007142 1.3e-18 96.3 92 57.6
Lj4g0011201 Lotus japonicus HOM05D002474 ORTHO05D007142 3.9e-18 94.7 93 60.2
unitig_82.g27138 Utricularia gibba HOM05D002474 ORTHO05D007142 6.6e-18 94.0 92 57.6
arahy.Tifrunner.gnm1.ann1.1P8C08 Arachis hypogaea HOM05D002474 ORTHO05D007142 8.6e-18 93.6 92 56.5
Nitab4.5_0002158g0290 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.9e-17 92.4 92 59.8
Lj6g0027900 Lotus japonicus HOM05D002474 ORTHO05D007142 7.3e-17 90.5 93 58.1
Pp3c21_12090 Physcomitrium patens HOM05D002474 ORTHO05D007142 1.6e-16 89.4 92 52.2
MD13G1272200 Malus domestica HOM05D002474 ORTHO05D007142 2.1e-16 89.0 69 69.6
SGA_v2.0_scaffold7G03554 Striga asiatica HOM05D002474 ORTHO05D007142 6.2e-16 87.4 69 66.7
FvH4_3g20580 Fragaria vesca HOM05D002474 ORTHO05D007142 1.4e-15 86.3 69 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1260 Anthoceros agrestis HOM05D002474 ORTHO05D007142 2.4e-15 85.5 92 48.9
Mapoly0007s0284 Marchantia polymorpha HOM05D002474 ORTHO05D007142 8.9e-15 83.6 92 48.9
Mapoly0252s0004 Marchantia polymorpha HOM05D002474 ORTHO05D007142 8.9e-15 83.6 92 48.9
SMO172G0210 Selaginella moellendorffii HOM05D002474 ORTHO05D007142 6.4e-13 77.4 92 48.9
Cre03.g172250 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D007142 2.3e-10 68.9 94 42.6


User provided reference genes

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