Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 3.5e-183 644.8 319 100.0
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.6e-140 503.1 279 87.5
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.1e-140 502.7 279 87.5
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 2.1e-140 502.7 279 87.1
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 2.8e-140 502.3 282 86.9
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 3.6e-140 501.9 279 86.7
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 3.6e-140 501.9 276 88.4
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.9e-139 497.3 279 86.0
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 2.0e-138 496.1 279 86.0
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 2.6e-138 495.7 279 86.0
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 7.5e-138 494.2 279 86.0
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 7.5e-138 494.2 279 84.6
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 9.8e-138 493.8 279 86.4
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.9e-137 492.3 279 85.3
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 3.7e-137 491.9 279 85.3
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 3.7e-137 491.9 279 84.2
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 4.9e-137 491.5 279 85.7
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 4.9e-137 491.5 279 84.2
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 3.2e-136 488.8 279 84.6
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 4.1e-136 488.4 277 83.8
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 4.1e-136 488.4 279 84.9
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 4.1e-136 488.4 279 84.9
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 4.1e-136 488.4 279 84.6
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 5.4e-136 488.0 279 85.7
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.6e-135 486.5 276 85.1
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.6e-135 486.5 285 82.8
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 1.6e-135 486.5 279 84.6
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.1e-135 486.1 279 84.2
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 2.7e-135 485.7 279 85.3
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.5e-135 485.3 279 84.6
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 3.5e-135 485.3 280 84.6
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 3.5e-135 485.3 279 83.9
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 6.0e-135 484.6 279 84.2
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 7.8e-135 484.2 277 83.8
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.0e-134 483.8 293 80.5
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.0e-134 483.8 279 85.3
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.3e-134 483.4 279 84.6
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.3e-134 483.4 279 84.2
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.3e-134 483.4 279 84.2
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.7e-134 483.0 277 84.5
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 1.7e-134 483.0 279 84.2
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.7e-134 483.0 279 81.0
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 3.0e-134 482.3 279 83.9
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 5.1e-134 481.5 279 83.5
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.6e-134 481.1 279 83.5
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 8.6e-134 480.7 279 82.4
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 8.6e-134 480.7 279 83.5
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 8.6e-134 480.7 277 83.4
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 8.6e-134 480.7 281 84.0
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.1e-133 480.3 279 84.9
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.1e-133 480.3 279 84.9
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 1.5e-133 479.9 269 85.9
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.5e-133 479.9 279 84.9
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 1.9e-133 479.6 278 84.2
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.9e-133 479.6 279 83.2
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 2.5e-133 479.2 279 82.4
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.3e-133 478.8 279 83.2
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 7.3e-133 477.6 279 83.9
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.2e-132 476.9 279 82.1
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 3.6e-132 475.3 279 83.5
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 3.6e-132 475.3 279 81.7
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 3.6e-132 475.3 279 82.8
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 6.2e-132 474.6 279 82.4
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.1e-131 473.8 283 82.0
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.1e-131 473.8 280 83.6
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.1e-131 473.8 279 82.1
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.1e-131 473.8 279 82.1
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.4e-131 473.4 280 84.3
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.4e-131 473.4 279 81.4
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.8e-131 473.0 276 83.0
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 2.3e-131 472.6 279 81.0
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 5.2e-131 471.5 280 80.0
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 5.2e-131 471.5 279 82.4
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 8.9e-131 470.7 271 84.9
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.2e-130 470.3 277 80.1
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 2.0e-130 469.5 280 82.5
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 5.8e-130 468.0 279 82.1
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 5.8e-130 468.0 279 82.1
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 7.6e-130 467.6 280 82.9
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 7.6e-130 467.6 279 80.6
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 9.9e-130 467.2 279 80.6
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 1.7e-129 466.5 279 80.3
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.2e-129 466.1 279 81.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 2.2e-129 466.1 279 81.7
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 2.2e-129 466.1 279 80.6
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.1e-128 463.8 280 82.1
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.4e-128 463.4 299 77.3
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.9e-128 463.0 280 82.5
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.9e-128 463.0 279 78.5
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 5.4e-128 461.5 279 80.6
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.1e-128 461.1 277 80.9
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 7.1e-128 461.1 259 85.3
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.2e-127 460.3 318 72.0
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.2e-127 460.3 279 80.6
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.6e-127 459.9 272 82.0
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.6e-127 459.9 277 80.5
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 7.8e-127 457.6 279 78.9
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.0e-126 457.2 270 80.7
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 1.0e-126 457.2 279 78.9
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 2.3e-126 456.1 274 80.7
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 2.3e-126 456.1 279 78.9
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 3.0e-126 455.7 270 80.4
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 3.0e-126 455.7 270 80.4
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 3.0e-126 455.7 270 80.4
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 3.0e-126 455.7 270 80.4
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 3.0e-126 455.7 270 80.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 5.1e-126 454.9 279 78.5
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 5.1e-126 454.9 280 79.3
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 5.6e-125 451.4 324 71.3
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.1e-124 449.5 268 80.6
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 2.8e-124 449.1 272 80.1
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 4.7e-124 448.4 277 77.6
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 6.2e-124 448.0 279 78.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.1e-123 445.7 279 78.1
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 5.2e-123 444.9 279 78.5
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 5.2e-123 444.9 277 78.0
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.2e-122 443.7 272 78.7
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.0e-122 443.0 279 77.1
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 3.4e-122 442.2 279 80.6
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.4e-122 441.8 281 79.7
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 5.8e-122 441.4 279 76.3
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 7.6e-122 441.0 279 76.3
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 7.6e-122 441.0 279 76.0
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 2.2e-121 439.5 272 79.4
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 2.9e-121 439.1 279 76.0
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 2.1e-119 433.0 279 75.6
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 2.1e-119 433.0 279 76.7
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.5e-119 432.2 279 74.2
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 2.5e-117 426.0 269 76.6
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.6e-117 424.1 279 73.1
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.6e-116 423.3 279 75.3
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.8e-116 422.5 268 77.2
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.6e-116 422.2 279 75.3
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 3.1e-115 419.1 268 75.7
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 3.1e-115 419.1 273 73.6
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 4.0e-115 418.7 273 74.0
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 2.0e-114 416.4 274 74.1
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 3.4e-114 415.6 270 75.6
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 9.9e-114 414.1 273 74.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.9e-110 402.1 273 71.4
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 6.6e-110 401.4 274 70.4
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 7.3e-109 397.9 279 69.9
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 7.3e-109 397.9 234 81.2
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 9.6e-109 397.5 297 69.4
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 3.6e-108 395.6 279 69.2
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.2e-105 386.3 279 64.5
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 9.3e-104 380.9 279 64.2
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.9e-101 373.2 278 62.2
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 2.5e-101 372.9 279 63.4
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 4.8e-100 368.6 278 61.2
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 2.0e-98 363.2 280 62.5
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 4.9e-97 358.6 271 62.7
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.6e-95 352.1 195 86.2
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.3e-94 349.7 200 82.0
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 6.7e-94 348.2 250 68.4
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 6.9e-91 338.2 276 66.7
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 9.0e-91 337.8 275 58.9
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.2e-89 333.2 198 82.8
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.2e-89 333.2 192 82.3
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 7.2e-88 328.2 281 61.2
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.2e-87 327.4 219 72.6
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 2.8e-84 316.2 167 89.8
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 4.1e-83 312.4 278 55.4
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 2.0e-82 310.1 294 52.4
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 7.2e-80 301.6 185 77.8
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 9.7e-77 291.2 302 49.7
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 4.2e-72 275.8 179 73.2
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 7.2e-72 275.0 171 81.3
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 5.1e-70 268.9 279 48.4
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 3.7e-52 209.5 177 61.0
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 5.2e-46 189.1 101 88.1
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 4.5e-42 176.0 120 71.7
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.7e-41 174.1 148 63.5
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.1e-40 171.4 120 70.0
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 6.1e-39 165.6 88 88.6
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 3.4e-37 159.8 113 66.4
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 6.2e-31 139.0 273 33.0
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.0e-30 138.3 84 79.8
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 1.4e-30 137.9 249 33.7
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 5.0e-25 119.4 285 26.3
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 9.5e-24 115.2 134 51.5
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.1e-16 91.7 182 30.2
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 4.9e-12 76.3 41 87.8
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 6.6e-09 65.9 48 68.8
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.1e-08 65.1 68 52.9


User provided reference genes

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