Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.1e-127 459.9 222 100.0
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 6.3e-107 391.0 199 93.5
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.5e-105 386.3 206 89.8
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.2e-104 382.5 199 91.5
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.8e-104 381.7 199 91.5
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.8e-104 381.7 199 91.0
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 5.0e-104 381.3 199 91.0
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.4e-103 379.8 199 89.4
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.4e-103 379.8 199 89.4
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.2e-103 378.3 206 87.9
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 4.2e-103 378.3 199 87.9
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 5.5e-103 377.9 206 87.4
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 7.2e-103 377.5 206 85.9
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 9.3e-103 377.1 199 88.9
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 9.3e-103 377.1 199 88.4
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.2e-102 376.7 199 89.9
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.1e-102 375.9 206 85.9
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.1e-102 375.9 206 85.9
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 2.7e-102 375.6 206 87.4
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.0e-101 373.6 199 89.4
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.8e-101 372.9 199 88.9
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.3e-101 372.5 199 88.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 3.0e-101 372.1 206 85.4
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 8.7e-101 370.5 227 81.5
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.1e-100 370.2 206 85.9
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.1e-100 370.2 199 88.4
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 2.5e-100 369.0 199 86.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 3.3e-100 368.6 202 86.1
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 3.3e-100 368.6 206 84.0
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 3.3e-100 368.6 199 86.4
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 4.3e-100 368.2 199 86.9
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 7.4e-100 367.5 208 85.6
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 7.4e-100 367.5 199 86.4
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 7.4e-100 367.5 199 86.4
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.6e-99 366.3 206 85.9
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.2e-99 365.9 199 85.4
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 4.8e-99 364.8 199 86.9
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 8.2e-99 364.0 202 85.1
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 8.2e-99 364.0 202 85.1
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.4e-98 363.2 199 86.4
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.4e-98 362.5 205 82.4
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 2.4e-98 362.5 198 84.3
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.4e-98 362.5 202 84.7
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.1e-98 362.1 202 84.7
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 3.1e-98 362.1 191 87.4
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 5.3e-98 361.3 202 84.2
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 6.9e-98 360.9 206 84.5
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.2e-97 360.1 197 84.3
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.5e-97 359.8 189 88.4
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.5e-97 359.8 206 82.0
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 3.4e-97 358.6 206 81.6
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 4.5e-97 358.2 206 81.1
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 7.7e-97 357.5 202 83.2
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.0e-96 357.1 205 80.5
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 1.7e-96 356.3 205 80.5
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.2e-96 355.9 206 81.6
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.8e-96 355.1 205 81.0
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 5.0e-96 354.8 205 80.5
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 8.5e-96 354.0 205 80.5
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.1e-95 353.6 198 82.3
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.4e-95 353.2 206 81.6
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.4e-95 353.2 223 77.1
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.9e-95 352.8 198 82.3
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.5e-95 352.4 205 80.0
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 3.2e-95 352.1 205 80.5
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 3.2e-95 352.1 205 80.5
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 5.5e-95 351.3 202 82.2
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 5.5e-95 351.3 219 78.1
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.8e-93 346.3 203 80.3
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.8e-93 346.3 205 79.0
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.0e-93 345.5 216 73.6
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 8.8e-93 344.0 199 81.4
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 7.4e-92 340.9 177 89.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 9.7e-92 340.5 247 68.8
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.3e-91 340.1 201 78.1
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.8e-91 339.0 199 80.9
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 3.7e-91 338.6 196 79.1
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.7e-91 338.6 199 81.9
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 4.8e-91 338.2 230 71.7
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 4.8e-91 338.2 198 78.8
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 6.3e-91 337.8 201 83.1
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.4e-90 336.7 219 75.8
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 2.4e-90 335.9 203 76.8
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 9.1e-90 334.0 206 74.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 9.1e-90 334.0 193 80.3
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.5e-89 333.2 206 73.8
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 7.7e-89 330.9 193 78.8
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 3.8e-88 328.6 218 75.7
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 5.0e-88 328.2 199 77.4
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.4e-87 326.6 199 74.4
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 7.2e-87 324.3 202 78.2
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.2e-86 323.6 198 76.3
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 3.6e-86 322.0 197 74.1
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.3e-85 319.3 197 77.2
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 1.5e-84 316.6 191 77.5
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 5.3e-82 308.1 160 89.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-79 300.4 167 85.6
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 3.6e-78 295.4 194 70.6
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 4.2e-71 271.9 188 64.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 6.3e-67 258.1 185 64.3
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 4.2e-63 245.4 189 62.4
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.6e-62 243.4 191 62.3
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.7e-59 232.3 132 81.1
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.4e-42 177.2 150 57.3
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.1e-34 151.0 94 73.4
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 9.2e-34 147.9 118 66.1
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.0e-29 132.5 72 88.9
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 7.1e-26 121.7 73 78.1
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 1.4e-21 107.5 206 31.1
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.1e-18 97.8 222 29.7
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.1e-13 81.3 41 90.2
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.8e-13 80.5 234 26.1
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 3.8e-11 72.8 41 82.9
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.3e-08 63.5 38 71.1
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 5.6e-07 58.9 33 84.8


User provided reference genes

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