Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28616 Davidia involucrata HOM05D002005 ORTHO05D006330 0.0e+00 1474.9 905 100.0
Actinidia38829 Actinidia chinensis HOM05D002005 ORTHO05D006330 1.9e-69 268.5 1069 30.4
Rhsim13G0072200 Rhododendron simsii HOM05D002005 ORTHO05D006330 2.1e-68 265.0 746 32.7
QL01p026846 Quercus lobata HOM05D002005 ORTHO05D003757 5.6e-45 187.2 658 32.8
Potri.009G043000 Populus trichocarpa HOM05D002005 ORTHO05D006330 2.2e-41 175.3 909 26.7
Lj1A141G50 Lonicera japonica HOM05D002005 ORTHO05D006330 1.1e-37 162.9 703 29.2
Atru.chr3.4274 Acer truncatum HOM05D002005 ORTHO05D006330 3.1e-35 154.8 671 30.7
Hma1.2p1_1010F.1_g247400 Hydrangea macrophylla HOM05D002005 ORTHO05D006330 3.1e-35 154.8 146 60.3
Potri.001G249000 Populus trichocarpa HOM05D002005 ORTHO05D006330 6.4e-33 147.1 960 26.0
Prupe.6G060900 Prunus persica HOM05D002005 ORTHO05D006330 1.6e-31 142.5 547 31.1
Haze_24256 Corylus avellana HOM05D002005 ORTHO05D006330 7.8e-31 140.2 645 29.8
Cfa011652 Carpinus fangiana HOM05D002005 ORTHO05D006330 3.0e-30 138.3 616 30.0
Thecc.09G305600 Theobroma cacao HOM05D002005 ORTHO05D006330 4.3e-29 134.4 679 27.7
TWI79G1268 Tripterygium wilfordii HOM05D002005 ORTHO05D006330 3.8e-25 121.3 545 28.3
Sabra16G0151100 Salix brachista HOM05D002005 ORTHO05D006330 8.4e-25 120.2 951 24.9
Ciclev10029861m.g Citrus clementina HOM05D002005 ORTHO05D006330 1.2e-23 116.3 233 37.8
CSS0044657 Camellia sinensis var. sinensis HOM05D002005 ORTHO05D006330 5.1e-22 110.9 289 34.3
Nitab4.5_0005500g0020 Nicotiana tabacum HOM05D002005 ORTHO05D006330 2.5e-21 108.6 569 27.2
Manes.01G164500 Manihot esculenta HOM05D002005 ORTHO05D006330 4.3e-21 107.8 548 27.2
Peaxi162Scf00216g00115 Petunia axillaris HOM05D002005 ORTHO05D006330 3.6e-20 104.8 679 24.6
Solyc06g005960.4 Solanum lycopersicum HOM05D002005 ORTHO05D006330 3.6e-20 104.8 124 48.4
Actinidia25146 Actinidia chinensis HOM05D002005 ORTHO05D030865 8.1e-20 103.6 553 30.0
Sopen06g001930 Solanum pennellii HOM05D002005 ORTHO05D006330 1.1e-19 103.2 648 27.3
MD03G1075800 Malus domestica HOM05D002005 ORTHO05D006330 1.2e-18 99.8 124 50.8
Nitab4.5_0000102g0160 Nicotiana tabacum HOM05D002005 ORTHO05D006330 1.2e-18 99.8 547 26.9
Oeu049274.1 Olea europaea HOM05D002005 ORTHO05D006330 1.5e-18 99.4 127 51.2
PGSC0003DMG400004163 Solanum tuberosum HOM05D002005 ORTHO05D006330 2.6e-18 98.6 657 27.2
MD11G1080500 Malus domestica HOM05D002005 ORTHO05D006330 2.2e-17 95.5 548 27.2
Duzib168G1408 Durio zibethinus HOM05D002005 ORTHO05D006330 1.9e-16 92.4 736 26.2
Cpa.g.sc112.55 Carica papaya HOM05D002005 ORTHO05D006330 3.2e-16 91.7 662 26.3
Manes.02G121900 Manihot esculenta HOM05D002005 ORTHO05D006330 5.5e-16 90.9 636 26.6
TAR369G1119 Trochodendron aralioides HOM05D002005 ORTHO05D003757 7.1e-16 90.5 333 30.6
RcHm_v2.0_Chr5g0068611 Rosa chinensis HOM05D002005 ORTHO05D006330 9.3e-16 90.1 120 45.0
CiPaw.13G080900 Carya illinoinensis HOM05D002005 ORTHO05D006330 1.3e-14 86.3 727 25.0
FAN21G2515 Fragaria x ananassa HOM05D002005 ORTHO05D006330 1.1e-13 83.2 392 28.1
Actinidia16071 Actinidia chinensis HOM05D002005 ORTHO05D006330 2.5e-13 82.0 283 36.0
TWI31G1266 Tripterygium wilfordii HOM05D002005 ORTHO05D006330 4.3e-13 81.3 126 44.4
unitig_22.g5220 Utricularia gibba HOM05D002005 ORTHO05D006330 5.6e-13 80.9 96 54.2
CAN.G483.2 Capsicum annuum HOM05D002005 ORTHO05D006330 1.3e-12 79.7 537 23.8
Gorai.003G124500 Gossypium raimondii HOM05D002005 ORTHO05D006330 1.3e-12 79.7 88 52.3
Gohir.A03G049200 Gossypium hirsutum HOM05D002005 ORTHO05D006330 1.6e-12 79.3 88 51.1
FvH4_3g38180 Fragaria vesca HOM05D002005 ORTHO05D006330 2.1e-12 79.0 382 29.1
FAN11G0187 Fragaria x ananassa HOM05D002005 ORTHO05D006330 6.2e-12 77.4 379 28.8
TWI75G0348 Tripterygium wilfordii HOM05D002005 ORTHO05D006330 8.1e-12 77.0 576 25.0
CSS0001466 Camellia sinensis var. sinensis HOM05D002005 ORTHO05D030865 1.4e-11 76.3 174 39.7
FAN16G2282 Fragaria x ananassa HOM05D002005 ORTHO05D006330 1.4e-11 76.3 358 28.2
FAN25G0685 Fragaria x ananassa HOM05D002005 ORTHO05D006330 2.4e-11 75.5 389 28.0
Cc01_g13930 Coffea canephora HOM05D002005 ORTHO05D006330 2.0e-10 72.4 169 36.1
Gohir.D03G118000 Gossypium hirsutum HOM05D002005 ORTHO05D006330 1.7e-09 69.3 275 29.8
CsaV3_1G036030 Cucumis sativus L. HOM05D002005 ORTHO05D006330 2.2e-09 68.9 242 29.8
Phvul.006G065500 Phaseolus vulgaris HOM05D002005 ORTHO05D006330 6.5e-09 67.4 86 47.7
Migut.N00881 Erythranthe guttata HOM05D002005 ORTHO05D006330 1.1e-08 66.6 129 38.8
TAR623G1062 Trochodendron aralioides HOM05D002005 ORTHO05D003757 1.4e-08 66.2 495 26.7
Hund18858 Selenicereus undatus HOM05D002005 ORTHO05D003757 1.9e-08 65.9 167 32.3
MELO3C020564.2 Cucumis melo HOM05D002005 ORTHO05D006330 3.2e-08 65.1 248 29.4
Nn2g11384 Nelumbo nucifera HOM05D002005 ORTHO05D003757 9.3e-08 63.5 297 29.3
Lalb_Chr18g0050791 Lupinus albus HOM05D002005 ORTHO05D006330 3.5e-07 61.6 346 27.5
Sed0008864 Sechium edule HOM05D002005 ORTHO05D006330 3.5e-07 61.6 146 36.3
Lalb_Chr10g0103261 Lupinus albus HOM05D002005 ORTHO05D006330 1.0e-06 60.1 151 39.7
Phvul.008G262800 Phaseolus vulgaris HOM05D002005 ORTHO05D006330 2.3e-06 58.9 268 29.5
AUR62001686 Chenopodium quinoa HOM05D002005 ORTHO05D006330 3.0e-06 58.5 76 46.1
ClCG03G000910 Citrullus lanatus HOM05D002005 ORTHO05D006330 3.9e-06 58.2 218 33.0
VMungo0647G2111 Vigna mungo HOM05D002005 ORTHO05D006330 3.9e-06 58.2 240 29.6
Glyma.02G225200 Glycine max HOM05D002005 ORTHO05D006330 5.1e-06 57.8 347 27.7
COL.COLO4_19108 Corchorus olitorius HOM05D002005 ORTHO05D006330 6.7e-06 57.4 690 22.0


User provided reference genes

Program Settings