Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28531 Davidia involucrata HOM05D004403 ORTHO05D006164 6.8e-57 223.8 115 100.0
Dinv00168 Davidia involucrata HOM05D004403 ORTHO05D006164 9.6e-35 150.2 89 84.3
Dinv02142 Davidia involucrata HOM05D004403 ORTHO05D006164 1.3e-34 149.8 90 82.2
Dinv02140 Davidia involucrata HOM05D004403 ORTHO05D006164 1.6e-34 149.4 90 82.2
Dinv02141 Davidia involucrata HOM05D004403 ORTHO05D006164 2.1e-34 149.1 88 84.1
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 3.4e-32 141.7 88 79.5
Hma1.2p1_0099F.1_g048890 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 3.4e-32 141.7 88 79.5
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 1.1e-30 136.7 88 75.0
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 1.2e-29 133.3 88 77.3
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 7.9e-29 130.6 90 72.2
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 1.3e-28 129.8 90 75.6
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 5.1e-28 127.9 83 73.5
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 5.1e-28 127.9 88 69.3
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 4.3e-27 124.8 88 72.7
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 1.3e-26 123.2 87 67.8
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 1.3e-26 123.2 88 69.3
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 1.3e-26 123.2 88 72.7
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 1.6e-26 122.9 88 70.5
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 2.1e-26 122.5 88 72.7
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 2.1e-26 122.5 88 65.9
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 2.8e-26 122.1 88 75.0
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 2.8e-26 122.1 88 68.2
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 3.7e-26 121.7 88 69.3
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 4.8e-26 121.3 87 69.0
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 6.3e-26 120.9 87 69.0
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 6.3e-26 120.9 88 67.0
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 6.3e-26 120.9 88 67.0
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 6.3e-26 120.9 86 74.4
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 8.2e-26 120.6 88 68.2
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.1e-25 120.2 87 69.0
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.1e-25 120.2 88 65.9
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 1.4e-25 119.8 87 66.7
ClCG09G013360 Citrullus lanatus HOM05D004403 ORTHO05D006164 1.8e-25 119.4 88 68.2
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 1.8e-25 119.4 88 69.3
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 2.4e-25 119.0 89 67.4
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 3.1e-25 118.6 88 69.3
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 3.1e-25 118.6 88 65.9
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 4.1e-25 118.2 88 68.2
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.1e-25 118.2 88 64.8
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.1e-25 118.2 88 64.8
Cpa.g.sc3.267 Carica papaya HOM05D004403 ORTHO05D006164 5.3e-25 117.9 83 74.7
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 9.0e-25 117.1 88 69.3
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 9.0e-25 117.1 88 69.3
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 1.2e-24 116.7 90 65.6
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 1.2e-24 116.7 90 65.6
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 1.2e-24 116.7 88 67.0
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 1.2e-24 116.7 89 66.3
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 2.6e-24 115.5 90 65.6
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 2.6e-24 115.5 90 65.6
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 3.4e-24 115.2 88 65.9
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 7.6e-24 114.0 90 64.4
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 7.6e-24 114.0 88 63.6
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 1.0e-23 113.6 88 64.8
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 1.0e-23 113.6 96 60.4
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.7e-23 112.8 88 64.8
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 2.2e-23 112.5 87 64.4
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 5.0e-23 111.3 88 65.9
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 8.4e-23 110.5 90 67.8
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 8.4e-23 110.5 90 67.8
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 8.4e-23 110.5 88 64.8
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 8.4e-23 110.5 88 64.8
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 8.4e-23 110.5 88 64.8
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 8.4e-23 110.5 88 64.8
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 8.4e-23 110.5 87 65.5
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 1.1e-22 110.2 87 64.4
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 1.4e-22 109.8 90 64.4
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 2.5e-22 109.0 87 63.2
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 2.5e-22 109.0 87 60.9
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 3.2e-22 108.6 88 65.9
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 3.2e-22 108.6 77 67.5
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 3.2e-22 108.6 82 65.9
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 4.2e-22 108.2 82 64.6
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 4.2e-22 108.2 93 62.4
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 9.3e-22 107.1 76 68.4
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 2.1e-21 105.9 87 62.1
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 2.1e-21 105.9 83 63.9
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 6.1e-21 104.4 87 60.9
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 6.1e-21 104.4 91 59.3
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 1.0e-20 103.6 78 64.1
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.0e-20 103.6 76 67.1
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 1.8e-20 102.8 73 71.2
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 1.8e-20 102.8 90 63.3
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 2.3e-20 102.4 87 60.9
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 3.9e-20 101.7 73 68.5
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 5.1e-20 101.3 77 61.0
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 5.1e-20 101.3 71 69.0
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 1.5e-19 99.8 83 60.2
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 1.9e-19 99.4 90 62.2
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 2.5e-19 99.0 68 72.1
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 3.3e-19 98.6 73 65.8
SHI13862 Sapria himalayana HOM05D004403 ORTHO05D006164 3.3e-19 98.6 83 57.8
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 4.3e-19 98.2 83 59.0
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 5.7e-19 97.8 76 63.2
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 9.7e-19 97.1 89 57.3
HPP92_003516 Vanilla planifolia HOM05D004403 ORTHO05D006164 2.8e-18 95.5 82 54.9
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 1.4e-17 93.2 72 63.9
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 1.8e-17 92.8 89 56.2
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 2.4e-17 92.4 79 58.2
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 1.2e-16 90.1 87 56.3
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 1.1e-14 83.6 65 63.1
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 6.7e-12 74.3 48 79.2
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 8.8e-12 73.9 86 44.2
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 1.5e-11 73.2 69 47.8
TPR.G35938 Trifolium pratense HOM05D004403 ORTHO05D006164 2.0e-11 72.8 49 71.4
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 2.8e-10 68.9 95 44.2
CDE04G0245 Ceratophyllum demersum HOM05D002993 ORTHO05D003432 3.7e-10 68.6 55 61.8
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 1.0e-07 60.5 88 39.8
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 9.4e-06 53.9 70 45.7


User provided reference genes

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