Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 1.2e-80 303.1 159 100.0
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 9.8e-38 160.6 95 85.3
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.1e-36 157.1 96 85.4
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 9.2e-36 154.1 95 84.2
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 1.6e-35 153.3 95 84.2
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 8.6e-34 147.5 101 77.2
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 8.6e-34 147.5 110 74.5
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 8.6e-34 147.5 110 74.5
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 9.5e-33 144.1 85 85.9
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 2.3e-31 139.4 99 74.7
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 2.3e-31 139.4 88 79.5
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 5.2e-31 138.3 88 81.8
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 5.2e-31 138.3 88 81.8
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 6.8e-31 137.9 87 80.5
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 2.0e-30 136.3 96 72.9
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 7.6e-30 134.4 86 77.9
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 7.6e-30 134.4 86 80.2
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 9.9e-30 134.0 98 72.4
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 1.7e-29 133.3 95 72.6
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 1.7e-29 133.3 95 75.8
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 2.9e-29 132.5 93 72.0
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 2.9e-29 132.5 84 76.2
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 6.4e-29 131.3 91 73.6
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 6.4e-29 131.3 89 76.4
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 6.4e-29 131.3 89 76.4
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 1.1e-28 130.6 94 73.4
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.1e-28 130.6 94 73.4
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.1e-28 130.6 94 73.4
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 1.4e-28 130.2 84 77.4
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-28 129.8 86 77.9
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-28 129.8 86 77.9
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 3.2e-28 129.0 96 68.8
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 3.2e-28 129.0 88 73.9
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.1e-28 128.6 94 73.4
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 4.1e-28 128.6 91 73.6
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 5.4e-28 128.3 89 70.8
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 5.4e-28 128.3 91 73.6
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.2e-27 127.1 94 72.3
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 1.2e-27 127.1 97 69.1
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 1.6e-27 126.7 92 71.7
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 1.6e-27 126.7 92 71.7
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 1.6e-27 126.7 110 62.7
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 1.6e-27 126.7 110 62.7
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.6e-27 126.7 110 62.7
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 1.6e-27 126.7 93 68.8
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 2.7e-27 125.9 140 54.3
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 2.7e-27 125.9 95 71.6
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 3.5e-27 125.6 88 72.7
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 3.5e-27 125.6 95 68.4
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 6.0e-27 124.8 95 69.5
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 6.0e-27 124.8 88 75.0
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 6.0e-27 124.8 88 75.0
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 7.8e-27 124.4 88 73.9
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 1.0e-26 124.0 86 74.4
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 1.3e-26 123.6 77 79.2
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 1.3e-26 123.6 94 68.1
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.7e-26 123.2 96 67.7
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.7e-26 123.2 96 68.8
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 2.3e-26 122.9 94 68.1
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 2.3e-26 122.9 86 74.4
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 2.3e-26 122.9 86 74.4
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 2.3e-26 122.9 76 80.3
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 3.9e-26 122.1 87 70.1
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 3.9e-26 122.1 96 68.8
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 3.9e-26 122.1 94 66.0
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 5.1e-26 121.7 92 67.4
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 5.1e-26 121.7 92 67.4
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 5.1e-26 121.7 92 67.4
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 5.1e-26 121.7 74 82.4
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 5.1e-26 121.7 95 69.5
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 6.6e-26 121.3 80 73.8
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 6.6e-26 121.3 99 65.7
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 6.6e-26 121.3 88 67.0
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 6.6e-26 121.3 74 78.4
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 6.6e-26 121.3 77 79.2
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 8.6e-26 120.9 86 73.3
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 1.1e-25 120.6 92 66.3
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 1.1e-25 120.6 100 66.0
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 1.5e-25 120.2 92 66.3
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 1.5e-25 120.2 100 66.0
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 1.9e-25 119.8 92 67.4
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.9e-25 119.8 86 73.3
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 1.9e-25 119.8 75 80.0
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 2.5e-25 119.4 93 67.7
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 2.5e-25 119.4 99 65.7
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 3.3e-25 119.0 82 72.0
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 3.3e-25 119.0 95 69.5
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 4.3e-25 118.6 86 69.8
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 5.6e-25 118.2 100 65.0
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 9.6e-25 117.5 79 74.7
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 1.2e-24 117.1 131 51.1
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 1.6e-24 116.7 94 62.8
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.1e-24 116.3 71 84.5
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 3.6e-24 115.5 88 65.9
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 6.2e-24 114.8 78 74.4
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 2.6e-22 109.4 112 56.2
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 9.9e-22 107.5 78 70.5
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.3e-21 107.1 111 57.7
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 2.9e-21 105.9 78 69.2
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 1.4e-20 103.6 76 67.1
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 4.2e-20 102.1 64 76.6
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 1.2e-19 100.5 144 43.1
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 7.8e-19 97.8 83 67.5
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 3.9e-18 95.5 64 75.0
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 8.7e-18 94.4 69 68.1
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 6.2e-16 88.2 107 51.4
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 8.1e-16 87.8 68 67.6
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 9.3e-12 74.3 68 60.3
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 6.0e-11 71.6 74 52.7
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.0e-10 70.9 74 51.4
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.0e-10 70.9 74 51.4
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 1.3e-10 70.5 44 72.7
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 6.6e-10 68.2 42 69.0
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 5.6e-09 65.1 73 47.9
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 8.1e-08 61.2 73 41.1
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 1.5e-06 57.0 77 41.6


User provided reference genes

Program Settings