Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 1.6e-74 282.7 144 100.0
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 3.4e-69 265.0 144 94.4
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 1.3e-65 253.1 142 90.8
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.9e-64 249.2 144 88.9
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 2.5e-64 248.8 144 88.2
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.5e-64 248.8 144 87.5
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 7.2e-64 247.3 144 87.5
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 1.6e-63 246.1 145 88.3
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 2.1e-63 245.7 143 88.1
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.6e-63 245.0 145 87.6
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 6.1e-63 244.2 143 86.7
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 6.1e-63 244.2 143 86.7
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.0e-62 243.4 145 84.8
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.4e-62 243.0 145 86.9
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.8
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 6.8e-62 240.7 144 88.2
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 8.9e-62 240.4 135 91.1
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.6e-61 238.8 144 86.1
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 2.6e-61 238.8 146 86.3
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 9.8e-61 236.9 146 85.6
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 8.3e-60 233.8 142 86.6
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.4e-59 231.1 150 81.3
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.2e-58 229.9 146 84.2
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.7e-58 228.8 146 83.6
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 4.5e-58 228.0 145 84.1
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.0e-57 226.9 132 89.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.3e-57 226.5 146 82.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.7e-57 226.1 144 82.6
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.7e-57 226.1 146 83.6
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.7e-57 226.1 145 84.8
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 2.3e-57 225.7 146 83.6
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 2.9e-57 225.3 144 82.6
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 82.1
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 6.6e-57 224.2 145 81.4
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 6.6e-57 224.2 180 68.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.1e-56 223.4 145 82.1
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.5e-56 223.0 146 81.5
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 80.8
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 80.8
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 5.6e-56 221.1 145 80.7
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 5.6e-56 221.1 145 81.4
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 7.3e-56 220.7 134 85.1
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 7.3e-56 220.7 145 80.7
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.6e-55 219.5 144 81.2
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 1.6e-55 219.5 144 81.2
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.6e-55 219.5 142 81.0
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.6e-55 219.5 142 81.7
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 2.1e-55 219.2 145 80.0
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.1e-55 219.2 146 80.1
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 3.6e-55 218.4 141 80.1
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 80.8
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 6.1e-55 217.6 135 85.2
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 6.1e-55 217.6 146 79.5
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 6.1e-55 217.6 148 79.1
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 8.0e-55 217.2 143 80.4
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.0e-54 216.9 147 81.0
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.4e-54 216.5 144 79.9
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.4e-54 216.5 145 80.7
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.4e-54 216.5 144 81.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.8e-54 216.1 144 79.9
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.8e-54 216.1 159 76.1
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.3e-54 215.7 145 80.0
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 2.3e-54 215.7 146 78.1
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 80.0
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 80.0
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 3.0e-54 215.3 148 81.8
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 78.6
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.0e-54 215.3 143 80.4
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 80.7
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 4.0e-54 214.9 145 79.3
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 4.0e-54 214.9 146 78.8
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 5.2e-54 214.5 147 79.6
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 6.8e-54 214.2 147 79.6
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 8.9e-54 213.8 147 79.6
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 8.9e-54 213.8 147 79.6
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 8.9e-54 213.8 134 84.3
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.2e-53 213.4 147 79.6
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.2e-53 213.4 147 79.6
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.2e-53 213.4 147 79.6
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 79.3
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 79.3
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.5e-53 213.0 147 78.2
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.0e-53 212.6 147 79.6
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 2.0e-53 212.6 146 78.8
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.0e-53 212.6 146 78.8
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.0e-53 212.6 146 78.8
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.0e-53 212.6 147 79.6
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.6e-53 212.2 147 78.9
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 78.2
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.4e-53 211.5 147 80.3
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 7.5e-53 210.7 147 78.2
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 7.5e-53 210.7 147 77.6
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 7.5e-53 210.7 146 76.7
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 7.5e-53 210.7 148 77.7
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 9.8e-53 210.3 147 77.6
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 1.3e-52 209.9 147 78.2
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 2.2e-52 209.1 143 80.4
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.7e-52 208.4 147 78.2
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 8.3e-52 207.2 146 77.4
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.9
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.9
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 76.9
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.1e-51 206.8 139 81.3
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.1e-51 206.8 145 76.6
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.4e-51 206.5 146 77.4
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.4e-51 206.5 146 77.4
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.8e-51 206.1 132 81.8
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.4e-51 205.7 147 76.9
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 4.1e-51 204.9 145 77.2
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 7.0e-51 204.1 147 76.2
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 7.0e-51 204.1 120 88.3
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.0e-51 204.1 169 69.2
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 9.2e-51 203.8 132 81.8
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 9.2e-51 203.8 146 76.0
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 9.2e-51 203.8 145 76.6
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.2e-50 203.4 143 75.5
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.6e-50 203.0 144 77.1
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 4.6e-50 201.4 141 75.2
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 7.8e-50 200.7 145 76.6
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 1.0e-49 200.3 145 76.6
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.0e-49 200.3 138 78.3
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.7e-49 199.5 145 75.9
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 1.7e-49 199.5 150 75.3
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.0e-49 198.7 143 76.9
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 3.0e-49 198.7 145 77.9
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 7.3e-48 194.1 145 75.2
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 73.8
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 73.8
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 73.8
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.8e-47 192.2 144 74.3
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 6.2e-47 191.0 171 64.3
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.2e-47 191.0 146 74.0
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.0e-47 190.7 147 74.1
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 8.0e-47 190.7 147 74.1
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 8.0e-47 190.7 144 72.9
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.4e-46 189.9 129 76.7
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.4e-46 189.9 143 74.1
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.3e-46 189.1 144 72.2
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.2e-45 186.8 136 75.0
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 1.5e-45 186.4 146 71.9
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.5e-45 186.4 133 77.4
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 7.5e-45 184.1 123 80.5
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.9e-44 182.2 116 84.5
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 5.4e-43 177.9 145 68.3
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 7.0e-43 177.6 144 70.1
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 9.2e-43 177.2 144 68.8
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.2e-42 176.8 133 72.2
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 1.2e-42 176.8 133 74.4
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.1e-42 176.0 95 88.4
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 2.7e-42 175.6 109 83.5
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 2.7e-42 175.6 136 71.3
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 4.3e-40 168.3 122 77.0
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 8.1e-39 164.1 148 65.5
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.3e-38 162.5 104 85.6
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.0e-38 161.8 90 87.8
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 4.0e-38 161.8 121 75.2
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 3.4e-37 158.7 121 74.4
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 4.4e-37 158.3 141 66.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.9e-36 155.6 142 62.7
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 7.1e-35 151.0 98 83.7
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-34 147.9 134 64.9
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.3e-33 146.0 118 68.6
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.3e-33 146.0 118 68.6
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.2e-31 140.2 82 80.5
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 3.1e-30 135.6 112 68.8
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 6.8e-30 134.4 134 59.0
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.4e-27 126.7 134 56.7
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 5.4e-27 124.8 99 73.7
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 9.2e-27 124.0 104 72.1
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 69 82.6
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.1e-25 118.2 64 87.5
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.1e-24 117.1 143 51.0
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-22 109.4 132 50.8
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 4.0e-22 108.6 134 50.7
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 9.9e-21 104.0 84 71.4
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 4.9e-20 101.7 83 63.9
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 8.4e-20 100.9 78 73.1
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-19 100.5 77 74.0
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 6.0e-18 94.7 83 67.5
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 1.0e-17 94.0 45 93.3
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 3.3e-16 89.0 77 68.8
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 2.1e-10 69.7 80 55.0
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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