Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 2.3e-181 639.8 467 100.0
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 9.4e-135 485.0 450 82.9
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 5.2e-133 479.2 466 80.0
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 9.1e-130 468.4 444 82.7
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 7.7e-129 465.3 405 89.9
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.5e-127 460.3 466 77.9
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.5e-127 460.3 466 77.9
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 9.8e-124 448.4 430 82.8
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.1e-122 444.9 435 81.4
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.4e-122 444.5 429 82.8
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 2.4e-122 443.7 428 83.2
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.0e-121 440.7 435 80.7
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 1.9e-119 434.1 446 79.6
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 3.3e-119 433.3 421 85.3
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 5.5e-119 432.6 423 84.6
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 5.5e-119 432.6 468 77.4
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.8e-117 427.6 446 75.3
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 2.6e-116 423.7 448 79.5
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 2.2e-115 420.6 471 75.6
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 9.2e-114 415.2 450 75.3
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 1.2e-113 414.8 430 79.5
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 3.5e-113 413.3 451 74.9
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 7.8e-113 412.1 445 76.6
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 4.3e-111 406.4 445 76.4
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 7.3e-111 405.6 447 76.3
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 9.5e-111 405.2 455 73.6
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 3.0e-109 400.2 466 72.7
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 4.0e-109 399.8 466 72.7
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 2.0e-108 397.5 452 74.1
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 4.9e-107 392.9 453 72.8
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 1.8e-106 391.0 452 73.2
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 7.0e-106 389.0 404 81.9
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 2.7e-105 387.1 437 75.5
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 2.7e-105 387.1 470 71.1
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 6.0e-105 386.0 476 70.6
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.3e-104 384.8 447 72.0
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.3e-104 384.8 441 74.6
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.1e-103 381.7 449 73.1
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 5.6e-103 379.4 466 70.4
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 1.2e-102 378.3 437 75.5
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.6e-102 377.9 449 72.8
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 1.6e-102 377.9 449 71.7
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.0e-101 373.2 468 70.3
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 6.8e-101 372.5 448 71.9
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 8.9e-101 372.1 479 67.8
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.5e-100 371.3 468 69.9
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 2.6e-100 370.5 455 70.3
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 3.4e-100 370.2 448 72.3
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 5.8e-100 369.4 448 71.7
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 5.8e-100 369.4 448 71.7
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 1.3e-99 368.2 456 71.3
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 3.7e-99 366.7 444 72.7
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.4e-98 364.8 436 71.6
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 1.4e-98 364.8 455 70.1
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 7.0e-98 362.5 447 71.1
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.6e-97 361.3 434 72.8
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 3.5e-97 360.1 432 72.0
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 2.3e-96 357.5 445 69.7
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.5e-95 354.8 447 71.4
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 2.5e-95 354.0 455 70.1
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 3.3e-95 353.6 470 68.1
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 3.6e-94 350.1 426 72.5
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 5.2e-93 346.3 449 69.7
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 7.5e-92 342.4 439 71.3
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 9.9e-92 342.0 448 70.3
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 9.9e-92 342.0 456 69.5
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 1.3e-91 341.7 444 70.7
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.1e-90 338.6 547 49.9
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 1.1e-90 338.6 468 67.9
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 5.4e-90 336.3 449 68.8
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 7.1e-90 335.9 423 72.8
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 7.8e-89 332.4 404 74.5
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 1.7e-88 331.3 438 69.2
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 2.8e-86 323.9 404 73.3
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 1.8e-85 321.2 453 68.4
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 2.4e-85 320.9 406 72.7
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.2e-84 318.5 423 70.9
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 3.4e-84 317.0 425 60.5
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 2.9e-83 313.9 448 65.2
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 8.4e-83 312.4 422 70.4
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 5.4e-82 309.7 191 81.2
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 2.7e-81 307.4 399 72.2
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 5.1e-80 303.1 414 70.3
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 1.2e-78 298.5 398 70.1
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 8.1e-78 295.8 452 64.8
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 5.8e-76 289.7 457 48.4
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 5.8e-76 289.7 426 48.1
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.8e-62 244.2 240 55.0
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 8.1e-62 242.7 222 56.8
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 6.9e-53 213.0 406 63.5
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 8.7e-48 196.1 114 77.2
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.9e-47 194.9 114 78.9
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.8e-46 191.0 132 69.7
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 2.5e-42 177.9 114 72.8
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 3.2e-42 177.6 273 81.7
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 4.6e-41 173.7 408 57.6
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 6.1e-41 173.3 99 82.8
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 2.3e-40 171.4 114 72.8
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 2.6e-36 157.9 104 71.2
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 3.0e-32 144.4 234 37.2
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 1.0e-27 129.4 72 84.7
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 9.4e-26 122.9 76 71.1
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 4.7e-25 120.6 70 77.1
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.8e-22 111.3 67 74.6
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.4e-21 108.2 394 54.3
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 7.5e-07 60.1 162 30.9
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 1.7e-06 58.9 147 30.6
SMO364G0905 Selaginella moellendorffii HOM05D031156 ORTHO05D000355 8.3e-06 56.6 212 25.5


User provided reference genes

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