Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27384 Davidia involucrata HOM05D003597 ORTHO05D004420 4.0e-57 224.6 115 100.0
CSS0024515 Camellia sinensis var. sinensis HOM05D003597 ORTHO05D004420 4.5e-40 167.9 151 64.9
GSVIVG01008944001 Vitis vinifera HOM05D003597 ORTHO05D004420 1.5e-35 152.9 146 61.6
vmacro12529 Vaccinium macrocarpon HOM05D003597 ORTHO05D004420 1.3e-34 149.8 140 60.7
DCAR_014282 Daucus carota HOM05D003597 ORTHO05D004420 8.1e-34 147.1 143 58.7
Lj4C579G4 Lonicera japonica HOM05D003597 ORTHO05D004420 8.1e-34 147.1 144 59.7
Rhsim06G0109200 Rhododendron simsii HOM05D003597 ORTHO05D004420 8.1e-34 147.1 141 61.0
Cc00_g02330 Coffea canephora HOM05D003597 ORTHO05D004420 3.1e-33 145.2 145 57.2
Nitab4.5_0002496g0040 Nicotiana tabacum HOM05D003597 ORTHO05D004420 9.0e-33 143.7 145 57.9
Actinidia23041 Actinidia chinensis HOM05D003597 ORTHO05D004420 2.0e-32 142.5 143 58.7
SalBow7G0935 Salvia bowleyana HOM05D003597 ORTHO05D004420 2.6e-32 142.1 141 58.2
SalBow7G4807 Salvia bowleyana HOM05D003597 ORTHO05D004420 2.6e-32 142.1 141 58.2
Nitab4.5_0000051g0110 Nicotiana tabacum HOM05D003597 ORTHO05D004420 4.5e-32 141.4 145 57.9
MSTRG.25418 Avicennia marina HOM05D003597 ORTHO05D004420 2.2e-31 139.0 145 55.9
Solyc11g013530.3 Solanum lycopersicum HOM05D003597 ORTHO05D004420 3.8e-31 138.3 144 56.2
Sopen11g008560 Solanum pennellii HOM05D003597 ORTHO05D004420 3.8e-31 138.3 144 56.2
TAR197G0005 Trochodendron aralioides HOM05D003597 ORTHO05D004420 3.8e-31 138.3 133 59.4
Oeu030027.4 Olea europaea HOM05D003597 ORTHO05D004420 8.4e-31 137.1 145 56.6
Cfa015958 Carpinus fangiana HOM05D003597 ORTHO05D004420 1.1e-30 136.7 146 60.3
Manes.18G072800 Manihot esculenta HOM05D003597 ORTHO05D004420 1.2e-29 133.3 138 55.1
Potri.002G089400 Populus trichocarpa HOM05D003597 ORTHO05D004420 2.1e-29 132.5 145 54.5
Aqoxy5G02474 Aquilegia oxysepala HOM05D003597 ORTHO05D004420 2.7e-29 132.1 146 54.1
Cpa.g.c31003 Carica papaya HOM05D003597 ORTHO05D004420 3.5e-29 131.7 145 53.8
Nn5g27956 Nelumbo nucifera HOM05D003597 ORTHO05D004420 6.0e-29 131.0 108 62.0
TWI36G0588 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 6.0e-29 131.0 145 53.8
CAN.G255.18 Capsicum annuum HOM05D003597 ORTHO05D004420 1.8e-28 129.4 144 53.5
TWI12G1217 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 1.8e-28 129.4 146 53.4
TWI56G1037 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 1.8e-28 129.4 139 54.0
MBI06_g01044_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 2.3e-28 129.0 143 51.7
MD08G1173200 Malus domestica HOM05D003597 ORTHO05D004420 3.0e-28 128.6 145 53.1
Oeu043794.4 Olea europaea HOM05D003597 ORTHO05D004420 3.0e-28 128.6 143 54.5
MBI03_g11136_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 3.9e-28 128.3 145 55.2
Haze_00525 Corylus avellana HOM05D003597 ORTHO05D004420 5.1e-28 127.9 139 59.0
Potri.005G171800 Populus trichocarpa HOM05D003597 ORTHO05D004420 5.1e-28 127.9 143 52.4
Prupe.1G506100 Prunus persica HOM05D003597 ORTHO05D004420 6.7e-28 127.5 146 52.7
QL12p035319 Quercus lobata HOM05D003597 ORTHO05D004420 1.1e-27 126.7 144 54.2
Sabra02G0070400 Salix brachista HOM05D003597 ORTHO05D004420 1.9e-27 125.9 140 52.1
Sabra05G0129300 Salix brachista HOM05D003597 ORTHO05D004420 3.3e-27 125.2 143 51.7
Migut.C01191 Erythranthe guttata HOM05D003597 ORTHO05D004420 1.6e-26 122.9 131 56.5
Thecc.08G116700 Theobroma cacao HOM05D003597 ORTHO05D004420 2.1e-26 122.5 145 53.1
CANSAT25G1161 Cannabis sativa HOM05D003597 ORTHO05D004420 4.8e-26 121.3 145 51.7
RcHm_v2.0_Chr7g0240911 Rosa chinensis HOM05D003597 ORTHO05D004420 6.3e-26 120.9 146 50.7
Atru.chr13.1317 Acer truncatum HOM05D003597 ORTHO05D004420 1.8e-25 119.4 139 51.1
Atru.chr13.1361 Acer truncatum HOM05D003597 ORTHO05D004420 1.8e-25 119.4 139 51.1
COL.COLO4_03393 Corchorus olitorius HOM05D003597 ORTHO05D004420 5.3e-25 117.9 145 51.0
Glyma.04G253800 Glycine max HOM05D003597 ORTHO05D004420 5.3e-25 117.9 144 47.2
Duzib093G1782 Durio zibethinus HOM05D003597 ORTHO05D004420 6.9e-25 117.5 141 51.8
FvH4_5g38940 Fragaria vesca HOM05D003597 ORTHO05D004420 6.9e-25 117.5 146 50.7
FAN18G1206 Fragaria x ananassa HOM05D003597 ORTHO05D004420 6.9e-25 117.5 146 50.7
DCAR_031233 Daucus carota HOM05D003597 ORTHO05D004420 9.0e-25 117.1 136 53.7
Gohir.D06G041800 Gossypium hirsutum HOM05D003597 ORTHO05D004420 9.0e-25 117.1 145 51.0
Gorai.010G047000 Gossypium raimondii HOM05D003597 ORTHO05D004420 9.0e-25 117.1 145 51.0
SGA_v2.0_scaffold118G32437 Striga asiatica HOM05D003597 ORTHO05D004420 1.5e-24 116.3 130 55.4
Gohir.A06G040800 Gossypium hirsutum HOM05D003597 ORTHO05D004420 2.0e-24 115.9 145 51.0
MELO3C022786.2 Cucumis melo HOM05D003597 ORTHO05D004420 2.6e-24 115.5 141 48.9
Lalb_Chr08g0241721 Lupinus albus HOM05D003597 ORTHO05D004420 2.6e-24 115.5 141 48.2
ECA246G2386 Erigeron canadensis HOM05D003597 ORTHO05D004420 3.4e-24 115.2 126 54.0
Carub.0002s2470 Capsella rubella HOM05D003597 ORTHO05D004420 4.5e-24 114.8 152 46.7
FAN13G2877 Fragaria x ananassa HOM05D003597 ORTHO05D004420 4.5e-24 114.8 146 50.0
VMungo1309G0254 Vigna mungo HOM05D003597 ORTHO05D004420 4.5e-24 114.8 144 47.2
Gorai.002G220300 Gossypium raimondii HOM05D003597 ORTHO05D004420 5.9e-24 114.4 145 51.0
PSO170G0537 Papaver somniferum HOM05D003597 ORTHO05D004420 5.9e-24 114.4 148 47.3
Gohir.A01G187600 Gossypium hirsutum HOM05D003597 ORTHO05D004420 7.6e-24 114.0 145 51.0
Phvul.009G025800 Phaseolus vulgaris HOM05D003597 ORTHO05D004420 7.6e-24 114.0 141 48.2
MD15G1358500 Malus domestica HOM05D003597 ORTHO05D004420 1.0e-23 113.6 90 66.7
ClCG03G009090 Citrullus lanatus HOM05D003597 ORTHO05D004420 1.3e-23 113.2 141 47.5
Gohir.D01G182100 Gossypium hirsutum HOM05D003597 ORTHO05D004420 1.7e-23 112.8 145 50.3
PSO017G6492 Papaver somniferum HOM05D003597 ORTHO05D004420 1.7e-23 112.8 148 46.6
Glyma.06G108500 Glycine max HOM05D003597 ORTHO05D004420 2.9e-23 112.1 144 45.1
Lj1g0013609 Lotus japonicus HOM05D003597 ORTHO05D004420 2.9e-23 112.1 146 46.6
Sed0005676 Sechium edule HOM05D003597 ORTHO05D004420 2.9e-23 112.1 141 47.5
Duzib041G0227 Durio zibethinus HOM05D003597 ORTHO05D004420 8.4e-23 110.5 145 49.7
FAN04G0001 Fragaria x ananassa HOM05D003597 ORTHO05D004420 1.1e-22 110.2 146 49.3
CsaV3_5G023530 Cucumis sativus L. HOM05D003597 ORTHO05D004420 1.9e-22 109.4 141 46.1
Ciclev10000027m.g Citrus clementina HOM05D003597 ORTHO05D004420 2.5e-22 109.0 145 45.5
Eucgr.F03741 Eucalyptus grandis HOM05D003597 ORTHO05D004420 2.5e-22 109.0 144 47.2
Lsat_1_v5_gn_6_109621 Lactuca sativa HOM05D003597 ORTHO05D004420 5.5e-22 107.8 164 46.3
Thhalv10018012m.g Eutrema salsugineum HOM05D003597 ORTHO05D004420 1.6e-21 106.3 157 43.9
Medtr3g073320 Medicago truncatula HOM05D003597 ORTHO05D004420 1.6e-21 106.3 148 46.6
THA.LOC104800176 Tarenaya hassleriana HOM05D003597 ORTHO05D004420 1.6e-21 106.3 146 45.9
Sc01g0001560 Simmondsia chinensis HOM05D003597 ORTHO05D004420 2.7e-21 105.5 129 48.1
Ca_25762_v3 Cicer arietinum L. HOM05D003597 ORTHO05D004420 4.6e-21 104.8 148 45.9
Hund27061 Selenicereus undatus HOM05D003597 ORTHO05D004420 4.6e-21 104.8 134 47.8
CiPaw.05G229100 Carya illinoinensis HOM05D003597 ORTHO05D004420 6.1e-21 104.4 125 52.8
arahy.Tifrunner.gnm1.ann1.WJPD8A Arachis hypogaea HOM05D003597 ORTHO05D004420 1.0e-20 103.6 131 51.1
TPR.G32944 Trifolium pratense HOM05D003597 ORTHO05D004420 1.0e-20 103.6 135 48.1
Sp5g32980 Schrenkiella parvula HOM05D003597 ORTHO05D004420 1.3e-20 103.2 153 44.4
HanXRQChr05g0150511 Helianthus annuus HOM05D003597 ORTHO05D004420 3.0e-20 102.1 129 48.8
Aa31LG4G7900 Aethionema arabicum HOM05D003597 ORTHO05D004420 1.1e-19 100.1 130 46.2
BcaC03g15776 Brassica carinata HOM05D003597 ORTHO05D004420 1.5e-19 99.8 134 44.8
A02p21890 Brassica napus HOM05D003597 ORTHO05D004420 1.9e-19 99.4 134 44.0
BcaC08g47623 Brassica carinata HOM05D003597 ORTHO05D004420 2.5e-19 99.0 129 45.0
C06p51740 Brassica napus HOM05D003597 ORTHO05D004420 2.5e-19 99.0 129 45.0
AT1G77800 Arabidopsis thaliana HOM05D003597 ORTHO05D004420 5.7e-19 97.8 137 44.5
A07p43090 Brassica napus HOM05D003597 ORTHO05D004420 5.7e-19 97.8 123 47.2
C02p35180 Brassica napus HOM05D003597 ORTHO05D004420 9.7e-19 97.1 134 43.3
BcaB05g25080 Brassica carinata HOM05D003597 ORTHO05D004420 1.3e-18 96.7 126 45.2
AUR62004693 Chenopodium quinoa HOM05D003597 ORTHO05D004420 1.3e-18 96.7 128 47.7
BcaB03g15920 Brassica carinata HOM05D003597 ORTHO05D004420 1.6e-18 96.3 122 45.9
CDE06G0857 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 2.8e-18 95.5 110 50.9
AUR62023609 Chenopodium quinoa HOM05D003597 ORTHO05D004420 3.7e-18 95.1 128 46.9
BolC2t09533H Brassica oleracea HOM05D003597 ORTHO05D004420 4.8e-18 94.7 135 44.4
BraA02t07190Z Brassica rapa HOM05D003597 ORTHO05D004420 4.8e-18 94.7 135 43.7
BolC6t40196H Brassica oleracea HOM05D003597 ORTHO05D004420 6.3e-18 94.4 130 44.6
THA.LOC104813639 Tarenaya hassleriana HOM05D003597 ORTHO05D004420 8.2e-18 94.0 152 40.8
AL2G38040 Arabidopsis lyrata HOM05D003597 ORTHO05D004420 1.4e-17 93.2 137 43.8
BraA07t31831Z Brassica rapa HOM05D003597 ORTHO05D004420 1.4e-17 93.2 124 46.8
EL10Ac1g00040 Beta vulgaris HOM05D003597 ORTHO05D004420 1.8e-17 92.8 143 43.4
PGR042G3777 Punica granatum HOM05D003597 ORTHO05D004420 1.8e-17 92.8 151 45.0
Peaxi162Scf00476g00039 Petunia axillaris HOM05D003597 ORTHO05D004420 5.3e-17 91.3 115 49.6
Ah.05g172620 Amaranthus hybridus HOM05D003597 ORTHO05D004420 1.2e-16 90.1 138 42.8
CDE06G1078 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 1.5e-16 89.7 99 51.5
ATR0121G011 Amborella trichopoda HOM05D003597 ORTHO05D004420 7.7e-16 87.4 135 40.7
Lalb_Chr17g0344031 Lupinus albus HOM05D003597 ORTHO05D004420 2.2e-15 85.9 127 44.9
HPP92_004120 Vanilla planifolia HOM05D003597 ORTHO05D004420 2.2e-15 85.9 141 41.8
CSS0035700 Camellia sinensis var. sinensis HOM05D003597 ORTHO05D004420 3.6e-13 78.6 126 48.4
HPP92_004068 Vanilla planifolia HOM05D003597 ORTHO05D004420 1.0e-12 77.0 117 43.6
Zm00001eb193530 Zea mays HOM05D003597 ORTHO05D004420 1.8e-12 76.3 126 41.3
Zm00001eb256170 Zea mays HOM05D003597 ORTHO05D004420 1.1e-11 73.6 120 40.8
CSS0017753 Camellia sinensis var. sinensis HOM05D003597 ORTHO05D004420 2.5e-11 72.4 113 49.6
Lalb_Chr11g0065681 Lupinus albus HOM05D003597 ORTHO05D004420 3.3e-11 72.0 52 61.5
SHI48839 Sapria himalayana HOM05D003597 ORTHO05D004420 6.3e-10 67.8 124 37.1
MSTRG.1487 Avicennia marina HOM05D003597 ORTHO05D004420 3.2e-06 55.5 89 43.8


User provided reference genes

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