Gene: AT1G77800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G77800
  • Transcript Identifier AT1G77800.1
  • Gene Type Coding gene
  • Location Chr1 : 29253800-29260190 : positive

Gene Family Information

  • ID HOM05D003597
  • #Genes/#Species 191/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G77800.1
  • uniprot F4I8J3

Descriptions

  • Description PHD finger family protein
  • Computational description PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 3411 Blast hits to 1845 proteins in 212 species: Archae - 0; Bacteria - 3; Metazoa - 1916; Fungi - 635; Plants - 520; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011011 Zinc finger, FYVE/PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
Mapman id Description
35.1 not assigned.annotated