Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27050 Davidia involucrata HOM05D004104 ORTHO05D004755 1.4e-79 299.7 159 100.0
Lsat_1_v5_gn_3_120420 Lactuca sativa HOM05D004104 ORTHO05D004755 5.5e-65 251.1 155 83.9
HanXRQChr03g0091411 Helianthus annuus HOM05D004104 ORTHO05D004755 1.8e-63 246.1 155 81.3
CiPaw.01G185000 Carya illinoinensis HOM05D004104 ORTHO05D004755 6.8e-63 244.2 159 81.1
GSVIVG01027809001 Vitis vinifera HOM05D004104 ORTHO05D004755 6.8e-63 244.2 157 82.8
ECA240G4332 Erigeron canadensis HOM05D004104 ORTHO05D004755 8.8e-63 243.8 155 80.6
Haze_11377 Corylus avellana HOM05D004104 ORTHO05D004755 4.9e-61 238.0 159 79.2
Rhsim02G0037300 Rhododendron simsii HOM05D004104 ORTHO05D004755 1.4e-60 236.5 159 77.4
Atru.chr4.2063 Acer truncatum HOM05D004104 ORTHO05D004755 2.7e-59 232.3 161 77.0
Actinidia01846 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.7e-59 232.3 159 76.7
Nitab4.5_0001005g0090 Nicotiana tabacum HOM05D004104 ORTHO05D004755 3.5e-59 231.9 159 79.2
Thecc.04G255000 Theobroma cacao HOM05D004104 ORTHO05D004755 5.9e-59 231.1 157 79.0
Cc03_g05510 Coffea canephora HOM05D004104 ORTHO05D004755 1.3e-58 229.9 159 75.5
Nitab4.5_0000044g0340 Nicotiana tabacum HOM05D004104 ORTHO05D004755 2.9e-58 228.8 159 78.6
Duzib052G0511 Durio zibethinus HOM05D004104 ORTHO05D004755 5.0e-58 228.0 157 79.0
Sopen09g033030 Solanum pennellii HOM05D004104 ORTHO05D004755 5.5e-57 224.6 159 77.4
COL.COLO4_15874 Corchorus olitorius HOM05D004104 ORTHO05D004755 1.2e-56 223.4 157 77.1
Solyc09g090120.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 2.8e-56 222.2 159 76.7
vmacro15441 Vaccinium macrocarpon HOM05D004104 ORTHO05D004755 3.6e-56 221.9 154 77.9
Gohir.D02G045400 Gossypium hirsutum HOM05D004104 ORTHO05D004755 4.7e-56 221.5 157 75.2
Gorai.005G050100 Gossypium raimondii HOM05D004104 ORTHO05D004755 4.7e-56 221.5 157 75.2
CiPaw.03G263800 Carya illinoinensis HOM05D004104 ORTHO05D004755 1.4e-55 219.9 157 74.5
Ca_09682_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 1.4e-55 219.9 157 73.9
Lalb_Chr21g0313851 Lupinus albus HOM05D004104 ORTHO05D004755 2.3e-55 219.2 157 73.9
VMungo0720G2373 Vigna mungo HOM05D004104 ORTHO05D004755 2.3e-55 219.2 157 74.5
Gohir.A02G039300 Gossypium hirsutum HOM05D004104 ORTHO05D004755 4.0e-55 218.4 157 74.5
Phvul.007G193100 Phaseolus vulgaris HOM05D004104 ORTHO05D004755 4.0e-55 218.4 157 73.9
QL06p017873 Quercus lobata HOM05D004104 ORTHO05D004755 5.2e-55 218.0 158 74.7
Aqoxy2G03638 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 6.8e-55 217.6 159 76.7
PSO357G0016 Papaver somniferum HOM05D004104 ORTHO05D004755 1.2e-54 216.9 161 77.0
TWI12G1345 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 1.5e-54 216.5 157 72.6
Medtr1g069925 Medicago truncatula HOM05D004104 ORTHO05D004755 2.6e-54 215.7 157 72.6
TPR.G24709 Trifolium pratense HOM05D004104 ORTHO05D004755 2.6e-54 215.7 156 73.7
PSO170G1063 Papaver somniferum HOM05D004104 ORTHO05D004755 4.4e-54 214.9 161 76.4
Duzib151G0362 Durio zibethinus HOM05D004104 ORTHO05D004755 5.7e-54 214.5 157 74.5
CsaV3_7G027350 Cucumis sativus L. HOM05D004104 ORTHO05D004755 9.8e-54 213.8 157 72.0
Glyma.10G036900 Glycine max HOM05D004104 ORTHO05D004755 9.8e-54 213.8 157 72.6
Psat6g055120 Pisum sativum HOM05D004104 ORTHO05D004755 9.8e-54 213.8 157 72.0
arahy.Tifrunner.gnm1.ann1.QEJR01 Arachis hypogaea HOM05D004104 ORTHO05D004755 1.3e-53 213.4 157 71.3
ClCG09G007780 Citrullus lanatus HOM05D000113 ORTHO05D004634 1.3e-53 213.4 157 71.3
QL09p038638 Quercus lobata HOM05D004104 ORTHO05D004755 1.7e-53 213.0 157 72.6
Lj5g0006581 Lotus japonicus HOM05D004104 ORTHO05D004755 3.7e-53 211.8 154 73.4
Manes.12G032000 Manihot esculenta HOM05D004104 ORTHO05D004755 3.7e-53 211.8 156 72.4
TPR.G6322 Trifolium pratense HOM05D004104 ORTHO05D004755 6.3e-53 211.1 156 72.4
Cpa.g.sc50.23 Carica papaya HOM05D004104 ORTHO05D004755 8.3e-53 210.7 157 71.3
Ca_09886_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 1.1e-52 210.3 155 73.5
TAR636G3439 Trochodendron aralioides HOM05D004104 ORTHO05D004755 2.4e-52 209.1 155 76.1
GSVIVG01028325001 Vitis vinifera HOM05D004104 ORTHO05D004755 3.2e-52 208.8 155 72.3
Atru.chr5.1672 Acer truncatum HOM05D004104 ORTHO05D004755 5.4e-52 208.0 157 72.0
SEGI_09266 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 1.2e-51 206.8 155 71.0
Sed0024271 Sechium edule HOM05D004104 ORTHO05D004755 2.0e-51 206.1 157 68.8
Prupe.8G224100 Prunus persica HOM05D004104 ORTHO05D004755 3.5e-51 205.3 157 70.7
Aqoxy2G03648 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 5.9e-51 204.5 155 76.1
Eucgr.K03263 Eucalyptus grandis HOM05D004104 ORTHO05D004755 5.9e-51 204.5 156 73.1
Potri.002G038700 Populus trichocarpa HOM05D004104 ORTHO05D004755 5.9e-51 204.5 157 70.7
CANSAT01G3088 Cannabis sativa HOM05D004104 ORTHO05D004755 1.0e-50 203.8 157 69.4
PGR044G0499 Punica granatum HOM05D004104 ORTHO05D004755 1.0e-50 203.8 156 72.4
THA.LOC104822244 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 1.0e-50 203.8 157 71.3
Thecc.01G258800 Theobroma cacao HOM05D004104 ORTHO05D004755 1.0e-50 203.8 158 70.9
arahy.Tifrunner.gnm1.ann1.0Z487T Arachis hypogaea HOM05D000348 ORTHO05D000244 1.3e-50 203.4 153 70.6
SalBow3G2247 Salvia bowleyana HOM05D004104 ORTHO05D004755 2.3e-50 202.6 155 68.4
CDE04G2476 Ceratophyllum demersum HOM05D004104 ORTHO05D004755 2.9e-50 202.2 159 69.8
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 2.9e-50 202.2 146 74.0
Potri.005G223900 Populus trichocarpa HOM05D004104 ORTHO05D004755 2.9e-50 202.2 157 70.1
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 3.9e-50 201.8 158 70.9
arahy.Tifrunner.gnm1.ann1.6K1PAL Arachis hypogaea HOM05D000348 ORTHO05D000244 6.6e-50 201.1 153 69.9
Migut.G00520 Erythranthe guttata HOM05D004104 ORTHO05D004755 6.6e-50 201.1 155 69.7
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 1.5e-49 199.9 158 70.3
RcHm_v2.0_Chr6g0288171 Rosa chinensis HOM05D004104 ORTHO05D004755 1.9e-49 199.5 155 72.3
Glyma.13G123300 Glycine max HOM05D004104 ORTHO05D004755 7.3e-49 197.6 143 73.4
AT4G14385 Arabidopsis thaliana HOM05D004104 ORTHO05D004755 9.5e-49 197.2 156 68.6
FAN20G0124 Fragaria x ananassa HOM05D004104 ORTHO05D004755 9.5e-49 197.2 155 70.3
TAR365G1233 Trochodendron aralioides HOM05D004104 ORTHO05D004755 9.5e-49 197.2 154 72.1
Aa31LG9G2930 Aethionema arabicum HOM05D004104 ORTHO05D004755 1.2e-48 196.8 156 68.6
Ciclev10006103m.g Citrus clementina HOM05D004104 ORTHO05D004755 2.1e-48 196.1 156 67.9
AL7G41830 Arabidopsis lyrata HOM05D004104 ORTHO05D004755 2.8e-48 195.7 155 68.4
Duzib211G0552 Durio zibethinus HOM05D004104 ORTHO05D004755 3.6e-48 195.3 158 69.0
Rhsim01G0264300 Rhododendron simsii HOM05D004104 ORTHO05D004755 8.0e-48 194.1 155 70.3
MD10G1184400 Malus domestica HOM05D004104 ORTHO05D004755 1.4e-47 193.4 157 70.1
Ciclev10023660m.g Citrus clementina HOM05D004104 ORTHO05D004755 3.1e-47 192.2 172 65.1
Sabra02G0031000 Salix brachista HOM05D004104 ORTHO05D004755 5.2e-47 191.4 157 66.9
MD05G1197800 Malus domestica HOM05D004104 ORTHO05D004755 2.0e-46 189.5 160 68.1
Gohir.A08G190000 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.6e-46 189.1 157 68.8
Actinidia25786 Actinidia chinensis HOM05D004104 ORTHO05D004755 3.4e-46 188.7 158 67.1
Gohir.D08G208500 Gossypium hirsutum HOM05D004104 ORTHO05D004755 4.4e-46 188.3 157 68.2
Gorai.004G220900 Gossypium raimondii HOM05D004104 ORTHO05D004755 4.4e-46 188.3 157 68.2
Manes.03G164300 Manihot esculenta HOM05D004104 ORTHO05D004755 4.4e-46 188.3 141 72.3
EL10Ac5g10403 Beta vulgaris HOM05D004104 ORTHO05D004755 9.8e-46 187.2 155 66.5
Cc06_g07960 Coffea canephora HOM05D004104 ORTHO05D004755 1.7e-45 186.4 155 68.4
Nitab4.5_0000470g0160 Nicotiana tabacum HOM05D004104 ORTHO05D004755 1.7e-45 186.4 155 65.8
MSTRG.9892 Avicennia marina HOM05D004104 ORTHO05D004755 2.2e-45 186.0 141 71.6
Solyc09g072580.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 2.2e-45 186.0 155 65.8
Sopen09g028390 Solanum pennellii HOM05D004104 ORTHO05D004755 2.2e-45 186.0 155 65.8
PGSC0003DMG400010299 Solanum tuberosum HOM05D004104 ORTHO05D004755 2.2e-45 186.0 155 65.8
Nitab4.5_0009483g0030 Nicotiana tabacum HOM05D004104 ORTHO05D004755 6.4e-45 184.5 155 65.2
AUR62011875 Chenopodium quinoa HOM05D004104 ORTHO05D004755 5.4e-44 181.4 155 65.2
A04p07650 Brassica napus HOM05D004104 ORTHO05D004755 7.0e-44 181.0 183 60.7
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 9.2e-44 180.6 202 55.4
Os01g0233400 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 9.2e-44 180.6 146 69.2
Os12g0298600 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 9.2e-44 180.6 146 69.2
Sabra05G0172700 Salix brachista HOM05D004104 ORTHO05D004755 9.2e-44 180.6 222 51.4
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 7.8e-43 177.6 129 75.2
Nn3g19649 Nelumbo nucifera HOM05D004104 ORTHO05D004755 1.3e-42 176.8 123 78.9
Hund11888 Selenicereus undatus HOM05D004104 ORTHO05D004755 3.0e-42 175.6 133 74.4
CSS0037223 Camellia sinensis var. sinensis HOM05D004104 ORTHO05D004755 6.6e-42 174.5 155 63.9
Hund02913 Selenicereus undatus HOM05D004104 ORTHO05D004755 3.3e-41 172.2 160 62.5
BolC4t25712H Brassica oleracea HOM05D004104 ORTHO05D004755 4.3e-41 171.8 112 78.6
SalBow4G1878 Salvia bowleyana HOM05D004104 ORTHO05D004755 5.6e-41 171.4 155 65.2
Thhalv10026437m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 2.1e-40 169.5 153 62.1
CARHR220610 Cardamine hirsuta HOM05D004104 ORTHO05D004755 3.6e-40 168.7 153 60.8
Actinidia32304 Actinidia chinensis HOM05D004104 ORTHO05D004755 6.2e-40 167.9 127 71.7
MSTRG.21496 Avicennia marina HOM05D004104 ORTHO05D004755 8.1e-40 167.5 155 63.9
Dinv29861 Davidia involucrata HOM05D004104 ORTHO05D004755 1.1e-39 167.2 96 89.6
Migut.D00423 Erythranthe guttata HOM05D004104 ORTHO05D004755 1.1e-39 167.2 155 63.9
Pp3c8_15220 Physcomitrium patens HOM05D004104 ORTHO05D004755 1.8e-39 166.4 158 61.4
Carub.0007s2785 Capsella rubella HOM05D004104 ORTHO05D004755 2.3e-39 166.0 153 59.5
SGA_v2.0_scaffold138G35232 Striga asiatica HOM05D000374 ORTHO05D000238 2.3e-39 166.0 155 63.9
SGA_v2.0_scaffold1G00613 Striga asiatica HOM05D004104 ORTHO05D004755 4.0e-39 165.2 155 63.9
HanXRQChr04g0112651 Helianthus annuus HOM05D004104 ORTHO05D004755 6.8e-39 164.5 155 61.9
unitig_21.g20174 Utricularia gibba HOM05D004104 ORTHO05D004755 6.8e-39 164.5 153 60.1
BcaC02g09319 Brassica carinata HOM05D004104 ORTHO05D004755 8.9e-39 164.1 153 62.1
C04p41340 Brassica napus HOM05D004104 ORTHO05D004755 8.9e-39 164.1 153 62.1
BraA04t16456Z Brassica rapa HOM05D004104 ORTHO05D004755 8.9e-39 164.1 153 62.1
Sp7g12470 Schrenkiella parvula HOM05D004104 ORTHO05D004755 1.5e-38 163.3 153 60.8
HPP92_004791 Vanilla planifolia HOM05D004104 ORTHO05D004755 1.5e-38 163.3 125 72.0
BcaB02g08611 Brassica carinata HOM05D004104 ORTHO05D004755 2.0e-38 162.9 154 61.7
TWI18G1001 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 2.6e-38 162.5 159 58.5
MSTRG.18320 Avicennia marina HOM05D004104 ORTHO05D004755 5.8e-38 161.4 155 63.9
AUR62002135 Chenopodium quinoa HOM05D004104 ORTHO05D004755 1.7e-37 159.8 174 56.9
AagrBONN_evm.TU.Sc2ySwM_228.2514 Anthoceros agrestis HOM05D004104 ORTHO05D004755 6.4e-37 157.9 143 62.2
Mapoly0055s0054 Marchantia polymorpha HOM05D004104 ORTHO05D004755 8.3e-37 157.5 160 59.4
SGA_v2.0_scaffold67G22747 Striga asiatica HOM05D004104 ORTHO05D004755 1.9e-36 156.4 155 57.4
HPP92_008311 Vanilla planifolia HOM05D004104 ORTHO05D004755 1.9e-36 156.4 156 56.4
Peaxi162Scf00543g00310 Petunia axillaris HOM05D004104 ORTHO05D004755 5.4e-36 154.8 149 61.1
Ah.13g072460 Amaranthus hybridus HOM05D004104 ORTHO05D004755 1.2e-35 153.7 119 72.3
MBI10_g37181_MAGBIO Magnolia biondii HOM05D004104 ORTHO05D004755 1.2e-35 153.7 124 69.4
Lsat_1_v5_gn_8_92980 Lactuca sativa HOM05D004104 ORTHO05D004755 1.6e-35 153.3 156 59.6
PGSC0003DMG400017224 Solanum tuberosum HOM05D004104 ORTHO05D004755 2.1e-35 152.9 172 55.8
Pp3c24_15450 Physcomitrium patens HOM05D004104 ORTHO05D004755 2.7e-35 152.5 158 58.9
Gohir.A07G212800 Gossypium hirsutum HOM05D004104 ORTHO05D004755 3.5e-35 152.1 158 59.5
AagrBONN_evm.TU.Sc2ySwM_368.1944 Anthoceros agrestis HOM05D004104 ORTHO05D004755 4.6e-35 151.8 143 60.8
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 4.6e-35 151.8 156 60.3
arahy.Tifrunner.gnm1.ann1.2HR6HW Arachis hypogaea HOM05D004104 ORTHO05D004755 7.8e-35 151.0 184 50.5
MELO3C015732.2 Cucumis melo HOM05D004104 ORTHO05D004755 5.1e-34 148.3 269 40.1
CBR_g31961 Chara braunii HOM05D004104 ORTHO05D004755 6.6e-34 147.9 154 55.8
Lj1A66T60 Lonicera japonica HOM05D004104 ORTHO05D004755 6.6e-34 147.9 157 58.0
SEGI_16929 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 8.6e-34 147.5 98 77.6
ECA236G2125 Erigeron canadensis HOM05D004104 ORTHO05D004755 1.1e-33 147.1 159 57.9
Oeu011497.1 Olea europaea HOM05D004104 ORTHO05D004755 1.9e-33 146.4 102 75.5
Gorai.001G253400 Gossypium raimondii HOM05D004104 ORTHO05D004755 9.5e-33 144.1 166 56.0
Manes.13G033700 Manihot esculenta HOM05D004104 ORTHO05D004755 3.6e-32 142.1 93 79.6
AUR62015575 Chenopodium quinoa HOM05D004104 ORTHO05D004755 8.1e-32 141.0 99 74.7
THA.LOC104825278 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 2.3e-31 139.4 93 76.3
Ah.11g049720 Amaranthus hybridus HOM05D004104 ORTHO05D004755 6.8e-31 137.9 116 65.5
EL10Ac3g05008 Beta vulgaris HOM05D004104 ORTHO05D004755 6.8e-31 137.9 101 72.3
Ah.04g155820 Amaranthus hybridus HOM05D004104 ORTHO05D004755 8.9e-31 137.5 92 77.2
THA.LOC104825277 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 8.9e-31 137.5 175 51.4
Peaxi162Scf00855g00233 Petunia axillaris HOM05D004104 ORTHO05D004755 3.7e-29 132.1 166 51.2
Sc24g0003130 Simmondsia chinensis HOM05D004104 ORTHO05D004755 3.7e-29 132.1 93 73.1
CAN.G2012.3 Capsicum annuum HOM05D004104 ORTHO05D004755 6.4e-29 131.3 93 75.3
Gohir.D07G218900 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.2e-27 127.1 93 74.2
Dinv34620 Davidia involucrata HOM05D004104 ORTHO05D004755 8.1e-24 114.4 157 47.8
Duzib138G1233 Durio zibethinus HOM05D004104 ORTHO05D004755 1.1e-23 114.0 159 47.2
Thhalv10002280m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 1.1e-20 104.0 89 69.7
MCO10G151 Micromonas commoda HOM05D004104 ORTHO05D004755 2.7e-19 99.4 75 65.3
Thhalv10029502m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 7.8e-19 97.8 89 62.9
CAN.G896.9 Capsicum annuum HOM05D004104 ORTHO05D004755 1.7e-18 96.7 86 62.8
PRCOL_00002727 Prasinoderma coloniale HOM05D004104 ORTHO05D004755 4.0e-15 85.5 83 50.6
Gorai.003G083000 Gossypium raimondii HOM05D004104 ORTHO05D004755 6.9e-15 84.7 94 55.3
Zm00001eb188390 Zea mays HOM05D004104 ORTHO05D004755 1.5e-14 83.6 60 68.3
Gohir.D03G080833 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.0e-14 83.2 94 54.3
Actinidia11346 Actinidia chinensis HOM05D004104 ORTHO05D004755 5.8e-14 81.6 67 64.2
Aqoxy2G03647 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 3.9e-10 68.9 98 46.9
Cre07.g328450 Chlamydomonas reinhardtii HOM05D004104 ORTHO05D004755 8.1e-08 61.2 76 44.7
THA.LOC104825261 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 9.0e-07 57.8 88 43.2
arahy.Tifrunner.gnm1.ann1.A8QM82 Arachis hypogaea HOM05D004104 ORTHO05D004755 2.0e-06 56.6 45 60.0
Cre06.g291200 Chlamydomonas reinhardtii HOM05D004104 ORTHO05D004755 2.6e-06 56.2 75 48.0


User provided reference genes

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