Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 1.4e-209 732.6 346 100.0
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 3.1e-137 492.3 288 78.8
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.6e-136 489.2 288 78.5
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.4e-132 476.9 295 76.9
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.7e-130 468.8 294 73.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.1e-129 467.2 294 72.1
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.4e-129 466.8 299 73.2
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 3.8e-127 458.8 299 68.2
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 6.1e-125 451.4 305 70.8
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 1.4e-124 450.3 296 71.6
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 3.4e-120 435.6 294 69.4
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.3e-119 433.7 293 69.6
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 5.0e-119 431.8 295 66.4
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 6.5e-119 431.4 287 69.0
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 6.5e-119 431.4 294 68.4
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 8.5e-119 431.0 297 67.0
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.9e-118 429.9 300 67.3
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 9.4e-118 427.6 299 66.6
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 2.1e-117 426.4 294 69.7
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.1e-117 426.4 288 67.4
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 2.7e-117 426.0 274 70.1
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 3.0e-116 422.5 294 66.7
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 6.7e-116 421.4 306 65.0
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.1e-115 420.6 292 66.1
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.5e-115 420.2 297 64.6
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 4.4e-115 418.7 289 65.7
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 5.7e-115 418.3 289 65.7
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.3e-114 417.2 284 66.5
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 8.2e-114 414.5 270 70.0
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.1e-113 414.1 283 67.5
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 4.1e-113 412.1 298 63.4
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.0e-112 409.8 304 64.1
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.6e-112 409.5 294 65.3
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 7.7e-112 407.9 292 65.4
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 6.1e-109 398.3 300 63.7
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.0e-108 397.5 294 63.6
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.0e-108 397.5 294 63.6
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.8e-108 396.7 301 61.1
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 5.2e-108 395.2 278 64.7
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 6.7e-108 394.8 303 60.4
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.5e-107 393.7 290 63.1
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.0e-107 393.3 296 63.9
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 5.7e-107 391.7 292 62.7
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 4.8e-106 388.7 302 61.3
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.1e-105 387.5 292 62.0
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 7.0e-105 384.8 276 64.9
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 2.0e-104 383.3 240 73.3
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.0e-104 383.3 294 59.2
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 7.7e-104 381.3 294 61.6
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.1e-102 377.5 278 63.3
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 3.2e-102 375.9 283 64.7
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 2.1e-101 373.2 246 70.7
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 4.1e-97 359.0 237 68.8
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 2.9e-95 352.8 292 58.9
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.0e-92 344.4 254 63.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 8.9e-92 341.3 295 54.2
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 4.4e-91 339.0 281 55.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.8e-91 337.8 324 53.4
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.4e-89 334.0 264 59.8
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 6.6e-87 325.1 311 48.6
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 4.0e-84 315.8 232 63.4
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 5.0e-79 298.9 223 60.1
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 6.2e-77 292.0 276 49.3
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 6.8e-76 288.5 293 49.5
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 2.0e-75 287.0 219 60.7
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 2.6e-75 286.6 299 52.5
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 7.5e-67 258.5 185 62.7
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 4.9e-66 255.8 235 53.2
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 2.7e-64 250.0 281 42.3
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 3.0e-63 246.5 216 52.8
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 3.9e-63 246.1 380 37.9
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.4e-60 237.7 279 39.4
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.4e-60 237.7 276 39.9
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 6.4e-58 228.8 228 50.4
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 3.4e-43 179.9 161 57.8
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 3.5e-40 169.9 109 67.9
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 5.3e-36 156.0 107 68.2
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 8.2e-29 132.1 184 41.3
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 8.7e-23 112.1 64 76.6
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 3.7e-21 106.7 260 30.4
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 2.1e-16 90.9 66 63.6
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 4.5e-11 73.2 43 72.1
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.0e-10 72.0 45 66.7
TAR628G1214 Trochodendron aralioides HOM05D007847 ORTHO05D414451 7.9e-08 62.4 38 68.4
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 6.7e-07 59.3 44 56.8
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 7.4e-06 55.8 58 43.1


User provided reference genes

Program Settings