Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 5.1e-238 827.4 435 100.0
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 3.3e-221 771.5 435 91.7
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 2.5e-216 755.4 435 89.2
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 7.2e-216 753.8 435 89.2
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 9.4e-208 726.9 424 87.0
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 1.8e-203 712.6 423 85.1
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 3.1e-203 711.8 423 84.6
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 3.2e-200 701.8 432 81.5
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 1.0e-198 696.8 436 82.1
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 1.8e-198 696.0 423 82.7
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 6.8e-198 694.1 435 81.4
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 6.8e-198 694.1 435 80.2
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 1.2e-197 693.3 423 81.8
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 2.6e-197 692.2 435 80.2
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 2.6e-197 692.2 435 80.2
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 1.7e-196 689.5 422 83.6
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.2e-194 683.3 423 81.1
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 3.5e-194 681.8 435 78.9
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.3e-193 679.9 422 80.8
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 1.7e-193 679.5 423 82.0
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 2.9e-193 678.7 419 82.3
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 2.9e-193 678.7 430 80.2
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 6.6e-193 677.6 423 80.1
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 8.6e-193 677.2 420 80.0
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 1.9e-192 676.0 423 80.4
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 7.2e-192 674.1 435 78.9
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 2.8e-191 672.2 439 80.6
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 3.6e-191 671.8 423 80.6
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 4.7e-191 671.4 435 77.9
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 8.0e-191 670.6 423 80.9
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 1.4e-190 669.8 423 80.9
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 2.3e-190 669.1 423 79.0
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 7.5e-189 664.1 422 79.6
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 9.8e-189 663.7 423 77.8
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 9.8e-189 663.7 435 76.6
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 1.4e-187 659.8 422 79.4
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 5.4e-187 657.9 423 77.1
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 1.6e-186 656.4 423 77.8
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 1.6e-186 656.4 423 79.0
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.0e-185 653.7 423 77.1
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 2.9e-185 652.1 435 75.4
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 3.8e-185 651.7 422 78.7
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.1e-184 650.2 423 76.4
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 4.3e-184 648.3 422 77.0
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 5.6e-184 647.9 422 78.0
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 8.0e-183 644.0 423 77.8
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 1.4e-182 643.3 435 76.3
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 1.8e-182 642.9 436 74.5
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 1.8e-182 642.9 422 77.3
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 2.0e-181 639.4 423 75.7
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.4e-181 638.6 423 75.9
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 9.8e-181 637.1 424 77.6
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 9.8e-181 637.1 422 77.7
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 2.2e-180 636.0 424 74.5
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 2.2e-180 636.0 423 77.1
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 2.2e-180 636.0 457 73.5
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.1e-179 633.6 422 75.4
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 1.4e-179 633.3 423 76.1
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 3.2e-179 632.1 422 75.4
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 9.2e-179 630.6 423 76.6
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 9.2e-179 630.6 422 75.1
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 9.2e-179 630.6 446 74.2
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 1.2e-178 630.2 423 75.4
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 2.7e-178 629.0 422 75.1
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 1.3e-177 626.7 423 73.8
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 2.3e-177 625.9 435 76.1
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 3.9e-177 625.2 431 75.9
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 3.9e-177 625.2 424 75.2
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 8.6e-177 624.0 424 75.2
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 5.6e-176 621.3 423 75.2
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 6.2e-175 617.8 456 72.6
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 6.8e-174 614.4 423 76.1
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 3.4e-173 612.1 400 76.8
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 9.8e-173 610.5 435 73.8
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 2.4e-171 605.9 464 68.5
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 9.2e-171 604.0 424 73.6
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 1.6e-170 603.2 427 71.2
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 8.6e-169 597.4 420 69.8
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 8.6e-169 597.4 425 72.9
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 8.6e-169 597.4 423 73.0
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 1.1e-168 597.0 423 72.6
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 1.2e-167 593.6 424 73.3
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 5.2e-166 588.2 421 71.5
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 4.9e-164 581.6 420 68.3
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 1.4e-163 580.1 424 71.2
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 1.7e-161 573.2 381 77.2
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.5e-160 569.3 423 68.3
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 1.2e-159 567.0 424 68.6
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 1.8e-158 563.1 424 68.4
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 2.4e-158 562.8 424 68.9
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 4.0e-158 562.0 424 69.1
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 1.2e-157 560.5 424 67.7
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 1.5e-157 560.1 423 67.6
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 2.0e-157 559.7 425 67.8
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 4.4e-157 558.5 423 67.6
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 5.8e-157 558.1 425 67.5
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 7.6e-157 557.8 424 67.5
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 7.6e-157 557.8 421 65.1
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 1.3e-156 557.0 445 67.2
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 2.4e-155 552.7 424 66.7
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 4.2e-155 552.0 423 68.3
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 7.1e-155 551.2 423 68.3
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 6.6e-153 544.7 324 84.9
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 5.6e-152 541.6 423 65.2
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 9.6e-152 540.8 313 86.6
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 2.4e-150 536.2 424 65.8
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 3.1e-150 535.8 424 66.3
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 2.0e-149 533.1 424 65.8
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 4.4e-149 531.9 424 66.3
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 1.3e-148 530.4 423 65.0
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 1.3e-148 530.4 423 65.0
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 1.3e-148 530.4 423 64.5
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 1.7e-148 530.0 424 65.3
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 1.1e-147 527.3 423 64.8
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 1.4e-147 526.9 424 64.4
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 1.9e-147 526.6 424 64.4
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 4.6e-146 521.9 423 64.1
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 3.3e-144 515.8 444 61.7
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 5.6e-144 515.0 383 70.2
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 1.1e-142 510.8 387 68.2
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 2.4e-142 509.6 360 69.7
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 5.8e-133 478.4 425 58.1
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 2.9e-132 476.1 425 56.9
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 2.5e-131 473.0 424 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 2.1e-130 469.9 449 55.5
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 1.1e-126 457.6 386 65.0
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 6.5e-124 448.4 437 61.3
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 3.3e-120 436.0 398 60.6
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 2.2e-119 433.3 428 54.2
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 4.5e-117 425.6 239 90.4
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 2.5e-115 419.9 241 88.4
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 1.8e-113 413.7 281 72.2
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 1.1e-104 384.4 334 60.8
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 4.1e-102 375.9 355 58.6
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 6.5e-100 368.6 356 57.9
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.0e-69 267.3 214 65.4
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 2.7e-69 266.9 430 38.4
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 3.3e-67 260.0 325 48.6
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 4.1e-62 243.0 192 68.2
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 1.6e-58 231.1 341 39.3
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 4.0e-57 226.5 374 42.8
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 1.7e-55 221.1 194 62.4
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 4.7e-50 203.0 305 43.9
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 2.3e-49 200.7 194 57.2
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 1.7e-47 194.5 249 48.6
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 1.9e-46 191.0 139 66.2
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 5.1e-36 156.4 323 33.1
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 4.8e-34 149.8 150 56.0
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 1.7e-31 141.4 105 70.5
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 6.4e-31 139.4 119 58.8
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 3.3e-27 127.1 125 52.0
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 1.2e-24 118.6 76 75.0
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 5.8e-24 116.3 78 73.1
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 5.8e-24 116.3 78 73.1
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 3.1e-17 94.0 72 69.4
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 1.9e-14 84.7 48 87.5
Dinv09944 Davidia involucrata HOM05D002612 ORTHO05D002859 2.7e-13 80.9 48 87.5
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 6.7e-12 76.3 57 66.7
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 2.5e-11 74.3 53 75.5
FAN14G5770 Fragaria x ananassa HOM05D004649 ORTHO05D005446 6.3e-10 69.7 127 36.2
FvH4_6g52500 Fragaria vesca HOM05D004649 ORTHO05D005446 1.8e-09 68.2 48 64.6
ECA232G4246 Erigeron canadensis HOM05D004649 ORTHO05D005446 2.4e-09 67.8 75 50.7
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 4.1e-09 67.0 49 65.3
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 4.1e-09 67.0 49 65.3
EL10As11g23980 Beta vulgaris HOM05D004649 ORTHO05D005446 1.2e-08 65.5 37 75.7
Carub.0002s2288 Capsella rubella HOM05D002716 ORTHO05D003324 8.4e-07 59.3 203 29.1
Nn4g22394 Nelumbo nucifera HOM05D004649 ORTHO05D005446 8.4e-07 59.3 49 65.3
CARHR069530 Cardamine hirsuta HOM05D002716 ORTHO05D003324 2.5e-06 57.8 203 29.1
Thhalv10007479m.g Eutrema salsugineum HOM05D002716 ORTHO05D003324 2.5e-06 57.8 202 26.7
AL2G36010 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 3.2e-06 57.4 202 27.2
Carub.0001s1973 Capsella rubella HOM05D002716 ORTHO05D003324 4.2e-06 57.0 202 26.7
CARHR020700 Cardamine hirsuta HOM05D002716 ORTHO05D003324 4.2e-06 57.0 202 26.7
Sp1g17970 Schrenkiella parvula HOM05D002716 ORTHO05D003324 4.2e-06 57.0 202 26.7
AT1G20200 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 5.5e-06 56.6 202 26.7
AT1G75990 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 5.5e-06 56.6 202 26.7
AL1G33040 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 7.2e-06 56.2 202 26.7
BcaB03g12876 Brassica carinata HOM05D002716 ORTHO05D003324 7.2e-06 56.2 202 26.7
Sp5g31110 Schrenkiella parvula HOM05D002716 ORTHO05D003324 9.3e-06 55.8 213 26.3


User provided reference genes

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