Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.5e-109 399.4 190 100.0
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 2.3e-89 332.4 190 80.0
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.5e-88 329.7 190 78.4
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 8.9e-86 320.5 189 75.7
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.2e-85 320.1 190 77.4
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 4.4e-85 318.2 189 77.8
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 5.8e-85 317.8 187 80.2
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.7e-84 316.2 190 77.4
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 2.2e-84 315.8 190 77.9
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 2.9e-84 315.5 186 79.0
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 2.9e-84 315.5 189 76.2
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 3.7e-84 315.1 186 78.0
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 6.4e-84 314.3 190 74.2
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.1e-83 313.5 189 77.8
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.1e-83 313.5 190 75.8
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.4e-83 313.2 190 75.3
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.9e-83 312.8 190 74.2
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.9e-83 312.8 190 75.8
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.2e-83 312.0 188 77.7
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 3.2e-83 312.0 190 73.2
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 4.1e-83 311.6 190 76.3
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 5.4e-83 311.2 190 76.3
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 5.4e-83 311.2 189 73.5
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 9.2e-83 310.5 190 75.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.2e-82 310.1 189 76.2
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.2e-82 310.1 190 75.8
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-82 310.1 190 74.7
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.2e-82 310.1 190 74.7
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.2e-82 310.1 187 75.4
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 2.0e-82 309.3 187 75.4
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.7e-82 308.9 188 75.0
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 3.5e-82 308.5 187 74.9
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 4.6e-82 308.1 191 74.9
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 6.0e-82 307.8 228 66.7
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 7.8e-82 307.4 191 73.3
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 7.8e-82 307.4 190 72.6
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 7.8e-82 307.4 190 75.8
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.0e-81 307.0 190 75.8
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.3e-81 306.6 205 71.7
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.3e-81 306.6 190 76.8
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.3e-81 306.6 188 73.9
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 2.3e-81 305.8 187 73.3
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 3.0e-81 305.4 191 72.8
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 8.6e-81 303.9 190 71.6
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 8.6e-81 303.9 188 75.5
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.5e-80 303.1 189 75.7
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.5e-80 302.4 187 73.8
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.3e-80 301.6 189 72.5
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 9.5e-80 300.4 189 72.0
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 8.1e-79 297.4 186 73.1
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.1e-78 297.0 186 73.1
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.1e-78 297.0 189 71.4
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.4e-78 296.6 191 73.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.3e-78 295.8 187 71.7
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.3e-78 295.8 187 71.7
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 3.1e-78 295.4 186 73.7
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.4e-77 292.0 186 72.6
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.4e-77 291.6 190 72.1
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.7e-76 288.5 186 71.5
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.7e-76 288.5 186 69.9
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.9e-76 288.1 187 70.6
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 6.4e-76 287.7 190 68.4
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 8.3e-76 287.3 188 71.3
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 1.4e-75 286.6 187 70.1
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.4e-75 286.6 187 70.1
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 3.2e-75 285.4 188 68.6
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 3.2e-75 285.4 187 69.0
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 4.1e-75 285.0 189 70.4
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.6e-74 283.1 221 62.9
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 4.6e-74 281.6 184 69.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 6.0e-74 281.2 190 66.8
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 2.3e-73 279.3 190 66.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 3.0e-73 278.9 188 70.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 5.1e-73 278.1 190 67.9
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 5.1e-73 278.1 190 67.9
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 8.6e-73 277.3 190 66.3
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.5e-72 276.6 189 68.8
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.5e-72 276.6 189 69.3
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.9e-72 276.2 190 66.3
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 2.5e-72 275.8 191 68.6
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.2e-71 273.5 190 66.3
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 3.6e-71 271.9 190 65.3
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 6.2e-71 271.2 189 66.7
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.1e-70 270.4 188 69.7
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.4e-70 270.0 184 67.4
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.8e-70 269.6 190 63.7
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 2.3e-70 269.2 190 63.2
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 4.0e-70 268.5 190 63.7
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 4.0e-70 268.5 193 66.3
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.2e-69 266.9 190 63.2
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.2e-69 266.9 190 63.2
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 4.4e-69 265.0 190 65.8
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.4e-69 265.0 190 64.7
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 9.9e-69 263.8 191 62.8
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.2e-68 262.7 185 67.0
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 3.2e-67 258.8 185 65.4
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.4e-67 258.1 192 65.1
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.7e-66 255.8 188 66.0
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.1e-65 251.5 186 64.5
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.1e-64 250.4 186 61.8
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.3e-64 248.4 145 76.6
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.2e-63 246.9 186 61.8
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 3.4e-61 238.8 188 60.6
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 3.4e-61 238.8 146 71.2
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 3.4e-61 238.8 175 65.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.3e-60 236.9 186 61.3
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.4e-59 233.4 188 60.1
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 7.1e-59 231.1 188 59.6
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 2.7e-58 229.2 186 59.7
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 3.5e-58 228.8 186 61.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 3.5e-58 228.8 185 58.9
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.0e-57 227.3 185 57.8
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.6e-55 218.8 180 60.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 1.1e-54 217.2 187 54.5
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.4e-54 216.9 188 53.7
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.8e-54 216.5 186 54.3
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.2e-53 213.8 185 56.8
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 7.6e-53 211.1 192 55.7
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.7e-52 209.9 132 70.5
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 1.3e-36 157.1 111 62.2
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.6e-31 140.2 82 74.4
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 2.6e-29 132.9 82 74.4
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 4.5e-29 132.1 110 56.4
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.1e-26 123.2 99 63.6
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.8e-20 102.4 87 54.0
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.6e-18 95.9 105 48.6
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.1e-08 64.3 78 42.3
Actinidia39642 Actinidia chinensis HOM05D006185 ORTHO05D007572 2.2e-07 60.1 93 44.1


User provided reference genes

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