Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25022 Davidia involucrata HOM05D004807 ORTHO05D005915 1.7e-243 845.5 418 100.0
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 3.0e-179 632.1 395 81.3
Actinidia22072 Actinidia chinensis HOM05D004807 ORTHO05D005915 1.5e-178 629.8 403 78.7
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 1.1e-173 613.6 388 79.6
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 8.8e-171 604.0 390 80.3
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 3.7e-169 598.6 392 76.3
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 1.7e-166 589.7 399 74.9
Ciclev10011630m.g Citrus clementina HOM05D004807 ORTHO05D005915 1.5e-165 586.6 387 77.0
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 1.5e-165 586.6 387 76.2
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 9.5e-165 583.9 387 75.5
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 3.6e-164 582.0 387 74.9
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 4.7e-164 581.6 387 76.0
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 8.9e-163 577.4 403 72.5
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 1.2e-162 577.0 403 72.2
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 2.0e-162 576.2 403 73.2
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 2.9e-161 572.4 403 72.7
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 3.7e-161 572.0 403 71.7
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 3.7e-161 572.0 387 75.2
Cpa.g.sc85.18 Carica papaya HOM05D004807 ORTHO05D005915 6.4e-161 571.2 404 70.8
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 1.1e-160 570.5 387 75.7
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 1.4e-160 570.1 401 71.6
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 5.4e-160 568.2 402 71.6
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 7.0e-160 567.8 381 75.1
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 9.2e-160 567.4 383 75.7
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 1.6e-159 566.6 402 71.4
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 5.0e-158 561.6 386 73.6
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 5.6e-157 558.1 391 72.9
MELO3C009593.2 Cucumis melo HOM05D004807 ORTHO05D005915 7.3e-157 557.8 385 73.2
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 1.6e-156 556.6 387 72.1
RhsimUnG0014500 Rhododendron simsii HOM05D004807 ORTHO05D005915 2.1e-156 556.2 352 81.0
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 1.0e-155 553.9 386 73.1
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 1.0e-155 553.9 386 73.1
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 1.0e-155 553.9 388 70.9
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 2.3e-155 552.7 382 73.6
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 5.2e-155 551.6 387 72.6
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 6.8e-155 551.2 382 73.3
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 1.2e-154 550.4 389 71.7
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 1.5e-154 550.1 382 73.8
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 9.8e-154 547.4 381 73.2
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.9e-152 543.1 495 62.2
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 1.6e-151 540.0 387 70.5
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 3.5e-151 538.9 378 71.7
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 7.8e-151 537.7 404 69.3
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 1.0e-150 537.3 409 69.9
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 3.0e-150 535.8 378 71.2
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 3.3e-149 532.3 404 67.8
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.3e-149 531.9 404 68.6
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 2.8e-148 529.3 378 70.1
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 6.2e-148 528.1 382 69.6
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 6.2e-148 528.1 383 71.0
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 8.1e-148 527.7 388 67.8
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 8.1e-148 527.7 392 69.4
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 1.1e-147 527.3 395 70.1
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 1.4e-147 526.9 392 69.6
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 1.8e-147 526.6 389 68.6
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.8e-147 526.6 388 68.0
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 2.3e-147 526.2 378 69.8
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 4.0e-147 525.4 422 64.2
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.2e-146 523.9 438 63.9
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 3.4e-146 522.3 406 66.5
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.4e-146 521.9 438 63.7
Actinidia01589 Actinidia chinensis HOM05D004807 ORTHO05D005915 9.8e-146 520.8 387 69.3
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 9.8e-146 520.8 382 69.4
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 6.4e-145 518.1 402 66.2
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 1.1e-144 517.3 386 67.9
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 5.4e-144 515.0 402 65.2
CARHR086510 Cardamine hirsuta HOM05D004807 ORTHO05D005915 1.2e-143 513.8 389 66.1
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 1.2e-143 513.8 402 64.7
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 3.5e-143 512.3 381 68.0
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 6.0e-143 511.5 402 64.4
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 6.0e-143 511.5 402 64.4
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 1.0e-142 510.8 402 64.2
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 1.3e-142 510.4 378 68.3
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 2.3e-142 509.6 402 65.4
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 3.9e-142 508.8 402 64.2
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 5.1e-142 508.4 404 63.9
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 2.5e-141 506.1 398 64.8
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 1.6e-140 503.4 394 64.7
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 4.7e-140 501.9 376 66.8
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 6.8e-139 498.0 443 59.4
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 6.8e-139 498.0 403 65.5
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 1.3e-137 493.8 387 64.3
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 4.9e-137 491.9 380 66.8
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 1.2e-135 487.3 405 62.7
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 3.5e-135 485.7 404 62.1
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 4.6e-135 485.3 405 62.5
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 1.7e-134 483.4 330 76.1
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 2.3e-134 483.0 405 62.2
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 3.9e-134 482.3 415 61.2
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.5e-133 480.3 401 62.3
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 4.3e-133 478.8 401 62.1
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 5.6e-133 478.4 380 65.3
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 7.3e-133 478.0 415 60.7
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 1.1e-131 474.2 385 66.5
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 6.9e-131 471.5 381 64.6
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 4.6e-127 458.8 399 59.1
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 1.0e-126 457.6 399 62.7
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 1.7e-126 456.8 382 64.1
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 1.4e-115 420.6 403 58.3
CSS0045552 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 7.1e-104 381.7 265 73.2
SEGI_25187 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 4.6e-103 379.0 375 52.8
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 1.9e-101 373.6 274 70.4
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 1.1e-96 357.8 379 50.4
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 7.2e-96 355.1 244 73.0
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 2.1e-95 353.6 381 51.2
HPP92_017552 Vanilla planifolia HOM05D004807 ORTHO05D005915 2.5e-93 346.7 381 50.7
Lsat_1_v5_gn_3_12560 Lactuca sativa HOM05D004807 ORTHO05D005915 1.8e-86 323.9 273 63.4
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 6.7e-86 322.0 376 50.0
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 4.1e-75 286.2 400 41.0
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 2.0e-74 283.9 388 42.3
AagrBONN_evm.TU.Sc2ySwM_228.687 Anthoceros agrestis HOM05D004807 ORTHO05D005915 3.7e-68 263.1 380 40.8
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.4e-67 261.2 315 51.1
unitig_0.g510 Utricularia gibba HOM05D004807 ORTHO05D005915 2.7e-63 246.9 245 52.7
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 9.8e-61 238.4 243 53.5
Actinidia27127 Actinidia chinensis HOM05D004807 ORTHO05D005915 2.7e-58 230.3 147 80.3
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 2.3e-57 227.3 393 36.4
Haze_20075 Corylus avellana HOM05D004807 ORTHO05D005915 2.5e-40 170.6 129 68.2
TPR.G10577 Trifolium pratense HOM05D004807 ORTHO05D005915 2.3e-33 147.5 155 53.5
CSS0049837 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 1.7e-28 131.3 88 77.3
unitig_0.g509 Utricularia gibba HOM05D004807 ORTHO05D005915 5.4e-27 126.3 107 62.6
CBR_g51523 Chara braunii HOM05D000019 ORTHO05D000048 5.2e-22 109.8 155 41.3
arahy.Tifrunner.gnm1.ann1.WKN0A4 Arachis hypogaea HOM05D002533 ORTHO05D002855 3.9e-17 93.6 200 34.5
Cfa020119 Carpinus fangiana HOM05D004807 ORTHO05D021976 6.0e-10 69.7 89 44.9
vmacro12556 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 6.6e-09 66.2 40 85.0
Haze_20076 Corylus avellana HOM05D004807 ORTHO05D005915 2.1e-07 61.2 36 80.6
Hma1.2p1_0516F.1_g170580 Hydrangea macrophylla HOM05D004807 ORTHO05D005915 1.1e-06 58.9 50 62.0
Lsat_1_v5_gn_6_720 Lactuca sativa HOM05D004807 ORTHO05D005915 5.3e-06 56.6 41 63.4


User provided reference genes

Program Settings