Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.2e-121 439.9 228 100.0
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 8.2e-86 320.9 204 82.8
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 3.1e-85 318.9 204 81.9
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.2e-83 312.8 218 77.5
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 4.6e-81 305.1 195 84.1
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 2.2e-78 296.2 211 77.3
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 4.5e-76 288.5 204 75.5
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.9e-75 285.8 205 74.6
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 7.2e-74 281.2 203 75.9
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 2.7e-73 279.3 206 73.3
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.6e-73 278.9 204 74.0
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 4.6e-73 278.5 204 71.6
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 6.1e-73 278.1 209 73.2
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 6.1e-73 278.1 198 73.2
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 7.9e-73 277.7 204 72.1
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 3.0e-72 275.8 206 71.4
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.1e-71 273.9 205 73.7
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.1e-71 273.9 206 68.0
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.5e-71 273.5 212 69.8
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.5e-71 273.5 199 73.4
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.0e-71 273.1 197 76.1
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 5.7e-71 271.6 204 75.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.7e-70 270.0 196 75.5
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.7e-70 270.0 205 67.3
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 2.8e-70 269.2 207 72.5
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.8e-70 269.2 205 67.3
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 3.7e-70 268.9 212 69.3
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 3.7e-70 268.9 203 73.9
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 6.3e-70 268.1 206 70.4
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.1e-69 267.3 221 69.2
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.4e-69 266.9 211 71.1
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 6.9e-69 264.6 210 67.6
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 6.9e-69 264.6 197 74.1
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.2e-68 263.8 205 69.8
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.2e-68 263.8 205 70.2
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 2.6e-68 262.7 206 68.4
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 4.5e-68 261.9 195 72.8
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 5.9e-68 261.5 206 67.0
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 7.7e-68 261.2 205 65.9
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 2.2e-67 259.6 215 64.7
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 2.5e-66 256.1 203 67.5
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 9.4e-66 254.2 186 74.2
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 3.6e-65 252.3 148 89.2
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 4.7e-65 251.9 205 68.3
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.0e-64 250.8 208 67.3
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 3.9e-64 248.8 211 69.2
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 8.8e-64 247.7 197 68.0
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 8.8e-64 247.7 198 68.2
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.4e-63 245.4 211 61.6
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 2.2e-62 243.0 195 67.7
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 2.2e-62 243.0 195 67.7
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 2.8e-62 242.7 207 61.8
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 2.8e-62 242.7 168 78.0
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 2.8e-62 242.7 227 61.2
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 3.7e-62 242.3 204 66.7
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 3.7e-62 242.3 205 65.9
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 8.2e-62 241.1 204 66.2
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 8.2e-62 241.1 207 66.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 1.4e-61 240.4 210 67.1
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 2.4e-61 239.6 205 65.9
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 3.1e-61 239.2 204 58.8
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.5e-60 236.9 165 78.2
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 7.7e-60 234.6 218 60.1
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 7.7e-60 234.6 208 60.6
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.0e-59 234.2 241 59.3
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.8e-59 232.3 204 62.7
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.5e-58 230.3 193 66.8
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.5e-58 229.6 209 62.7
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.2e-57 227.3 149 81.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 2.1e-57 226.5 218 54.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 2.7e-57 226.1 147 81.6
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.0e-56 224.2 151 78.1
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.8e-56 223.4 148 79.7
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 8.8e-56 221.1 196 64.3
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.3e-54 217.2 155 76.1
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 1.7e-54 216.9 221 58.4
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 2.9e-51 206.1 132 84.1
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 6.5e-51 204.9 129 86.0
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.5e-50 203.8 147 76.9
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 3.6e-49 199.1 133 82.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 8.8e-48 194.5 153 66.7
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 9.8e-47 191.0 129 73.6
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.4e-45 187.2 166 63.9
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.4e-45 186.4 149 71.8
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.8e-37 160.2 121 72.7
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.9e-34 150.2 152 56.6
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.9e-27 126.3 74 93.2
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 1.9e-26 123.6 200 40.0
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.8e-25 119.8 67 85.1
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 3.7e-14 82.8 153 32.7
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 4.9e-14 82.4 172 34.9
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 9.5e-10 68.2 76 46.1
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.6e-09 67.4 41 82.9


User provided reference genes

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