Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24744 Davidia involucrata HOM05D000815 ORTHO05D000636 3.2e-61 238.4 136 100.0
Dinv01036 Davidia involucrata HOM05D000815 ORTHO05D000636 1.9e-45 186.0 137 78.1
Dinv10600 Davidia involucrata HOM05D000815 ORTHO05D000636 1.2e-23 113.6 98 67.3
Actinidia00668 Actinidia chinensis HOM05D000815 ORTHO05D000636 1.7e-17 93.2 80 72.5
Dinv21754 Davidia involucrata HOM05D000815 ORTHO05D000636 1.1e-16 90.5 47 95.7
Hma1.2p1_0292F.1_g115490 Hydrangea macrophylla HOM05D000815 ORTHO05D000636 1.1e-16 90.5 80 67.5
DCAR_011831 Daucus carota HOM05D000815 ORTHO05D000636 1.3e-14 83.6 46 91.3
Rhsim09G0179000 Rhododendron simsii HOM05D000815 ORTHO05D000636 1.9e-13 79.7 80 58.8
CSS0007740 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 2.5e-13 79.3 82 70.7
Solyc06g051120.4 Solanum lycopersicum HOM05D000815 ORTHO05D000636 3.2e-13 79.0 99 52.5
Sopen06g016930 Solanum pennellii HOM05D000815 ORTHO05D000636 3.2e-13 79.0 99 52.5
PGSC0003DMG400030023 Solanum tuberosum HOM05D000815 ORTHO05D000636 3.2e-13 79.0 99 52.5
Nitab4.5_0000058g0280 Nicotiana tabacum HOM05D000815 ORTHO05D000636 9.4e-13 77.4 101 53.5
TAR623G1576 Trochodendron aralioides HOM05D000815 ORTHO05D000636 1.2e-12 77.0 117 46.2
QL08p063514 Quercus lobata HOM05D000815 ORTHO05D000636 6.1e-12 74.7 48 81.2
CANSAT56G1533 Cannabis sativa HOM05D000815 ORTHO05D000636 7.9e-12 74.3 48 79.2
Nitab4.5_0001369g0050 Nicotiana tabacum HOM05D000815 ORTHO05D000636 7.9e-12 74.3 121 45.5
TAR369G0236 Trochodendron aralioides HOM05D000815 ORTHO05D000636 1.4e-11 73.6 89 52.8
Haze_17253 Corylus avellana HOM05D000815 ORTHO05D000636 3.9e-11 72.0 48 77.1
vmacro10027 Vaccinium macrocarpon HOM05D000815 ORTHO05D000636 5.1e-11 71.6 67 70.1
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 5.1e-11 71.6 106 46.2
Nn2g10942 Nelumbo nucifera HOM05D000815 ORTHO05D000636 6.7e-11 71.2 89 51.7
CiPaw.02G194300 Carya illinoinensis HOM05D000815 ORTHO05D000636 2.6e-10 69.3 48 72.9
Sabra08G0052600 Salix brachista HOM05D000815 ORTHO05D000636 2.6e-10 69.3 46 76.1
Manes.07G132100 Manihot esculenta HOM05D000815 ORTHO05D000636 3.3e-10 68.9 48 70.8
GSVIVG01030322001 Vitis vinifera HOM05D000815 ORTHO05D000636 1.3e-09 67.0 47 70.2
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 1.7e-09 66.6 49 73.5
Lsat_1_v5_gn_9_61041 Lactuca sativa HOM05D000815 ORTHO05D000636 2.8e-09 65.9 44 75.0
Duzib106G1636 Durio zibethinus HOM05D000815 ORTHO05D000636 3.7e-09 65.5 48 70.8
Potri.008G071300 Populus trichocarpa HOM05D000815 ORTHO05D000636 3.7e-09 65.5 85 47.1
Thecc.10G013000 Theobroma cacao HOM05D000815 ORTHO05D000636 3.7e-09 65.5 48 70.8
Cpa.g.sc19.152 Carica papaya HOM05D000815 ORTHO05D000636 4.8e-09 65.1 74 54.1
Lj1P959T29 Lonicera japonica HOM05D000815 ORTHO05D000636 4.8e-09 65.1 47 70.2
TWI53G0673 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 1.4e-08 63.5 48 66.7
AT5G05550 Arabidopsis thaliana HOM05D000815 ORTHO05D000636 1.8e-08 63.2 99 47.5
Aa31LG11G6610 Aethionema arabicum HOM05D000815 ORTHO05D000636 2.4e-08 62.8 49 67.3
PSO339G2884 Papaver somniferum HOM05D000815 ORTHO05D000636 7.0e-08 61.2 111 42.3
AL6G15440 Arabidopsis lyrata HOM05D000815 ORTHO05D000636 3.4e-07 58.9 49 63.3
PSO801G0393 Papaver somniferum HOM05D000815 ORTHO05D000636 3.4e-07 58.9 111 38.7
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 3.4e-07 58.9 78 50.0
Potri.010G186200 Populus trichocarpa HOM05D000815 ORTHO05D000636 4.5e-07 58.5 46 65.2
Aa31LG3G4250 Aethionema arabicum HOM05D000815 ORTHO05D000636 5.9e-07 58.2 49 63.3
AT3G11100 Arabidopsis thaliana HOM05D000815 ORTHO05D000636 5.9e-07 58.2 49 63.3
C09p71230 Brassica napus HOM05D000815 ORTHO05D000636 5.9e-07 58.2 49 63.3
CARHR085680 Cardamine hirsuta HOM05D000815 ORTHO05D000636 5.9e-07 58.2 49 63.3
THA.LOC104816538 Tarenaya hassleriana HOM05D000815 ORTHO05D000636 5.9e-07 58.2 49 63.3
Thhalv10021383m.g Eutrema salsugineum HOM05D000815 ORTHO05D000636 7.7e-07 57.8 49 63.3
AL3G22640 Arabidopsis lyrata HOM05D000815 ORTHO05D000636 1.0e-06 57.4 49 63.3
Carub.0003s1039 Capsella rubella HOM05D000815 ORTHO05D000636 1.0e-06 57.4 49 63.3
BolC9t59884H Brassica oleracea HOM05D000815 ORTHO05D000636 1.3e-06 57.0 49 61.2
CDE04G2189 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 1.7e-06 56.6 89 46.1
Sp6g37320 Schrenkiella parvula HOM05D000815 ORTHO05D000636 2.2e-06 56.2 49 61.2
Carub.0006s0445 Capsella rubella HOM05D000815 ORTHO05D000636 3.8e-06 55.5 49 57.1
CARHR153390 Cardamine hirsuta HOM05D014987 ORTHO05D019987 5.0e-06 55.1 49 61.2
Sp3g09420 Schrenkiella parvula HOM05D000815 ORTHO05D000636 6.5e-06 54.7 102 44.1
Hund13882 Selenicereus undatus HOM05D000815 ORTHO05D000636 6.5e-06 54.7 91 45.1


User provided reference genes

Program Settings