Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 5.0e-52 207.6 114 100.0
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 6.0e-45 184.1 103 100.0
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 2.1e-37 159.1 113 77.9
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 8.1e-34 147.1 113 62.8
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.3e-31 139.8 103 67.0
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 1.3e-31 139.8 103 75.7
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 4.9e-31 137.9 103 68.9
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 6.4e-31 137.5 114 68.4
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 6.4e-31 137.5 114 68.4
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.1e-30 136.7 103 67.0
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.9e-30 136.0 113 62.8
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 3.2e-30 135.2 101 75.2
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 3.2e-30 135.2 101 75.2
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.1e-30 134.8 104 67.3
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.7e-29 132.1 114 67.5
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 3.5e-29 131.7 103 60.2
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 3.5e-29 131.7 103 62.1
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 3.5e-29 131.7 104 71.2
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 3.0e-28 128.6 113 55.8
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 3.0e-28 128.6 103 66.0
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 3.0e-28 128.6 104 62.5
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 3.9e-28 128.3 114 53.5
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 5.1e-28 127.9 103 65.0
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 6.6e-28 127.5 111 67.6
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 6.6e-28 127.5 103 65.0
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 8.6e-28 127.1 103 69.9
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 8.6e-28 127.1 105 64.8
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 8.6e-28 127.1 105 72.4
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 8.6e-28 127.1 105 60.0
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.5e-27 126.3 105 61.9
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.5e-27 126.3 103 63.1
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 2.5e-27 125.6 103 68.0
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 3.3e-27 125.2 104 69.2
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 3.3e-27 125.2 103 65.0
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 3.3e-27 125.2 111 60.4
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 7.3e-27 124.0 113 54.9
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 7.3e-27 124.0 103 64.1
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 9.6e-27 123.6 105 59.0
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.2e-26 123.2 103 70.9
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 3.6e-26 121.7 111 57.7
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 3.6e-26 121.7 114 64.0
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 4.7e-26 121.3 104 68.3
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 6.2e-26 120.9 106 58.5
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 8.1e-26 120.6 113 62.8
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.4e-25 119.8 103 64.1
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 1.8e-25 119.4 110 57.3
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.4e-25 119.0 116 50.9
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.4e-25 119.0 116 50.9
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.4e-25 119.0 116 50.9
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 2.4e-25 119.0 104 58.7
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 2.4e-25 119.0 104 65.4
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 3.1e-25 118.6 103 62.1
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.0e-25 118.2 116 52.6
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.0e-25 118.2 103 64.1
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 6.9e-25 117.5 105 56.2
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 8.9e-25 117.1 108 63.0
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.2e-24 116.7 105 61.9
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.5e-24 116.3 105 52.4
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 1.5e-24 116.3 105 65.7
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.5e-24 116.3 105 58.1
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.5e-24 116.3 105 60.0
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.5e-24 116.3 106 67.0
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 2.0e-24 115.9 103 60.2
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.6e-24 115.5 104 67.3
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 2.6e-24 115.5 106 62.3
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 2.6e-24 115.5 104 64.4
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.6e-24 115.5 106 59.4
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 3.4e-24 115.2 105 59.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 4.4e-24 114.8 105 61.0
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 5.8e-24 114.4 106 64.2
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.3e-23 113.2 102 67.6
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.7e-23 112.8 104 66.3
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 2.9e-23 112.1 106 61.3
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 6.4e-23 110.9 105 56.2
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 6.4e-23 110.9 106 62.3
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 1.1e-22 110.2 105 51.4
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 1.4e-22 109.8 103 63.1
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 3.2e-22 108.6 106 66.0
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 3.2e-22 108.6 105 62.9
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 1.6e-21 106.3 103 62.1
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.1e-21 105.9 103 60.2
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.6e-21 104.8 113 54.9
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.6e-21 104.8 113 54.9
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 6.0e-21 104.4 102 59.8
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 6.0e-21 104.4 102 59.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.3e-20 103.2 111 58.6
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 6.6e-20 100.9 103 63.1
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.1e-19 100.1 105 63.8
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.1e-19 100.1 103 66.0
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 1.1e-19 100.1 103 63.1
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 1.9e-19 99.4 112 56.2
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 9.6e-19 97.1 106 58.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 1.3e-18 96.7 103 65.0
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 8.1e-18 94.0 103 58.3
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.8e-17 92.8 103 45.6
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.8e-17 92.8 103 45.6
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.2e-16 90.1 103 46.6
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 5.8e-16 87.8 110 55.5
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 4.6e-13 78.2 62 58.1
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 4.6e-13 78.2 94 53.2
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.5e-11 73.2 148 30.4
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 3.3e-11 72.0 41 65.9
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 9.6e-11 70.5 104 47.1
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 2.6e-08 62.4 48 52.1
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 9.9e-08 60.5 38 63.2
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 5.5e-06 54.7 28 75.0


User provided reference genes

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