Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 6.1e-82 307.4 149 100.0
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 2.2e-55 219.2 118 85.6
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.3e-51 204.9 108 86.1
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 7.3e-51 204.1 114 80.7
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.6e-50 203.0 121 78.5
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 4.7e-50 201.4 109 82.6
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 4.0e-49 198.4 118 77.1
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 8.9e-49 197.2 120 77.5
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 1.2e-48 196.8 121 76.9
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 2.0e-48 196.1 110 82.7
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 3.4e-48 195.3 121 75.2
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 3.4e-48 195.3 121 75.2
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 3.4e-48 195.3 111 79.3
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 4.4e-48 194.9 117 76.1
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 7.5e-48 194.1 117 75.2
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 9.8e-48 193.7 121 74.4
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 9.8e-48 193.7 124 74.2
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 1.3e-47 193.4 123 75.6
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.3e-47 193.4 123 75.6
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.3e-47 193.4 123 75.6
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 1.3e-47 193.4 117 78.6
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 1.7e-47 193.0 114 77.2
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 2.2e-47 192.6 121 75.2
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 2.2e-47 192.6 112 79.5
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 3.7e-47 191.8 124 74.2
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 4.9e-47 191.4 120 73.3
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 6.4e-47 191.0 121 76.0
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 6.4e-47 191.0 118 74.6
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 8.3e-47 190.7 109 77.1
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.1e-46 190.3 108 78.7
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.1e-46 190.3 117 78.6
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 1.4e-46 189.9 153 63.4
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.4e-46 189.1 121 71.1
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.4e-46 189.1 119 75.6
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 3.2e-46 188.7 119 74.8
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.2e-46 188.7 119 74.8
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 3.2e-46 188.7 123 73.2
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 4.1e-46 188.3 121 73.6
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 5.4e-46 188.0 120 73.3
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 5.4e-46 188.0 121 73.6
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 7.0e-46 187.6 117 74.4
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 7.0e-46 187.6 118 75.4
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 9.2e-46 187.2 129 69.0
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 9.2e-46 187.2 122 73.0
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.2e-45 186.8 113 75.2
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.0e-45 186.0 121 68.6
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 2.7e-45 185.7 126 69.8
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 2.7e-45 185.7 126 69.8
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 2.7e-45 185.7 118 71.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 2.7e-45 185.7 108 75.9
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 2.7e-45 185.7 120 72.5
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 4.6e-45 184.9 110 72.7
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 6.0e-45 184.5 121 70.2
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 7.8e-45 184.1 126 69.8
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 7.8e-45 184.1 110 75.5
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 1.3e-44 183.3 119 73.1
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.3e-44 183.3 126 67.5
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.3e-44 183.3 126 69.0
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.3e-44 183.3 115 73.9
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 1.7e-44 183.0 126 69.0
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.7e-44 183.0 110 75.5
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.7e-44 183.0 121 67.8
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.7e-44 183.0 113 75.2
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 1.7e-44 183.0 122 70.5
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 5.0e-44 181.4 110 75.5
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 5.0e-44 181.4 122 69.7
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 5.0e-44 181.4 108 75.0
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 6.6e-44 181.0 111 74.8
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 6.6e-44 181.0 117 70.9
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 8.6e-44 180.6 110 72.7
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 8.6e-44 180.6 125 70.4
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 8.6e-44 180.6 119 69.7
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 8.6e-44 180.6 125 69.6
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 1.1e-43 180.3 110 74.5
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.1e-43 180.3 125 68.0
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.1e-43 180.3 110 74.5
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 3.3e-43 178.7 119 73.9
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 3.3e-43 178.7 125 68.8
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 5.6e-43 177.9 121 71.1
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 5.6e-43 177.9 113 75.2
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 9.5e-43 177.2 108 72.2
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 1.6e-42 176.4 109 76.1
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 2.1e-42 176.0 124 69.4
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 2.1e-42 176.0 118 71.2
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.8e-42 175.6 113 75.2
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 2.8e-42 175.6 118 70.3
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 3.6e-42 175.3 142 60.6
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 4.7e-42 174.9 106 74.5
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 2.3e-41 172.6 118 67.8
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 6.8e-41 171.0 123 65.9
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.2e-40 170.2 108 67.6
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 2.0e-40 169.5 121 68.6
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 2.0e-40 169.5 167 54.5
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 2.6e-40 169.1 110 73.6
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 3.7e-39 165.2 123 65.9
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 1.9e-38 162.9 106 68.9
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 1.2e-37 160.2 152 56.6
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.6e-37 159.8 102 71.6
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.6e-37 159.8 102 72.5
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.0e-36 157.1 159 51.6
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 4.7e-34 148.3 114 59.6
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.1e-33 147.1 111 60.4
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 5.8e-32 141.4 119 52.9
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 1.7e-28 129.8 103 56.3
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 3.9e-28 128.6 119 47.1
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 9.9e-24 114.0 108 49.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 8.4e-23 110.9 79 65.8
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 7.1e-22 107.8 94 53.2
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.7e-20 103.2 88 58.0
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 4.3e-19 98.6 58 72.4
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.6e-18 95.5 60 65.0
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 1.8e-17 93.2 61 70.5
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 6.9e-17 91.3 49 81.6
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 4.5e-16 88.6 98 43.9
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 9.9e-16 87.4 49 81.6
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 6.0e-13 78.2 49 71.4
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 2.3e-12 76.3 47 68.1
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 8.7e-12 74.3 47 70.2
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 1.1e-11 73.9 46 71.7
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 2.5e-11 72.8 46 67.4
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 7.4e-11 71.2 44 70.5


User provided reference genes

Program Settings