Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23715 Davidia involucrata HOM05D004263 ORTHO05D004931 4.3e-192 674.5 337 100.0
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 9.9e-181 636.7 336 92.6
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 2.2e-180 635.6 336 93.5
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 1.2e-178 629.8 336 91.1
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 2.1e-178 629.0 336 92.3
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 2.1e-178 629.0 336 90.8
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 1.8e-177 625.9 336 91.7
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 2.3e-177 625.5 336 90.8
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 3.9e-177 624.8 336 90.8
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 6.7e-177 624.0 336 90.2
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 4.3e-176 621.3 336 89.6
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 2.8e-175 618.6 336 88.1
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 8.1e-175 617.1 336 89.6
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 8.1e-175 617.1 336 89.0
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 8.1e-175 617.1 336 90.5
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.8e-174 615.9 336 89.3
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 2.4e-174 615.5 336 89.0
QL08p037237 Quercus lobata HOM05D004263 ORTHO05D004931 3.4e-173 611.7 336 88.7
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 3.4e-173 611.7 336 88.7
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.5e-173 611.3 336 88.7
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 4.5e-173 611.3 336 88.4
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 4.5e-173 611.3 336 88.4
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 7.6e-173 610.5 336 87.8
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 1.3e-172 609.8 336 87.8
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 3.8e-172 608.2 336 86.9
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 1.9e-171 605.9 381 79.8
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 2.5e-171 605.5 336 87.2
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 2.5e-171 605.5 336 87.2
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 9.3e-171 603.6 336 85.4
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 6.0e-170 600.9 337 86.4
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 7.9e-170 600.5 336 85.1
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 7.9e-170 600.5 336 86.6
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 1.3e-169 599.7 336 85.1
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 1.3e-169 599.7 336 85.1
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.8e-169 599.4 336 87.5
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 1.9e-168 595.9 336 84.8
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 4.3e-168 594.7 345 84.9
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 7.4e-168 594.0 336 85.7
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 1.6e-167 592.8 336 84.5
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 3.7e-167 591.7 336 84.2
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 1.1e-166 590.1 336 84.8
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 1.4e-166 589.7 336 84.8
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 5.3e-166 587.8 345 83.5
VMungo1080G0385 Vigna mungo HOM05D004263 ORTHO05D004931 5.3e-166 587.8 336 83.3
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 1.2e-165 586.6 336 83.6
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 2.6e-165 585.5 336 84.5
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 4.5e-165 584.7 336 83.0
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 5.8e-165 584.3 336 83.9
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 7.6e-165 583.9 360 80.3
Nitab4.5_0001514g0010 Nicotiana tabacum HOM05D004263 ORTHO05D004931 7.6e-165 583.9 336 84.8
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 7.6e-165 583.9 343 84.0
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 1.0e-164 583.6 336 84.5
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 3.8e-164 581.6 337 84.6
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 5.0e-164 581.3 336 83.9
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 5.0e-164 581.3 336 83.0
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 8.4e-164 580.5 336 83.9
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 8.4e-164 580.5 336 83.3
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 8.4e-164 580.5 336 83.9
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 1.1e-163 580.1 336 82.7
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.1e-163 580.1 360 79.4
TPR.G26159 Trifolium pratense HOM05D004263 ORTHO05D004931 1.4e-163 579.7 336 84.2
Nitab4.5_0000025g0490 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.9e-163 579.3 336 84.2
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 2.5e-163 578.9 336 83.0
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 5.5e-163 577.8 338 83.1
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 7.1e-163 577.4 337 83.7
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 3.5e-162 575.1 336 82.7
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 4.6e-162 574.7 336 83.3
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 7.9e-162 573.9 336 84.2
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 7.9e-162 573.9 336 82.1
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.0e-161 573.5 360 78.3
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 1.0e-161 573.5 342 83.9
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 1.3e-161 573.2 336 82.4
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 1.8e-161 572.8 338 82.5
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 1.8e-161 572.8 336 84.5
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 2.3e-161 572.4 336 82.4
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 2.3e-161 572.4 360 78.6
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 3.0e-161 572.0 343 82.5
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 3.0e-161 572.0 338 82.2
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 3.0e-161 572.0 336 82.7
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 2.5e-160 568.9 336 81.8
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 3.3e-160 568.5 336 83.0
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 2.8e-159 565.5 348 79.6
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 6.3e-159 564.3 308 89.0
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 4.1e-158 561.6 351 78.3
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 2.6e-157 558.9 336 81.5
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 3.8e-156 555.1 351 78.6
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 4.2e-155 551.6 336 79.2
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 5.5e-155 551.2 343 78.4
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 5.5e-155 551.2 336 81.8
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 1.8e-153 546.2 308 85.1
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 3.9e-153 545.0 353 76.8
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 4.8e-151 538.1 336 76.5
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 6.3e-151 537.7 336 79.5
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 1.4e-150 536.6 338 80.2
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 3.4e-149 531.9 352 75.9
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 8.5e-148 527.3 309 84.8
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 3.6e-146 521.9 336 77.7
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 2.2e-143 512.7 336 75.0
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 1.7e-140 503.1 336 72.0
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 1.9e-139 499.6 336 71.7
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 3.6e-138 495.4 349 71.9
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 1.4e-137 493.4 338 74.0
SHI10474 Sapria himalayana HOM05D004263 ORTHO05D004931 4.0e-137 491.9 336 70.8
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 1.9e-131 473.0 315 73.3
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 4.1e-110 402.1 337 56.1
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 7.3e-107 391.3 339 56.9
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 1.6e-106 390.2 336 56.2
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.7e-100 370.2 342 60.8
MSTRG.11471 Avicennia marina HOM05D004263 ORTHO05D004931 8.6e-100 367.9 204 82.8
CAN.G2148.1 Capsicum annuum HOM05D004263 ORTHO05D004931 1.1e-97 360.9 205 82.4
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 4.4e-96 355.5 190 93.2
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 5.1e-92 342.0 341 48.4
Lj1C736T2 Lonicera japonica HOM05D004263 ORTHO05D004931 6.8e-89 331.6 178 89.3
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.3e-87 327.4 190 86.3
PGSC0003DMG400025399 Solanum tuberosum HOM05D004263 ORTHO05D004931 3.7e-87 325.9 178 87.1
CAN.G224.18 Capsicum annuum HOM05D004263 ORTHO05D004931 1.9e-83 313.5 205 74.6
BcaC05g25136 Brassica carinata HOM05D004263 ORTHO05D004931 2.1e-82 310.1 181 80.7
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 1.5e-72 277.3 160 84.4
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 4.9e-71 272.3 145 92.4
Oeu001692.1 Olea europaea HOM05D004263 ORTHO05D004931 3.4e-64 249.6 153 79.7
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 2.3e-60 236.9 135 88.1
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 3.0e-60 236.5 136 86.0
Cpa.g.sc34.89 Carica papaya HOM05D004263 ORTHO05D004931 2.1e-58 230.3 127 85.8
CBR_g40703 Chara braunii HOM05D004263 ORTHO05D004931 3.4e-48 196.4 313 37.7
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 1.6e-45 187.6 139 69.1
Medtr8g471030 Medicago truncatula HOM05D004263 ORTHO05D004931 3.5e-45 186.4 101 83.2
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 1.6e-42 177.6 103 86.4
PRCOL_00001544 Prasinoderma coloniale HOM05D004263 ORTHO05D004931 1.4e-20 104.8 337 26.1
Cfa022578 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.2e-16 91.7 358 26.5
CAN.G2148.2 Capsicum annuum HOM05D004263 ORTHO05D004931 1.6e-16 91.3 54 83.3
CSS0002414 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.7e-13 80.5 84 57.1
Manes.13G151750 Manihot esculenta HOM05D004263 ORTHO05D004931 4.4e-11 73.2 44 81.8
TPR.G27092 Trifolium pratense HOM05D004263 ORTHO05D004931 2.4e-09 67.4 50 66.0
arahy.Tifrunner.gnm1.ann1.J1BTWL Arachis hypogaea HOM05D004263 ORTHO05D004931 1.6e-08 64.7 31 90.3
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 1.1e-06 58.5 45 64.4


User provided reference genes

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