Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 5.4e-161 570.9 272 100.0
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 3.9e-143 511.5 262 91.6
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 6.6e-143 510.8 262 91.6
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 1.9e-142 509.2 262 91.6
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 3.3e-142 508.4 262 91.2
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.3e-142 508.1 264 91.7
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 4.3e-142 508.1 262 90.1
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 1.3e-141 506.5 262 90.1
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 4.8e-141 504.6 262 89.3
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 4.8e-141 504.6 262 90.8
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 8.1e-141 503.8 262 91.6
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 8.1e-141 503.8 262 89.3
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 1.4e-140 503.1 260 91.9
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 3.1e-140 501.9 262 87.4
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 3.1e-140 501.9 262 90.5
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 4.0e-140 501.5 262 88.5
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 6.9e-140 500.7 262 87.4
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 6.9e-140 500.7 263 89.4
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.2e-139 500.0 263 88.2
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 4.4e-139 498.0 262 87.4
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 4.4e-139 498.0 260 88.8
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 5.8e-139 497.7 262 87.8
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 9.9e-139 496.9 262 87.8
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 1.3e-138 496.5 262 88.5
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 2.9e-138 495.4 262 86.6
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 4.9e-138 494.6 260 88.1
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 6.4e-138 494.2 262 87.0
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 6.4e-138 494.2 262 87.0
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 8.4e-138 493.8 262 87.4
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 8.4e-138 493.8 262 86.6
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 1.9e-137 492.7 260 87.7
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 2.4e-137 492.3 262 87.8
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 3.2e-137 491.9 257 87.9
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 3.2e-137 491.9 259 88.8
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 4.2e-137 491.5 260 87.3
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 5.4e-137 491.1 259 88.0
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 7.1e-137 490.7 284 83.8
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.2e-136 490.0 262 85.9
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.2e-136 490.0 257 87.5
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 1.6e-136 489.6 262 87.0
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 2.1e-136 489.2 262 85.9
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 2.1e-136 489.2 262 86.6
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 2.7e-136 488.8 260 86.9
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 4.6e-136 488.0 261 87.4
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 4.6e-136 488.0 262 87.0
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 4.6e-136 488.0 262 87.0
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.7e-135 486.1 262 86.3
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 2.3e-135 485.7 262 85.1
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 5.1e-135 484.6 262 86.6
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 6.6e-135 484.2 262 87.4
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 6.6e-135 484.2 257 87.2
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 6.6e-135 484.2 257 87.2
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 1.1e-134 483.4 262 86.3
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 1.5e-134 483.0 262 84.7
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 1.9e-134 482.6 262 84.4
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 2.5e-134 482.3 257 86.4
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 3.3e-134 481.9 262 83.6
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 3.3e-134 481.9 262 84.4
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 4.3e-134 481.5 262 84.4
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 5.6e-134 481.1 262 87.4
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 5.6e-134 481.1 262 87.4
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 5.6e-134 481.1 262 83.6
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 5.6e-134 481.1 262 86.3
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 7.3e-134 480.7 257 86.8
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 2.1e-133 479.2 262 84.0
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 2.8e-133 478.8 263 83.7
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 3.6e-133 478.4 262 84.0
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 4.8e-133 478.0 260 84.6
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 6.2e-133 477.6 260 86.2
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 2.4e-132 475.7 260 83.8
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 9.0e-132 473.8 260 84.2
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 1.2e-131 473.4 262 85.5
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 1.5e-131 473.0 257 84.0
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 3.4e-131 471.9 262 83.6
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 4.5e-131 471.5 262 84.7
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.2e-130 469.2 262 83.6
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 3.8e-130 468.4 262 82.8
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.1e-129 466.8 262 82.4
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.1e-129 466.8 262 82.4
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.1e-129 466.8 262 82.4
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 2.7e-128 462.2 281 78.3
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.0e-127 460.3 292 76.7
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 5.1e-127 458.0 262 80.5
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 1.5e-126 456.4 257 80.2
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 1.6e-125 453.0 256 81.6
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 2.1e-125 452.6 257 79.8
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 3.1e-124 448.7 271 78.6
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 1.3e-122 443.4 240 85.8
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.1e-121 440.3 260 79.2
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 3.2e-121 438.7 260 79.2
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 4.2e-121 438.3 262 78.6
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 9.3e-121 437.2 220 91.4
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 2.1e-120 436.0 262 80.5
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 2.7e-120 435.6 262 77.9
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.0e-119 432.2 258 79.1
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 2.1e-117 426.0 265 76.6
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.1e-116 422.2 259 77.6
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 1.3e-111 406.8 260 74.6
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.3e-110 402.1 259 74.1
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 2.8e-109 399.1 262 72.9
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 6.9e-108 394.4 353 60.6
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 2.6e-107 392.5 220 80.5
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 5.9e-107 391.3 276 68.8
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 8.5e-106 387.5 276 68.5
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.8e-103 379.8 257 68.9
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 8.8e-103 377.5 257 68.1
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 4.1e-100 368.6 259 67.2
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.6e-96 356.7 265 64.2
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.7e-96 355.9 276 65.9
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 5.0e-90 335.1 199 78.9
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 1.2e-88 330.5 267 60.7
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 4.7e-88 328.6 193 77.7
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 6.1e-88 328.2 252 69.0
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 8.0e-88 327.8 274 59.5
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 9.1e-84 314.3 345 48.7
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.5e-70 270.4 262 54.6
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 5.7e-70 268.5 153 81.0
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 1.0e-66 257.7 202 63.9
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 5.4e-60 235.3 118 94.1
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 1.1e-52 211.1 108 92.6
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 1.7e-50 203.8 153 67.3
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.7e-43 179.9 255 38.0
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.1e-42 175.6 113 71.7
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 4.3e-41 172.6 255 37.3
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.4e-39 167.5 95 84.2
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 1.3e-37 161.0 283 37.1
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 1.7e-37 160.6 255 35.3
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 4.6e-35 152.5 181 50.8
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.7e-34 150.6 89 77.5
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 5.1e-34 149.1 81 84.0
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 6.6e-34 148.7 257 36.2
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 3.3e-33 146.4 74 82.4
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 1.1e-31 141.4 256 34.8
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 9.3e-28 128.3 117 59.8
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 5.1e-26 122.5 256 36.3
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 1.1e-25 121.3 113 59.3
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 7.9e-19 98.6 49 87.8
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 1.2e-14 84.7 152 34.2
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 1.2e-14 84.7 47 76.6
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 1.2e-14 84.7 47 76.6
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 5.8e-14 82.4 42 92.9
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 2.2e-13 80.5 108 47.2
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 1.5e-09 67.8 146 30.8
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 9.6e-09 65.1 38 84.2
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 1.6e-08 64.3 29 93.1


User provided reference genes

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