Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21857 Davidia involucrata HOM05D004933 ORTHO05D005465 1.7e-70 269.2 135 100.0
Hma1.2p1_0264F.1_g105950 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.8e-19 99.8 65 76.9
Hma1.2p1_1805F.1_g303150 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.8e-19 99.8 65 76.9
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 2.1e-17 92.8 63 71.4
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 1.3e-14 83.6 83 55.4
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 1.7e-14 83.2 63 65.1
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 4.6e-12 75.1 63 54.0
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.0e-11 73.9 85 48.2
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 2.3e-11 72.8 78 48.7
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 3.9e-11 72.0 65 56.9
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 4.3e-10 68.6 63 54.0
Nitab4.5_0006356g0020 Nicotiana tabacum HOM05D004933 ORTHO05D005465 5.6e-10 68.2 63 54.0
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 9.6e-10 67.4 82 45.1
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 2.8e-09 65.9 86 44.2
Nitab4.5_0000171g0280 Nicotiana tabacum HOM05D004933 ORTHO05D005465 3.7e-09 65.5 63 52.4
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 4.8e-09 65.1 63 50.8
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 1.8e-08 63.2 79 48.1
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 2.4e-08 62.8 63 49.2
Sopen03g025600 Solanum pennellii HOM05D004933 ORTHO05D005465 3.1e-08 62.4 63 49.2
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 5.3e-08 61.6 66 50.0
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 5.3e-08 61.6 66 53.0
QL08p065080 Quercus lobata HOM05D004933 ORTHO05D005465 6.9e-08 61.2 66 48.5
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 1.2e-07 60.5 66 51.5
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 1.2e-07 60.5 85 44.7
FAN03G3286 Fragaria x ananassa HOM05D004933 ORTHO05D005465 2.0e-07 59.7 71 47.9
Sopen10g016820 Solanum pennellii HOM05D004933 ORTHO05D005465 3.4e-07 58.9 63 47.6
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 4.5e-07 58.5 67 49.3
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 5.8e-07 58.2 85 41.2
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 5.8e-07 58.2 85 41.2
Solyc07g064540.3 Solanum lycopersicum HOM05D004933 ORTHO05D005465 5.8e-07 58.2 61 47.5
Solyc12g043070.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 5.8e-07 58.2 63 46.0
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.7e-06 56.6 70 48.6
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 2.2e-06 56.2 67 47.8
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 2.9e-06 55.8 69 46.4
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 6.5e-06 54.7 67 47.8
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 8.4e-06 54.3 66 50.0
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 8.4e-06 54.3 66 50.0


User provided reference genes

Program Settings