Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 2.1e-252 875.2 428 100.0
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 1.4e-171 606.7 424 69.8
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 1.5e-144 516.9 447 58.2
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 2.6e-141 506.1 427 59.3
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 6.3e-140 501.5 431 58.5
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 1.7e-137 493.4 426 59.4
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 2.1e-135 486.5 426 57.5
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.8e-131 473.4 406 60.1
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 1.0e-129 467.6 408 58.8
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 4.3e-128 462.2 414 57.2
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 5.2e-126 455.3 407 57.0
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 8.9e-126 454.5 407 57.0
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 1.7e-124 450.3 414 55.8
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 4.6e-122 442.2 415 55.2
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 7.8e-122 441.4 406 54.2
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 7.3e-120 434.9 423 50.6
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 3.4e-117 426.0 429 52.7
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 3.4e-117 426.0 406 54.7
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 7.5e-117 424.9 427 51.1
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 4.1e-115 419.1 419 50.6
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 5.6e-112 408.7 404 52.2
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 2.8e-111 406.4 412 50.5
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 8.1e-111 404.8 406 50.7
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 2.0e-109 400.2 479 46.8
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 8.3e-108 394.8 403 51.4
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 2.4e-107 393.3 425 46.8
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 2.4e-107 393.3 411 49.1
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 4.1e-107 392.5 411 49.1
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 1.2e-106 391.0 425 46.6
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 1.3e-105 387.5 425 47.5
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 3.9e-105 386.0 417 47.0
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.5e-104 384.0 411 46.7
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.8e-103 379.8 421 47.3
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 4.7e-103 379.0 410 47.8
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 8.1e-103 378.3 362 52.5
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 8.1e-103 378.3 407 51.1
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 3.1e-102 376.3 398 49.0
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 5.8e-101 372.1 413 46.5
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 1.7e-100 370.5 463 44.1
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 3.5e-98 362.8 444 47.1
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 6.0e-98 362.1 452 45.6
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 1.0e-97 361.3 416 46.9
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 6.2e-95 352.1 421 45.4
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 1.4e-94 350.9 406 47.8
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 1.8e-94 350.5 416 46.4
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 9.9e-93 344.7 350 49.7
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 1.3e-92 344.4 409 44.5
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 3.9e-89 332.8 394 42.9
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 2.5e-88 330.1 337 50.4
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.3e-87 327.8 432 41.9
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 9.0e-86 321.6 362 47.0
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 9.0e-86 321.6 362 47.0
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 9.3e-83 311.6 360 45.3
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 7.9e-82 308.5 282 56.0
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 9.6e-80 301.6 423 39.7
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 4.5e-77 292.7 247 59.5
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 2.9e-76 290.0 432 40.0
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 3.8e-76 289.7 419 38.9
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 6.0e-74 282.3 308 48.7
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 1.1e-72 278.1 202 66.3
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 9.6e-72 275.0 245 55.1
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 6.9e-70 268.9 318 47.2
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 1.2e-69 268.1 406 38.7
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 1.5e-69 267.7 247 53.4
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 1.9e-64 250.8 310 43.2
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 4.8e-63 246.1 182 64.8
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 2.1e-58 230.7 315 41.3
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 1.7e-55 221.1 308 41.9
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 1.1e-51 208.4 248 46.4
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 4.2e-51 206.5 194 54.6
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 2.6e-48 197.2 419 32.5
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 1.1e-46 191.8 245 44.1
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 5.3e-46 189.5 232 43.1
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 1.5e-43 181.4 206 47.6
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 2.8e-39 167.2 263 39.5
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 5.0e-36 156.4 105 67.6
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 1.2e-34 151.8 122 57.4
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 4.7e-34 149.8 281 35.9
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 1.2e-32 145.2 236 38.1
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 5.7e-32 142.9 260 34.6
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.8e-25 121.3 417 26.6
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 4.0e-25 120.2 387 27.1
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 4.1e-22 110.2 302 25.2
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 9.1e-22 109.0 107 52.3
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 4.2e-19 100.1 84 61.9
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 9.5e-19 99.0 98 49.0
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 4.7e-18 96.7 78 59.0
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.2e-15 87.8 131 39.7
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 2.9e-15 87.4 104 44.2
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 1.8e-14 84.7 108 40.7
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 1.8e-14 84.7 148 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 5.9e-13 79.7 209 24.9
Glyma.19G193000 Glycine max HOM05D006439 ORTHO05D046803 5.6e-11 73.2 77 53.2
SEGI_31670 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.6e-10 71.6 114 36.0
Lj1g0014420 Lotus japonicus HOM05D006439 ORTHO05D046803 4.0e-09 67.0 79 49.4
Lj1g0023385 Lotus japonicus HOM05D006439 ORTHO05D008152 2.6e-08 64.3 71 47.9
SEGI_01774 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 4.9e-07 60.1 63 49.2
EL10Ac7g16959 Beta vulgaris HOM05D006439 ORTHO05D008152 1.9e-06 58.2 62 48.4


User provided reference genes

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