Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20745 Davidia involucrata HOM05D001111 ORTHO05D000939 2.1e-88 328.9 160 100.0
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 2.1e-16 89.7 55 80.0
Dinv18850 Davidia involucrata HOM05D001111 ORTHO05D000939 5.3e-15 85.1 71 59.2
Dinv15287 Davidia involucrata HOM05D001111 ORTHO05D000939 4.2e-12 75.5 67 55.2
Rhsim12G0045800 Rhododendron simsii HOM05D001111 ORTHO05D000939 5.7e-09 65.1 56 55.4
Nitab4.5_0000884g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.2e-08 63.2 68 47.1
MSTRG.2399 Avicennia marina HOM05D001111 ORTHO05D000939 2.8e-08 62.8 58 51.7
Oeu003459.1 Olea europaea HOM05D001111 ORTHO05D000939 4.8e-08 62.0 68 47.1
Potri.004G002700 Populus trichocarpa HOM05D000684 ORTHO05D000688 1.4e-07 60.5 84 45.2
HanXRQChr16g0516861 Helianthus annuus HOM05D000684 ORTHO05D000688 2.4e-07 59.7 84 44.0
MSTRG.7903 Avicennia marina HOM05D001111 ORTHO05D000939 3.1e-07 59.3 74 44.6
Sabra04G0001200 Salix brachista HOM05D000684 ORTHO05D000688 3.1e-07 59.3 84 45.2
Migut.E00167 Erythranthe guttata HOM05D001111 ORTHO05D000939 4.1e-07 58.9 55 50.9
SGA_v2.0_scaffold8G04207 Striga asiatica HOM05D001111 ORTHO05D000939 9.0e-07 57.8 56 48.2
CSS0049238 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D000688 1.2e-06 57.4 47 59.6
ClCG08G018030 Citrullus lanatus HOM05D001111 ORTHO05D000939 1.2e-06 57.4 78 41.0
MSTRG.13369 Avicennia marina HOM05D001111 ORTHO05D000939 1.5e-06 57.0 55 50.9
SGA_v2.0_scaffold165G38234 Striga asiatica HOM05D001111 ORTHO05D000939 1.5e-06 57.0 63 44.4
Solyc05g005260.3 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.0e-06 56.6 53 49.1
Sopen05g001270 Solanum pennellii HOM05D001111 ORTHO05D000939 2.0e-06 56.6 53 49.1
PGSC0003DMG400013482 Solanum tuberosum HOM05D001111 ORTHO05D000939 2.0e-06 56.6 53 49.1
CsaV3_3G025060 Cucumis sativus L. HOM05D001111 ORTHO05D000939 4.5e-06 55.5 68 44.1
Lj1A1237T46 Lonicera japonica HOM05D000684 ORTHO05D000688 4.5e-06 55.5 47 59.6
Oeu054059.1 Olea europaea HOM05D001111 ORTHO05D000939 5.9e-06 55.1 56 48.2
Thecc.06G230000 Theobroma cacao HOM05D000684 ORTHO05D000688 7.7e-06 54.7 47 59.6
TAR629G2523 Trochodendron aralioides HOM05D000684 ORTHO05D000688 7.7e-06 54.7 47 57.4
Nitab4.5_0000143g0520 Nicotiana tabacum HOM05D000684 ORTHO05D000688 1.0e-05 54.3 47 55.3


User provided reference genes

Program Settings