Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20510 Davidia involucrata HOM05D002009 ORTHO05D016985 2.5e-118 428.7 208 100.0
Dinv20532 Davidia involucrata HOM05D002009 ORTHO05D016985 2.5e-118 428.7 208 100.0
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 8.0e-88 327.4 174 93.7
Hma1.2p1_1077F.1_g254700 Hydrangea macrophylla HOM05D002009 ORTHO05D006831 7.5e-54 214.5 174 64.4
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 6.4e-53 211.5 176 63.1
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 4.7e-48 195.3 183 55.7
TAR633G0909 Trochodendron aralioides HOM05D002009 ORTHO05D006831 1.4e-44 183.7 203 50.7
CiPaw.07G018700 Carya illinoinensis HOM05D002009 ORTHO05D006831 1.9e-44 183.3 174 58.6
Dinv22756 Davidia involucrata HOM05D062722 ORTHO05D016985 3.2e-44 182.6 104 89.4
Dinv30227 Davidia involucrata HOM05D062722 ORTHO05D016985 3.2e-44 182.6 104 89.4
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 1.7e-42 176.8 176 55.1
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 3.0e-42 176.0 179 56.4
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 1.5e-41 173.7 184 52.7
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 7.3e-41 171.4 186 54.8
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 3.6e-40 169.1 186 54.8
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 2.3e-39 166.4 174 51.7
vmacro04830 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 1.7e-37 160.2 209 46.4
Actinidia23644 Actinidia chinensis HOM05D002009 ORTHO05D006831 2.9e-37 159.5 148 61.5
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 2.3e-34 149.8 174 48.9
Eucgr.B01945 Eucalyptus grandis HOM05D002009 ORTHO05D006831 1.1e-33 147.5 175 49.1
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 1.5e-33 147.1 182 51.1
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 1.5e-33 147.1 174 48.3
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 7.3e-33 144.8 174 46.6
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 6.2e-32 141.7 174 46.0
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 6.2e-32 141.7 178 46.6
Gohir.D08G227001 Gossypium hirsutum HOM05D002009 ORTHO05D006831 1.1e-31 141.0 174 47.1
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 1.1e-31 141.0 174 46.6
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 1.8e-31 140.2 179 46.4
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 2.6e-30 136.3 174 47.7
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 4.4e-30 135.6 174 47.7
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 5.8e-30 135.2 175 45.7
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 5.8e-30 135.2 179 46.4
FAN14G2713 Fragaria x ananassa HOM05D002009 ORTHO05D006831 3.8e-29 132.5 173 44.5
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 8.4e-29 131.3 175 46.9
Sc09g0003130 Simmondsia chinensis HOM05D002009 ORTHO05D006831 1.9e-28 130.2 174 47.7
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 2.4e-28 129.8 173 43.9
FAN02G0878 Fragaria x ananassa HOM05D002009 ORTHO05D006831 3.2e-28 129.4 199 41.2
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 5.4e-28 128.6 173 42.2
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 7.1e-28 128.3 176 43.8
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 2.7e-27 126.3 176 46.0
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 4.6e-27 125.6 199 40.7
Aa31LG2G11690 Aethionema arabicum HOM05D000208 ORTHO05D006831 7.8e-27 124.8 178 41.6
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 1.7e-26 123.6 174 44.3
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 3.0e-26 122.9 178 44.4
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 5.1e-26 122.1 174 44.8
Migut.N02062 Erythranthe guttata HOM05D002009 ORTHO05D006831 1.1e-25 120.9 177 47.5
Migut.N02070 Erythranthe guttata HOM05D002009 ORTHO05D006831 1.1e-25 120.9 175 46.3
Rhsim08G0103800 Rhododendron simsii HOM05D002009 ORTHO05D016985 1.1e-25 120.9 187 41.2
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 1.9e-25 120.2 177 42.4
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 2.5e-25 119.8 176 43.2
EL10Ac4g09369 Beta vulgaris HOM05D002009 ORTHO05D006831 5.6e-25 118.6 174 40.8
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 7.3e-25 118.2 174 41.4
Sp5g22500 Schrenkiella parvula HOM05D002009 ORTHO05D006831 9.6e-25 117.9 178 41.0
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 1.6e-24 117.1 176 43.8
ClCG02G015610 Citrullus lanatus HOM05D002009 ORTHO05D006831 8.1e-24 114.8 180 43.3
CsaV3_2G006490 Cucumis sativus L. HOM05D002009 ORTHO05D006831 1.8e-23 113.6 174 42.5
AUR62000811 Chenopodium quinoa HOM05D002009 ORTHO05D006831 3.1e-23 112.8 173 39.3
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 3.1e-23 112.8 175 41.1
AT1G67500 Arabidopsis thaliana HOM05D002009 ORTHO05D006831 4.0e-23 112.5 174 40.2
MELO3C004237.2 Cucumis melo HOM05D002009 ORTHO05D006831 4.0e-23 112.5 176 42.6
HanXRQChr15g0469941 Helianthus annuus HOM05D002009 ORTHO05D006831 4.0e-23 112.5 174 38.5
Sed0001711 Sechium edule HOM05D002009 ORTHO05D006831 4.0e-23 112.5 175 44.0
AUR62005157 Chenopodium quinoa HOM05D002009 ORTHO05D006831 1.5e-22 110.5 174 40.8
Thhalv10017996m.g Eutrema salsugineum HOM05D002009 ORTHO05D006831 3.4e-22 109.4 176 39.2
BcaB03g15362 Brassica carinata HOM05D002009 ORTHO05D006831 4.4e-22 109.0 175 40.0
Lj9A93T20 Lonicera japonica HOM05D002009 ORTHO05D016985 5.8e-22 108.6 168 44.0
C06p38660 Brassica napus HOM05D002009 ORTHO05D006831 7.6e-22 108.2 174 38.5
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 7.6e-22 108.2 176 40.3
BolC6t38955H Brassica oleracea HOM05D002009 ORTHO05D006831 9.9e-22 107.8 174 38.5
AL2G26100 Arabidopsis lyrata HOM05D002009 ORTHO05D006831 2.9e-21 106.3 175 38.9
CARHR060080 Cardamine hirsuta HOM05D002009 ORTHO05D006831 8.4e-21 104.8 174 38.5
THA.LOC104823729 Tarenaya hassleriana HOM05D002009 ORTHO05D006831 1.4e-20 104.0 176 37.5
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 1.9e-20 103.6 206 34.5
BraA07t30876Z Brassica rapa HOM05D002009 ORTHO05D006831 2.4e-20 103.2 174 39.1
Carub.0002s1383 Capsella rubella HOM05D002009 ORTHO05D006831 2.4e-20 103.2 175 38.3
PSO170G1195 Papaver somniferum HOM05D002009 ORTHO05D006831 2.4e-20 103.2 201 36.8
Hund07076 Selenicereus undatus HOM05D002009 ORTHO05D006831 2.4e-20 103.2 174 40.2
Aqoxy2G03070 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 3.2e-20 102.8 209 36.4
Lsat_1_v5_gn_9_86800 Lactuca sativa HOM05D002009 ORTHO05D006831 3.2e-20 102.8 174 39.1
SGA_v2.0_scaffold80G25788 Striga asiatica HOM05D002009 ORTHO05D006831 3.2e-20 102.8 174 41.4
Rhsim06G0107400 Rhododendron simsii HOM05D002009 ORTHO05D006831 4.2e-20 102.4 142 43.0
ATR0706G256 Amborella trichopoda HOM05D002009 ORTHO05D006831 5.4e-20 102.1 208 35.6
Lj1g0026508 Lotus japonicus HOM05D002009 ORTHO05D006831 5.4e-20 102.1 174 40.8
A07p32520 Brassica napus HOM05D002009 ORTHO05D006831 9.3e-20 101.3 174 37.9
Glyma.03G237200 Glycine max HOM05D002009 ORTHO05D006831 1.0e-18 97.8 173 38.2
SHI18133 Sapria himalayana HOM05D002009 ORTHO05D006831 1.1e-17 94.4 174 36.8
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea HOM05D002009 ORTHO05D006831 7.3e-17 91.7 173 36.4
Lju1225A1G38 Lonicera japonica HOM05D002009 ORTHO05D016985 2.8e-16 89.7 69 71.0
VMungo0540G0763 Vigna mungo HOM05D002009 ORTHO05D006831 2.8e-16 89.7 171 37.4
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea HOM05D002009 ORTHO05D006831 3.6e-16 89.4 173 37.6
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 3.6e-16 89.4 174 36.2
TPR.G33207 Trifolium pratense HOM05D002009 ORTHO05D006831 3.6e-16 89.4 189 37.0
COL.COLO4_13444 Corchorus olitorius HOM05D002009 ORTHO05D006831 8.1e-16 88.2 130 40.8
Phvul.006G091300 Phaseolus vulgaris HOM05D002009 ORTHO05D006831 1.4e-15 87.4 171 36.3
Ah.04g160310 Amaranthus hybridus HOM05D002009 ORTHO05D006831 2.4e-15 86.7 176 37.5
Psat0s2197g0080 Pisum sativum HOM05D002009 ORTHO05D006831 3.1e-15 86.3 173 36.4
Zm00001eb330170 Zea mays HOM05D002009 ORTHO05D006831 4.0e-15 85.9 175 36.6
unitig_0.g2310 Utricularia gibba HOM05D002009 ORTHO05D006831 1.5e-14 84.0 202 35.6
HPP92_001324 Vanilla planifolia HOM05D002009 ORTHO05D006831 1.5e-14 84.0 176 34.1
Dinv03583 Davidia involucrata HOM05D003864 ORTHO05D016985 7.6e-14 81.6 41 87.8
Lalb_Chr18g0045671 Lupinus albus HOM05D002009 ORTHO05D006831 1.7e-13 80.5 174 37.4
MD05G1053600 Malus domestica HOM05D002009 ORTHO05D016985 7.1e-12 75.1 150 34.0
SEGI_14509 Sequoiadendron giganteum HOM05D002009 ORTHO05D006831 3.5e-11 72.8 253 25.7
Pp3c2_33440 Physcomitrium patens HOM05D002009 ORTHO05D006831 2.8e-08 63.2 248 27.8
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis HOM05D002009 ORTHO05D006831 3.7e-08 62.8 240 29.6
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 6.9e-07 58.5 174 28.2


User provided reference genes

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