Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 0.0e+00 3507.2 1805 100.0
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 0.0e+00 2984.1 1825 84.8
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 0.0e+00 2813.5 1836 80.1
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 0.0e+00 2800.8 1875 78.7
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 0.0e+00 2787.7 1855 79.0
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 0.0e+00 2774.2 1845 79.1
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 0.0e+00 2765.7 1840 79.2
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 0.0e+00 2751.9 1837 78.6
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 0.0e+00 2748.8 1842 79.2
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 0.0e+00 2740.3 1834 77.9
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 0.0e+00 2728.7 1824 79.2
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 0.0e+00 2728.0 1901 76.5
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 0.0e+00 2727.2 1789 79.8
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 0.0e+00 2717.6 1819 78.7
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 0.0e+00 2714.5 1834 78.0
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 0.0e+00 2714.1 1837 76.8
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 0.0e+00 2697.2 1817 78.3
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 0.0e+00 2683.7 1851 77.7
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 0.0e+00 2681.4 1830 77.2
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 0.0e+00 2680.2 1836 76.7
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 0.0e+00 2678.7 1834 77.1
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 0.0e+00 2676.0 1825 77.2
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 0.0e+00 2675.6 1841 77.0
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 0.0e+00 2672.1 1838 77.0
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 0.0e+00 2671.0 1835 77.3
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 0.0e+00 2658.6 1816 77.0
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 0.0e+00 2643.2 1871 75.5
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 0.0e+00 2641.3 1834 76.3
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 0.0e+00 2632.4 1837 75.8
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 0.0e+00 2630.1 1824 76.0
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 0.0e+00 2617.0 1814 76.4
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 0.0e+00 2612.4 1819 76.2
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 0.0e+00 2603.5 1819 76.0
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 0.0e+00 2593.1 1799 75.7
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 0.0e+00 2592.4 1837 74.9
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 0.0e+00 2585.8 1827 74.4
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 0.0e+00 2573.9 1833 73.5
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 0.0e+00 2567.7 1841 74.2
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 0.0e+00 2566.6 1834 73.8
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 0.0e+00 2564.6 1834 74.2
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 0.0e+00 2564.3 1832 73.5
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 0.0e+00 2563.9 1833 73.2
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 0.0e+00 2563.5 1841 74.2
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 0.0e+00 2560.0 1834 73.2
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 0.0e+00 2549.2 1841 74.1
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 0.0e+00 2535.8 1832 73.1
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 0.0e+00 2521.1 1900 71.2
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 0.0e+00 2520.0 1833 72.6
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 0.0e+00 2518.4 1833 73.0
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 0.0e+00 2508.8 1838 72.7
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 0.0e+00 2508.8 1841 73.2
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 0.0e+00 2499.9 1837 72.5
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 0.0e+00 2498.0 1833 71.8
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 0.0e+00 2489.5 1835 72.5
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 0.0e+00 2467.2 1832 72.3
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 0.0e+00 2466.4 1837 72.1
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 0.0e+00 2466.4 1837 72.1
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 0.0e+00 2463.7 1828 72.4
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 0.0e+00 2463.0 1832 71.6
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 0.0e+00 2455.6 1832 71.9
Sopen01g040990 Solanum pennellii HOM05D004252 ORTHO05D005101 0.0e+00 2428.7 1727 73.7
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 0.0e+00 2424.4 1819 71.4
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 0.0e+00 2419.0 1823 71.0
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 0.0e+00 2414.0 1815 70.9
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 0.0e+00 2405.9 1827 70.3
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 0.0e+00 2402.9 1834 70.1
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 0.0e+00 2402.1 1846 70.1
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 0.0e+00 2398.2 1821 71.3
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 0.0e+00 2389.0 1833 70.6
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 0.0e+00 2366.7 1831 70.1
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 0.0e+00 2365.9 1825 69.8
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 0.0e+00 2348.9 1824 68.9
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 0.0e+00 2338.5 1834 68.8
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 0.0e+00 2295.4 1830 68.2
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 0.0e+00 2259.6 1824 67.5
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 0.0e+00 2241.8 1818 67.6
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 0.0e+00 2223.0 1821 66.8
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 0.0e+00 2221.0 1760 68.2
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 0.0e+00 2192.5 1809 66.7
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 0.0e+00 2157.1 1834 65.5
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 0.0e+00 2150.9 1831 65.1
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 0.0e+00 2131.7 1816 64.8
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 0.0e+00 2128.6 1821 64.4
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 0.0e+00 2121.3 1832 65.6
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 0.0e+00 2120.1 1819 64.5
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 0.0e+00 2098.2 1816 63.8
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 0.0e+00 2093.2 1826 62.9
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 0.0e+00 2089.7 1870 61.5
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 0.0e+00 2067.4 1829 63.1
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 0.0e+00 2033.5 1807 62.7
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 0.0e+00 2023.8 1209 87.4
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 0.0e+00 1989.5 1814 61.9
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 0.0e+00 1986.8 1814 61.8
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 0.0e+00 1986.1 1814 61.7
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 0.0e+00 1975.7 1835 61.1
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 0.0e+00 1857.8 1373 72.8
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 0.0e+00 1857.8 1791 59.3
Oeu002657.3 Olea europaea HOM05D004252 ORTHO05D005101 0.0e+00 1827.8 1495 67.0
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 0.0e+00 1822.0 1842 56.1
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 0.0e+00 1801.2 1822 55.4
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 0.0e+00 1735.3 1342 69.2
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 0.0e+00 1735.3 1561 63.7
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 0.0e+00 1730.3 1333 69.3
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 0.0e+00 1716.4 1700 57.2
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 0.0e+00 1689.9 1298 69.2
Ah.06g192370 Amaranthus hybridus HOM05D004252 ORTHO05D005101 0.0e+00 1610.5 1361 65.5
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 0.0e+00 1517.3 1190 67.6
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 0.0e+00 1470.7 1796 50.4
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 0.0e+00 1358.6 1990 44.2
SGA_v2.0_scaffold172G38984 Striga asiatica HOM05D004252 ORTHO05D005101 0.0e+00 1298.1 1000 69.4
CARHR078990 Cardamine hirsuta HOM05D004252 ORTHO05D005101 0.0e+00 1297.7 1194 62.2
SEGI_19302 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 0.0e+00 1271.9 1367 54.9
CDE02G1705 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 0.0e+00 1242.3 1139 60.8
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 0.0e+00 1212.2 1835 42.9
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 0.0e+00 1204.1 1926 41.5
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 0.0e+00 1182.9 1928 40.8
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 0.0e+00 1180.6 1977 40.4
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 0.0e+00 1138.6 863 70.2
Oeu027473.1 Olea europaea HOM05D004252 ORTHO05D005101 4.7e-285 985.7 1372 46.1
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 3.5e-256 889.8 1467 40.6
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 6.4e-234 815.8 631 66.6
Cpa.g.sc2756.2 Carica papaya HOM05D004252 ORTHO05D005101 1.7e-231 807.7 521 80.2
CAN.G134.96 Capsicum annuum HOM05D004252 ORTHO05D005101 8.1e-221 772.3 481 82.1
arahy.Tifrunner.gnm1.ann1.8T8W7S Arachis hypogaea HOM05D004252 ORTHO05D005101 1.5e-203 714.9 597 65.3
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 9.6e-198 695.7 466 76.6
Aqoxy1G03371 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.9e-194 684.1 489 75.7
arahy.Tifrunner.gnm1.ann1.E2R4RP Arachis hypogaea HOM05D004252 ORTHO05D005101 4.5e-179 633.6 558 62.7
Atru.chr2.824 Acer truncatum HOM05D004252 ORTHO05D005101 3.3e-174 617.5 470 70.6
Atru.chr2.822 Acer truncatum HOM05D004252 ORTHO05D005101 2.2e-173 614.8 368 84.2
Dinv08152 Davidia involucrata HOM05D004252 ORTHO05D005101 4.1e-172 610.5 338 91.1
Oeu027472.1 Olea europaea HOM05D004252 ORTHO05D005101 8.5e-170 602.8 361 82.3
Cpa.g.c42029 Carica papaya HOM05D004252 ORTHO05D005101 2.5e-169 601.3 360 83.3
SHI18418 Sapria himalayana HOM05D004252 ORTHO05D005101 1.0e-167 595.9 611 55.6
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 4.5e-163 580.5 423 67.4
Os08g0333000 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 1.2e-136 492.7 371 70.6
Oeu021056.1 Olea europaea HOM05D004252 ORTHO05D005101 2.1e-136 491.9 323 74.3
arahy.Tifrunner.gnm1.ann1.82F4VT Arachis hypogaea HOM05D004252 ORTHO05D005101 3.6e-128 464.5 401 63.1
Atru.chr2.823 Acer truncatum HOM05D004252 ORTHO05D005101 1.9e-124 452.2 259 87.6
Cpa.g.sc2756.3 Carica papaya HOM05D004252 ORTHO05D005101 4.7e-120 437.6 441 59.6
Cpa.g.sc2756.1 Carica papaya HOM05D004252 ORTHO05D005101 1.6e-115 422.5 267 83.1
HanXRQChr01g0016721 Helianthus annuus HOM05D004252 ORTHO05D005101 3.5e-83 315.1 302 60.3
HanXRQChr13g0410791 Helianthus annuus HOM05D004252 ORTHO05D005101 3.5e-83 315.1 301 60.5
HanXRQChr10g0278361 Helianthus annuus HOM05D004252 ORTHO05D005101 2.5e-81 308.9 306 59.8
Atru.chr2.825 Acer truncatum HOM05D004252 ORTHO05D005101 7.0e-55 221.1 143 77.6
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 1.6e-51 209.9 144 75.7
Cpa.g.sc1346.1 Carica papaya HOM05D004252 ORTHO05D005101 1.1e-23 117.5 70 88.6
Sopen00g013550 Solanum pennellii HOM05D004252 ORTHO05D005101 1.6e-22 113.6 71 84.5
SEGI_18631 Sequoiadendron giganteum HOM05D000173 ORTHO05D006747 4.6e-22 112.1 118 52.5
CAN.G1116.5 Capsicum annuum HOM05D004252 ORTHO05D005101 2.5e-20 106.3 70 78.6
PRCOL_00001722 Prasinoderma coloniale HOM05D000936 ORTHO05D005107 1.2e-17 97.4 582 21.8
DCAR_027576 Daucus carota HOM05D004252 ORTHO05D005101 2.6e-17 96.3 95 58.9
SEGI_02854 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 3.2e-15 89.4 79 57.0
SEGI_17147 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 3.5e-14 85.9 66 66.7
MCO11G870 Micromonas commoda HOM05D004252 ORTHO05D005101 3.0e-13 82.8 204 28.4
Gohir.D03G054650 Gossypium hirsutum HOM05D004252 ORTHO05D005101 1.5e-12 80.5 39 84.6
Gohir.D01G110850 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.5e-12 79.7 34 97.1
Gohir.D04G023525 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.5e-12 79.7 34 97.1
Gohir.D10G142750 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.5e-12 79.7 34 97.1
Gohir.D12G169250 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.5e-12 79.7 34 97.1
Gorai.004G036500 Gossypium raimondii HOM05D004252 ORTHO05D005101 2.5e-12 79.7 34 97.1
Psat3g129120 Pisum sativum HOM05D004252 ORTHO05D005101 4.3e-12 79.0 70 54.3
Psat3g129080 Pisum sativum HOM05D004252 ORTHO05D005101 5.6e-12 78.6 70 54.3
Nn3g17882 Nelumbo nucifera HOM05D004252 ORTHO05D005101 5.8e-09 68.6 72 56.9
Pp3c15_3250 Physcomitrium patens HOM05D004252 ORTHO05D005101 6.4e-08 65.1 188 29.8
PGR031G0210 Punica granatum HOM05D004252 ORTHO05D005101 1.1e-07 64.3 37 83.8
Cre03.g190550 Chlamydomonas reinhardtii HOM05D004252 ORTHO05D005101 4.1e-07 62.4 187 29.4


User provided reference genes

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