Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20205 Davidia involucrata HOM05D000010 ORTHO05D000302 8.9e-119 430.3 212 100.0
Dinv14939 Davidia involucrata HOM05D000010 ORTHO05D000302 7.6e-62 241.1 204 67.2
CSS0038547 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 1.5e-57 226.9 215 62.3
Haze_09408 Corylus avellana HOM05D000010 ORTHO05D000302 1.5e-49 200.3 218 55.5
Hma1.2p1_1034F.1_g250400 Hydrangea macrophylla HOM05D000010 ORTHO05D000302 1.3e-45 187.2 206 57.8
TAR629G0724 Trochodendron aralioides HOM05D000010 ORTHO05D000302 1.3e-45 187.2 201 53.7
CiPaw.11G167600 Carya illinoinensis HOM05D000010 ORTHO05D000302 5.0e-45 185.3 228 52.6
TAR627G0697 Trochodendron aralioides HOM05D000010 ORTHO05D000302 6.5e-45 184.9 206 52.4
CiPaw.12G117100 Carya illinoinensis HOM05D000010 ORTHO05D000302 1.1e-44 184.1 221 52.9
Rhsim06G0202800 Rhododendron simsii HOM05D000010 ORTHO05D000302 3.6e-43 179.1 215 57.2
Cc05_g11720 Coffea canephora HOM05D000010 ORTHO05D000302 6.1e-43 178.3 229 53.3
Nn1g04206 Nelumbo nucifera HOM05D000010 ORTHO05D000302 7.4e-41 171.4 214 47.7
Actinidia18776 Actinidia chinensis HOM05D000010 ORTHO05D000302 1.3e-40 170.6 206 54.4
CsaV3_4G033430 Cucumis sativus L. HOM05D000010 ORTHO05D000302 1.3e-40 170.6 218 54.1
Eucgr.F01170 Eucalyptus grandis HOM05D000010 ORTHO05D000302 3.1e-39 166.0 214 50.9
GSVIVG01014287001 Vitis vinifera HOM05D000010 ORTHO05D000302 5.3e-39 165.2 217 48.8
Nn1g06441 Nelumbo nucifera HOM05D000010 ORTHO05D000302 2.6e-38 162.9 200 48.5
vmacro23191 Vaccinium macrocarpon HOM05D000010 ORTHO05D000302 3.5e-38 162.5 213 51.6
MELO3C025611.2 Cucumis melo HOM05D000010 ORTHO05D000302 1.0e-37 161.0 219 52.5
Potri.011G115400 Populus trichocarpa HOM05D000010 ORTHO05D000302 1.0e-37 161.0 229 48.9
Sabra11G0101100 Salix brachista HOM05D000010 ORTHO05D000302 6.5e-37 158.3 217 47.0
Thecc.07G097000 Theobroma cacao HOM05D000010 ORTHO05D000302 6.5e-37 158.3 225 48.4
DCAR_013122 Daucus carota HOM05D000010 ORTHO05D000302 1.1e-36 157.5 209 49.3
Glyma.12G226500 Glycine max HOM05D000010 ORTHO05D000302 7.2e-36 154.8 219 47.9
ClCG11G017790 Citrullus lanatus HOM05D000010 ORTHO05D000302 9.4e-36 154.5 226 48.7
Duzib268G1713 Durio zibethinus HOM05D000010 ORTHO05D000302 9.4e-36 154.5 225 46.7
Duzib213G0879 Durio zibethinus HOM05D000010 ORTHO05D000302 2.1e-35 153.3 226 46.5
Lsat_1_v5_gn_5_127660 Lactuca sativa HOM05D000010 ORTHO05D000302 2.1e-35 153.3 211 48.8
Prupe.4G175800 Prunus persica HOM05D000010 ORTHO05D000302 2.1e-35 153.3 218 48.6
Glyma.13G274300 Glycine max HOM05D000010 ORTHO05D000302 2.7e-35 152.9 219 47.5
MD11G1253500 Malus domestica HOM05D000010 ORTHO05D000302 2.7e-35 152.9 212 49.5
Duzib170G0951 Durio zibethinus HOM05D000010 ORTHO05D000302 3.6e-35 152.5 223 46.2
Phvul.005G074500 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 8.0e-35 151.4 220 47.7
VMungo1080G1217 Vigna mungo HOM05D000010 ORTHO05D000302 8.0e-35 151.4 218 47.7
Gohir.D11G298800 Gossypium hirsutum HOM05D000010 ORTHO05D000302 1.0e-34 151.0 221 45.2
Gohir.A01G061200 Gossypium hirsutum HOM05D000010 ORTHO05D000302 2.3e-34 149.8 224 46.0
Lalb_Chr01g0006621 Lupinus albus HOM05D000010 ORTHO05D000302 2.3e-34 149.8 217 48.4
TAR626G1367 Trochodendron aralioides HOM05D000010 ORTHO05D000302 2.3e-34 149.8 212 47.6
QL08p023902 Quercus lobata HOM05D000010 ORTHO05D000302 3.0e-34 149.4 232 49.1
Gorai.007G323900 Gossypium raimondii HOM05D000010 ORTHO05D000302 4.0e-34 149.1 221 44.8
Oeu051089.1 Olea europaea HOM05D000010 ORTHO05D000302 4.0e-34 149.1 209 46.9
Sed0010922 Sechium edule HOM05D000010 ORTHO05D000302 4.0e-34 149.1 221 47.1
Aqoxy4G00690 Aquilegia oxysepala HOM05D000010 ORTHO05D000302 6.7e-34 148.3 224 45.5
Lalb_Chr03g0030781 Lupinus albus HOM05D000010 ORTHO05D000302 6.7e-34 148.3 217 47.0
Gohir.A11G286000 Gossypium hirsutum HOM05D000010 ORTHO05D000302 1.1e-33 147.5 221 44.3
MBI07_g32659_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000302 1.1e-33 147.5 215 47.4
Gorai.002G067300 Gossypium raimondii HOM05D000010 ORTHO05D000302 2.0e-33 146.7 224 45.1
Manes.15G089700 Manihot esculenta HOM05D000010 ORTHO05D000302 4.4e-33 145.6 221 49.3
Migut.M00779 Erythranthe guttata HOM05D000010 ORTHO05D000302 5.7e-33 145.2 216 47.7
Gohir.D01G047700 Gossypium hirsutum HOM05D000010 ORTHO05D000302 5.7e-33 145.2 224 45.1
COL.COLO4_18017 Corchorus olitorius HOM05D000010 ORTHO05D000302 7.5e-33 144.8 229 45.0
Lalb_Chr19g0134051 Lupinus albus HOM05D000010 ORTHO05D000302 1.7e-32 143.7 217 47.9
SalBow8G2195 Salvia bowleyana HOM05D000010 ORTHO05D000302 2.2e-32 143.3 210 47.1
Lj3g0022117 Lotus japonicus HOM05D000010 ORTHO05D000302 4.8e-32 142.1 224 46.9
Medtr2g078700 Medicago truncatula HOM05D000010 ORTHO05D000302 4.8e-32 142.1 232 44.4
vmacro09522 Vaccinium macrocarpon HOM05D000010 ORTHO05D000302 4.8e-32 142.1 206 47.6
Gohir.A13G147100 Gossypium hirsutum HOM05D000010 ORTHO05D000302 8.2e-32 141.4 227 47.1
Lsat_1_v5_gn_7_104460 Lactuca sativa HOM05D000010 ORTHO05D000302 8.2e-32 141.4 214 47.2
Manes.03G105700 Manihot esculenta HOM05D000010 ORTHO05D000302 1.4e-31 140.6 216 47.2
TWI38G1761 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 1.8e-31 140.2 232 44.0
Gorai.013G171300 Gossypium raimondii HOM05D000010 ORTHO05D000302 3.1e-31 139.4 227 46.7
Lj1A838T32 Lonicera japonica HOM05D000010 ORTHO05D000302 4.1e-31 139.0 213 46.9
PGSC0003DMG400012403 Solanum tuberosum HOM05D000010 ORTHO05D000302 7.0e-31 138.3 220 44.1
Lalb_Chr07g0182901 Lupinus albus HOM05D019418 ORTHO05D000302 9.1e-31 137.9 213 44.6
Gohir.D13G152134 Gossypium hirsutum HOM05D000010 ORTHO05D000302 1.2e-30 137.5 219 46.1
ECA234G1102 Erigeron canadensis HOM05D000010 ORTHO05D000302 1.6e-30 137.1 215 46.5
Sopen07g031040 Solanum pennellii HOM05D000010 ORTHO05D000302 2.0e-30 136.7 222 44.1
Solyc07g062840.3 Solanum lycopersicum HOM05D000010 ORTHO05D000302 1.0e-29 134.4 221 43.9
Psat0s5198g0040 Pisum sativum HOM05D000010 ORTHO05D000302 3.8e-29 132.5 236 41.9
Nitab4.5_0002019g0060 Nicotiana tabacum HOM05D000010 ORTHO05D000302 5.0e-29 132.1 210 45.7
Phvul.011G160400 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 6.5e-29 131.7 222 41.4
Potri.001G396300 Populus trichocarpa HOM05D000010 ORTHO05D000302 8.5e-29 131.3 187 48.1
Cpa.g.sc131.88 Carica papaya HOM05D000010 ORTHO05D000302 1.1e-28 131.0 221 41.2
SGA_v2.0_scaffold73G24232 Striga asiatica HOM05D000010 ORTHO05D000302 2.5e-28 129.8 217 45.2
Lj1C839T8 Lonicera japonica HOM05D000010 ORTHO05D000302 4.2e-28 129.0 213 45.5
Peaxi162Scf00069g01832 Petunia axillaris HOM05D000010 ORTHO05D000302 9.4e-28 127.9 216 45.4
HanXRQChr03g0070611 Helianthus annuus HOM05D000010 ORTHO05D000302 1.4e-26 124.0 211 44.5
CANSAT35G0864 Cannabis sativa HOM05D000010 ORTHO05D000302 1.8e-26 123.6 236 41.1
TWI39G0113 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 1.8e-26 123.6 218 43.6
VMungo1127G1061 Vigna mungo HOM05D000010 ORTHO05D000302 1.8e-26 123.6 221 42.5
CAN.G162.35 Capsicum annuum HOM05D000010 ORTHO05D000302 4.0e-26 122.5 209 44.0
Sc03g0010210 Simmondsia chinensis HOM05D000010 ORTHO05D000302 4.0e-26 122.5 211 40.3
Sed0010071 Sechium edule HOM05D000010 ORTHO05D000302 5.2e-26 122.1 208 44.2
THA.LOC104811874 Tarenaya hassleriana HOM05D000010 ORTHO05D000302 6.8e-26 121.7 223 40.8
Sc16g0007190 Simmondsia chinensis HOM05D000010 ORTHO05D000302 1.2e-25 120.9 194 43.8
Atru.chr2.2406 Acer truncatum HOM05D000010 ORTHO05D000302 1.5e-25 120.6 237 41.8
Psat0s2051g0040 Pisum sativum HOM05D000010 ORTHO05D000302 9.8e-25 117.9 234 41.0
MBI06_g06469_MAGBIO Magnolia biondii HOM05D000658 ORTHO05D000826 2.2e-24 116.7 196 43.9
Nitab4.5_0002330g0090 Nicotiana tabacum HOM05D000010 ORTHO05D000302 2.2e-24 116.7 194 44.8
TPR.G7951 Trifolium pratense HOM05D019418 ORTHO05D000302 2.2e-24 116.7 228 39.5
Sabra16G0259500 Salix brachista HOM05D000010 ORTHO05D000302 2.8e-24 116.3 194 44.3
ECA236G2500 Erigeron canadensis HOM05D000010 ORTHO05D000302 3.7e-24 115.9 226 39.8
RcHm_v2.0_Chr5g0032661 Rosa chinensis HOM05D000010 ORTHO05D000302 4.8e-24 115.5 221 42.5
TWI38G0587 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 8.3e-24 114.8 222 42.3
Ciclev10008619m.g Citrus clementina HOM05D000010 ORTHO05D000302 5.9e-22 108.6 239 38.1
FAN25G2268 Fragaria x ananassa HOM05D000010 ORTHO05D000302 1.0e-21 107.8 226 41.6
SalBow7G4298 Salvia bowleyana HOM05D000010 ORTHO05D000302 2.9e-21 106.3 207 42.0
Hund22826 Selenicereus undatus HOM05D000010 ORTHO05D000302 1.1e-20 104.4 218 41.7
unitig_0.g2042 Utricularia gibba HOM05D000010 ORTHO05D000302 1.5e-20 104.0 212 38.2
FvH4_3g03540 Fragaria vesca HOM05D000010 ORTHO05D000302 1.9e-20 103.6 210 38.6
FvH4_3g19410 Fragaria vesca HOM05D000010 ORTHO05D000302 1.9e-20 103.6 227 40.5
FAN11G2656 Fragaria x ananassa HOM05D000010 ORTHO05D000302 1.9e-20 103.6 210 38.6
Peaxi162Scf00027g00145 Petunia axillaris HOM05D000010 ORTHO05D000302 2.5e-20 103.2 212 39.6
FAN21G2186 Fragaria x ananassa HOM05D000010 ORTHO05D000302 3.2e-20 102.8 222 40.5
Glyma.12G161700 Glycine max HOM05D000010 ORTHO05D000302 3.2e-20 102.8 227 36.6
FAN11G0934 Fragaria x ananassa HOM05D000010 ORTHO05D000302 4.2e-20 102.4 227 40.1
FAN16G2019 Fragaria x ananassa HOM05D000010 ORTHO05D000302 5.5e-20 102.1 226 40.7
unitig_747.g21577 Utricularia gibba HOM05D000010 ORTHO05D000302 1.6e-19 100.5 210 39.5
FAN21G0506 Fragaria x ananassa HOM05D000010 ORTHO05D000302 4.7e-19 99.0 210 37.6
Lj3g0019574 Lotus japonicus HOM05D000010 ORTHO05D000302 1.4e-18 97.4 236 37.3
AUR62019477 Chenopodium quinoa HOM05D000010 ORTHO05D000302 3.0e-18 96.3 257 36.6
Glyma.06G236000 Glycine max HOM05D000010 ORTHO05D000302 3.0e-18 96.3 233 34.8
AL8G29092 Arabidopsis lyrata HOM05D000010 ORTHO05D000302 7.5e-17 91.7 232 35.8
FAN05G0894 Fragaria x ananassa HOM05D000010 ORTHO05D000302 9.8e-17 91.3 185 43.2
HanXRQChr10g0302591 Helianthus annuus HOM05D000010 ORTHO05D000302 9.8e-17 91.3 203 37.9
FvH4_6g06070 Fragaria vesca HOM05D000010 ORTHO05D000302 1.3e-16 90.9 180 41.7
AT5G53950 Arabidopsis thaliana HOM05D000010 ORTHO05D000302 2.2e-16 90.1 239 35.6
MELO3C019401.2 Cucumis melo HOM05D000010 ORTHO05D000302 1.1e-15 87.8 183 43.2
PSO675G1353 Papaver somniferum HOM05D000010 ORTHO05D000302 1.4e-15 87.4 277 33.6
FvH4_3g03580 Fragaria vesca HOM05D000010 ORTHO05D000302 1.8e-15 87.0 183 38.8
FAN02G4122 Fragaria x ananassa HOM05D000010 ORTHO05D000302 1.8e-15 87.0 191 41.4
Atru.chr2.2405 Acer truncatum HOM05D000010 ORTHO05D000302 1.2e-14 84.3 171 43.3
PSO541G6265 Papaver somniferum HOM05D000010 ORTHO05D000302 2.0e-14 83.6 278 33.1
arahy.Tifrunner.gnm1.ann1.XB6K25 Arachis hypogaea HOM05D000010 ORTHO05D000302 3.5e-14 82.8 128 44.5
CsaV3_3G019530 Cucumis sativus L. HOM05D000010 ORTHO05D000302 3.5e-14 82.8 183 41.5
SHI21701 Sapria himalayana HOM05D000010 ORTHO05D000302 4.5e-14 82.4 201 34.3
arahy.Tifrunner.gnm1.ann1.B9XEKF Arachis hypogaea HOM05D000010 ORTHO05D000302 7.7e-14 81.6 128 43.8
Thhalv10013863m.g Eutrema salsugineum HOM05D000010 ORTHO05D000302 1.7e-13 80.5 228 35.1
PSO478G5307 Papaver somniferum HOM05D000010 ORTHO05D000302 1.7e-13 80.5 236 37.7
BcaB08g35748 Brassica carinata HOM05D000010 ORTHO05D000302 2.5e-12 76.6 232 33.6
Sed0027535 Sechium edule HOM05D000010 ORTHO05D000302 3.3e-12 76.3 174 41.4
Ah.04g164570 Amaranthus hybridus HOM05D000010 ORTHO05D000302 4.3e-12 75.9 237 33.8
DCAR_020996 Daucus carota HOM05D000010 ORTHO05D000302 4.3e-12 75.9 204 37.7
ClCG05G009250 Citrullus lanatus HOM05D000010 ORTHO05D000302 1.2e-11 74.3 183 39.9
Lalb_Chr20g0109531 Lupinus albus HOM05D000010 ORTHO05D000302 1.2e-11 74.3 216 33.3
Carub.0008s1426 Capsella rubella HOM05D000010 ORTHO05D000302 2.8e-11 73.2 238 33.6
BolC2t07909H Brassica oleracea HOM05D000010 ORTHO05D000302 3.6e-11 72.8 236 33.1
Sp6g16030 Schrenkiella parvula HOM05D000010 ORTHO05D000302 3.6e-11 72.8 229 33.2
EL10Ac4g08242 Beta vulgaris HOM05D000010 ORTHO05D000302 4.7e-11 72.4 263 33.8
A02p10670 Brassica napus HOM05D000010 ORTHO05D000302 8.0e-11 71.6 236 33.1
BraA02t06130Z Brassica rapa HOM05D000010 ORTHO05D000302 8.0e-11 71.6 236 33.1
CARHR267090 Cardamine hirsuta HOM05D000010 ORTHO05D000302 8.0e-11 71.6 240 34.2
ATR0730G026 Amborella trichopoda HOM05D000010 ORTHO05D000302 1.4e-10 70.9 221 33.5
BcaC04g20401 Brassica carinata HOM05D000010 ORTHO05D000302 4.0e-10 69.3 231 32.5
BolC9t57283H Brassica oleracea HOM05D000010 ORTHO05D000302 4.0e-10 69.3 231 32.5
PSO017G6648 Papaver somniferum HOM05D000010 ORTHO05D000302 4.0e-10 69.3 165 41.2
BcaC03g14365 Brassica carinata HOM05D000010 ORTHO05D000302 6.8e-10 68.6 229 33.2
C02p17800 Brassica napus HOM05D000010 ORTHO05D000302 6.8e-10 68.6 229 33.2
C09p44000 Brassica napus HOM05D000010 ORTHO05D000302 8.9e-10 68.2 229 31.9
A10p11320 Brassica napus HOM05D000010 ORTHO05D000302 1.2e-09 67.8 230 31.7
BraA10t43223Z Brassica rapa HOM05D000010 ORTHO05D000302 1.2e-09 67.8 230 31.7
BcaB05g22094 Brassica carinata HOM05D000010 ORTHO05D000302 2.6e-09 66.6 229 33.2
Aa31LG3G10010 Aethionema arabicum HOM05D000010 ORTHO05D000302 3.4e-09 66.2 212 33.5
Medtr6g059440 Medicago truncatula HOM05D019418 ORTHO05D000302 3.4e-09 66.2 145 37.2
vmacro11891 Vaccinium macrocarpon HOM05D000010 ORTHO05D000302 1.1e-07 61.2 37 70.3
Migut.H01960 Erythranthe guttata HOM05D000010 ORTHO05D000302 1.8e-07 60.5 215 32.6
AUR62036158 Chenopodium quinoa HOM05D000010 ORTHO05D000302 4.1e-07 59.3 189 36.5
SGA_v2.0_scaffold70G23688 Striga asiatica HOM05D000010 ORTHO05D000302 4.6e-06 55.8 147 32.7


User provided reference genes

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