Gene: Sopen07g031040

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g031040
  • Transcript Identifier Sopen07g031040.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 76516418-76518389 : positive

Gene Family Information

  • ID HOM05D000010
  • #Genes/#Species 9383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g031040.1

Descriptions

  • Description Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. | CUP-SHAPED COTYLEDON 2 (CUC2) | CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein | BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010014
ISO
PLAZA Integrative Orthologymeristem initiation AT3G15170
GO:0010223
ISO
PLAZA Integrative Orthologysecondary shoot formation AT5G53950
GO:0090709
ISO
PLAZA Integrative Orthologyregulation of timing of plant organ formation AT5G53950
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G53950
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G15170
GO:0051782
ISO
PLAZA Integrative Orthologynegative regulation of cell division AT3G15170
GO:0048467
ISO
PLAZA Integrative Orthologygynoecium development AT3G15170
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT3G15170
GO:0090691
ISO
PLAZA Integrative Orthologyformation of plant organ boundary AT5G53950
GO:0010072
ISO
PLAZA Integrative Orthologyprimary shoot apical meristem specification AT5G53950
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G15170
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity Solyc07g062840.3
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G53950
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os12g0123800
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G53950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036093 NAC domain superfamily
IPR003441 NAC domain
Mapman id Description
15.5.17 RNA biosynthesis.transcriptional regulation.transcription factor (NAC)