Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 2.9e-63 247.3 119 100.0
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.4e-54 218.4 119 86.6
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.5e-51 207.6 119 81.5
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.3e-51 206.8 119 81.5
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 2.1e-45 188.0 119 74.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 4.6e-45 186.8 119 73.9
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 7.8e-45 186.0 119 69.7
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.0e-44 184.1 119 69.7
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.5e-43 181.8 119 70.6
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 2.5e-43 181.0 119 69.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 5.6e-43 179.9 120 72.5
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 7.3e-43 179.5 119 70.6
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 7.3e-43 179.5 119 72.3
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 7.3e-43 179.5 112 72.3
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 1.2e-42 178.7 119 70.6
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 1.6e-42 178.3 119 68.1
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 3.6e-42 177.2 119 72.3
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 6.2e-42 176.4 119 68.1
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.8e-41 174.9 119 68.1
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 1.8e-41 174.9 117 70.9
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.8e-41 174.9 120 70.0
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 2.4e-41 174.5 119 68.1
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.2e-40 172.2 119 64.7
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.5e-40 171.8 119 66.4
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 65.5
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 68.9
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 5.8e-40 169.9 119 66.4
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 5.8e-40 169.9 119 68.9
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 7.6e-40 169.5 113 70.8
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 7.6e-40 169.5 121 70.2
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 9.9e-40 169.1 119 67.2
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 3.8e-39 167.2 113 69.0
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.8e-39 167.2 119 68.9
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.8e-39 167.2 119 68.9
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 3.8e-39 167.2 119 68.1
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 3.8e-39 167.2 117 66.7
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 3.8e-39 167.2 117 66.7
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 8.4e-39 166.0 119 68.9
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 8.4e-39 166.0 119 68.9
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.1e-38 165.6 119 63.9
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.1e-38 165.6 119 63.9
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 2.4e-38 164.5 119 63.9
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 4.2e-38 163.7 119 60.5
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 4.2e-38 163.7 119 60.5
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 4.2e-38 163.7 119 66.4
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.4e-38 163.3 119 67.2
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 7.1e-38 162.9 113 68.1
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.1e-38 162.9 120 66.7
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.1e-37 161.4 121 64.5
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 2.7e-37 161.0 121 62.8
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.5e-37 160.6 127 63.0
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 4.6e-37 160.2 120 62.5
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.7e-36 158.3 122 65.6
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.3e-36 157.9 123 64.2
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 3.9e-36 157.1 121 61.2
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 5.1e-36 156.8 113 65.5
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 6.6e-36 156.4 113 65.5
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 8.7e-36 156.0 121 62.0
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 8.7e-36 156.0 128 61.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.9e-35 154.8 113 61.9
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 3.3e-35 154.1 121 60.3
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 4.3e-35 153.7 119 62.2
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 7.3e-35 152.9 127 61.4
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 7.3e-35 152.9 127 61.4
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 9.6e-35 152.5 116 65.5
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.6e-34 151.8 127 59.1
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.4e-33 148.7 115 60.9
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 2.4e-33 147.9 125 60.0
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 3.1e-33 147.5 70 97.1
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.2e-32 145.6 118 57.6
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.0e-32 144.8 115 58.3
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 4.4e-32 143.7 122 58.2
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 4.4e-32 143.7 122 59.8
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 5.8e-32 143.3 124 55.6
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 4.9e-31 140.2 130 56.2
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 4.9e-31 140.2 102 64.7
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 2.7e-29 134.4 121 55.4
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 3.5e-29 134.0 123 52.8
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 2.3e-28 131.3 125 52.8
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 6.6e-28 129.8 125 56.0
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 7.3e-27 126.3 131 53.4
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 3.6e-26 124.0 132 53.0
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 4.8e-26 123.6 119 57.1
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 6.2e-26 123.2 134 50.7
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 8.1e-26 122.9 117 52.1
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 2.4e-25 121.3 127 53.5
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 3.1e-25 120.9 129 51.2
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 4.0e-25 120.6 132 52.3
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 5.3e-25 120.2 131 51.9
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.6e-24 117.9 70 71.4
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 2.9e-23 114.4 123 49.6
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 7.1e-22 109.8 129 49.6
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.5e-21 107.5 125 48.0
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 4.6e-21 107.1 122 48.4
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 4.6e-21 107.1 122 48.4
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.3e-20 104.8 121 47.1
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 3.0e-20 104.4 121 47.1
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 9.6e-19 99.4 95 53.7
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 5.3e-17 93.6 122 41.8
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 1.3e-15 89.0 119 42.0
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.3e-15 89.0 119 40.3
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 2.9e-15 87.8 96 46.9
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 1.8e-12 78.6 42 81.0
ECA240G0851 Erigeron canadensis HOM05D006918 ORTHO05D008525 1.9e-06 58.5 32 84.4
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 7.1e-06 56.6 34 76.5


User provided reference genes

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