Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17655 Davidia involucrata HOM05D005205 ORTHO05D006155 5.4e-169 597.8 359 100.0
Actinidia18451 Actinidia chinensis HOM05D005205 ORTHO05D006155 8.5e-122 441.0 257 86.0
CSS0028662 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 1.8e-119 433.3 260 84.2
CSS0009404 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 4.0e-119 432.2 260 83.8
Cc11_g00390 Coffea canephora HOM05D005205 ORTHO05D006155 1.4e-116 423.7 257 82.1
Lj3A844T51 Lonicera japonica HOM05D005205 ORTHO05D006155 2.0e-115 419.9 255 82.4
SGA_v2.0_scaffold34G13663 Striga asiatica HOM05D005205 ORTHO05D006155 2.0e-115 419.9 259 80.7
MSTRG.2087 Avicennia marina HOM05D005205 ORTHO05D006155 1.1e-113 414.1 257 82.1
TAR622G1118 Trochodendron aralioides HOM05D005205 ORTHO05D006155 5.5e-113 411.8 256 80.1
Ciclev10015886m.g Citrus clementina HOM05D005205 ORTHO05D006155 2.1e-112 409.8 252 81.0
Solyc02g049070.4 Solanum lycopersicum HOM05D005205 ORTHO05D006155 1.0e-111 407.5 247 82.6
Oeu006323.1 Olea europaea HOM05D005205 ORTHO05D006155 1.8e-111 406.8 261 78.9
CiPaw.16G000600 Carya illinoinensis HOM05D005205 ORTHO05D006155 3.0e-111 406.0 251 81.3
DCAR_023495 Daucus carota HOM05D005205 ORTHO05D006155 3.0e-111 406.0 251 81.3
TWI53G0012 Tripterygium wilfordii HOM05D005205 ORTHO05D006155 4.0e-111 405.6 252 77.8
Manes.04G160800 Manihot esculenta HOM05D005205 ORTHO05D006155 5.2e-111 405.2 261 78.2
MD16G1004900 Malus domestica HOM05D005205 ORTHO05D006155 6.8e-111 404.8 253 78.7
Thecc.02G152000 Theobroma cacao HOM05D005205 ORTHO05D006155 6.8e-111 404.8 251 80.5
Nitab4.5_0003034g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 8.8e-111 404.4 249 81.1
Potri.010G254800 Populus trichocarpa HOM05D005205 ORTHO05D006155 8.8e-111 404.4 264 77.7
Nn3g18536 Nelumbo nucifera HOM05D005205 ORTHO05D006155 1.5e-110 403.7 257 78.6
PGR044G0613 Punica granatum HOM05D005205 ORTHO05D006155 1.5e-110 403.7 248 80.2
Sopen02g008300 Solanum pennellii HOM05D005205 ORTHO05D006155 4.4e-110 402.1 245 82.0
Duzib248G0811 Durio zibethinus HOM05D005205 ORTHO05D006155 7.5e-110 401.4 251 80.1
COL.COLO4_33151 Corchorus olitorius HOM05D005205 ORTHO05D006155 1.3e-109 400.6 259 78.4
Gorai.005G213800 Gossypium raimondii HOM05D005205 ORTHO05D006155 1.3e-109 400.6 249 79.5
MBI03_g11900_MAGBIO Magnolia biondii HOM05D005205 ORTHO05D006155 2.2e-109 399.8 256 76.6
Gohir.D02G191000 Gossypium hirsutum HOM05D005205 ORTHO05D006155 2.8e-109 399.4 249 79.5
Nitab4.5_0000067g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 2.8e-109 399.4 249 80.7
Eucgr.J00330 Eucalyptus grandis HOM05D005205 ORTHO05D006155 4.8e-109 398.7 255 76.9
THA.LOC104800388 Tarenaya hassleriana HOM05D005205 ORTHO05D006155 4.8e-109 398.7 253 78.7
GSVIVG01034351001 Vitis vinifera HOM05D005205 ORTHO05D006155 6.3e-109 398.3 251 78.5
Gohir.A03G167900 Gossypium hirsutum HOM05D005205 ORTHO05D006155 8.3e-109 397.9 249 79.1
ClCG11G012770 Citrullus lanatus HOM05D005205 ORTHO05D006155 1.4e-108 397.1 255 78.0
MD13G1000800 Malus domestica HOM05D005205 ORTHO05D006155 1.4e-108 397.1 253 78.3
Prupe.1G351900 Prunus persica HOM05D005205 ORTHO05D006155 1.4e-108 397.1 249 77.5
Atru.chr11.38 Acer truncatum HOM05D005205 ORTHO05D006155 1.8e-108 396.7 249 77.1
Duzib052G0598 Durio zibethinus HOM05D005205 ORTHO05D006155 1.8e-108 396.7 256 78.1
Sc06g0007780 Simmondsia chinensis HOM05D005205 ORTHO05D006155 3.1e-108 396.0 250 79.6
Migut.E00589 Erythranthe guttata HOM05D005205 ORTHO05D006155 4.1e-108 395.6 259 76.4
Glyma.09G286000 Glycine max HOM05D005205 ORTHO05D006155 5.4e-108 395.2 250 77.6
Cfa018669 Carpinus fangiana HOM05D001610 ORTHO05D001585 7.0e-108 394.8 243 81.5
PSO782G4176 Papaver somniferum HOM05D005205 ORTHO05D006155 7.0e-108 394.8 257 76.7
RcHm_v2.0_Chr4g0447201 Rosa chinensis HOM05D005205 ORTHO05D006155 9.1e-108 394.4 251 77.7
FvH4_4g37340 Fragaria vesca HOM05D005205 ORTHO05D006155 1.6e-107 393.7 248 77.8
PSO063G1005 Papaver somniferum HOM05D005205 ORTHO05D006155 1.6e-107 393.7 257 76.3
Ca_12345_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 4.5e-107 392.1 249 77.5
Haze_17397 Corylus avellana HOM05D005205 ORTHO05D006155 5.9e-107 391.7 278 73.7
Sabra10G0198100 Salix brachista HOM05D005205 ORTHO05D006155 1.0e-106 391.0 255 78.0
MELO3C011767.2 Cucumis melo HOM05D005205 ORTHO05D006155 1.3e-106 390.6 252 76.6
Glyma.20G000300 Glycine max HOM05D005205 ORTHO05D006155 1.3e-106 390.6 252 75.4
QL01p000318 Quercus lobata HOM05D005205 ORTHO05D006155 1.3e-106 390.6 252 78.2
CANSAT78G1147 Cannabis sativa HOM05D005205 ORTHO05D006155 1.7e-106 390.2 250 77.6
Lalb_Chr04g0259081 Lupinus albus HOM05D005205 ORTHO05D006155 1.7e-106 390.2 252 77.4
FAN17G1859 Fragaria x ananassa HOM05D005205 ORTHO05D006155 2.9e-106 389.4 248 76.6
Aqoxy3G04336 Aquilegia oxysepala HOM05D005205 ORTHO05D006155 5.0e-106 388.7 250 77.6
arahy.Tifrunner.gnm1.ann1.JXP1KB Arachis hypogaea HOM05D005205 ORTHO05D006155 5.0e-106 388.7 255 76.9
Phvul.003G000300 Phaseolus vulgaris HOM05D005205 ORTHO05D006155 6.6e-106 388.3 249 77.1
arahy.Tifrunner.gnm1.ann1.LXEK1C Arachis hypogaea HOM05D005205 ORTHO05D006155 1.1e-105 387.5 255 76.5
FAN07G0818 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.5e-105 387.1 248 76.2
Sed0014845 Sechium edule HOM05D005205 ORTHO05D006155 2.5e-105 386.3 255 75.3
VMungo0251G0539 Vigna mungo HOM05D001906 ORTHO05D002083 2.5e-105 386.3 255 74.5
CsaV3_5G029150 Cucumis sativus L. HOM05D005205 ORTHO05D006155 5.5e-105 385.2 252 75.8
Lj2g0013395 Lotus japonicus HOM05D005205 ORTHO05D006155 5.5e-105 385.2 252 75.8
Oeu027937.2 Olea europaea HOM05D005205 ORTHO05D006155 7.2e-105 384.8 382 62.6
Sed0020094 Sechium edule HOM05D005205 ORTHO05D006155 6.1e-104 381.7 255 74.5
Ah.01g011460 Amaranthus hybridus HOM05D005205 ORTHO05D006155 1.5e-102 377.1 248 75.0
SalBow2G1531 Salvia bowleyana HOM05D005205 ORTHO05D006155 3.4e-102 375.9 262 74.0
HanXRQChr04g0099271 Helianthus annuus HOM05D005205 ORTHO05D006155 7.5e-102 374.8 253 74.7
Lalb_Chr10g0094691 Lupinus albus HOM05D005205 ORTHO05D006155 7.5e-102 374.8 249 75.1
ECA246G5176 Erigeron canadensis HOM05D005205 ORTHO05D006155 1.3e-101 374.0 252 73.4
AUR62017757 Chenopodium quinoa HOM05D005205 ORTHO05D006155 4.9e-101 372.1 250 74.0
unitig_27.g25294 Utricularia gibba HOM05D005205 ORTHO05D006155 4.9e-101 372.1 258 74.4
Cpa.g.sc221.15 Carica papaya HOM05D005205 ORTHO05D006155 6.3e-101 371.7 259 73.7
Aa31LG3G17990 Aethionema arabicum HOM05D005205 ORTHO05D006155 4.1e-100 369.0 249 74.3
AUR62032894 Chenopodium quinoa HOM05D005205 ORTHO05D006155 5.4e-100 368.6 250 73.6
Thhalv10013959m.g Eutrema salsugineum HOM05D005205 ORTHO05D006155 5.4e-100 368.6 251 73.3
ATR0124G008 Amborella trichopoda HOM05D005205 ORTHO05D006155 9.2e-100 367.9 249 71.9
AT5G08540 Arabidopsis thaliana HOM05D005205 ORTHO05D006155 1.2e-99 367.5 243 75.3
HanXRQChr06g0171581 Helianthus annuus HOM05D005205 ORTHO05D006155 1.2e-99 367.5 242 75.6
AL6G19250 Arabidopsis lyrata HOM05D005205 ORTHO05D006155 3.5e-99 365.9 244 75.8
BcaB08g37247 Brassica carinata HOM05D005205 ORTHO05D006155 5.9e-99 365.2 251 72.5
A10p28180 Brassica napus HOM05D005205 ORTHO05D006155 7.8e-99 364.8 254 72.0
C09p68390 Brassica napus HOM05D005205 ORTHO05D006155 7.8e-99 364.8 254 71.7
BolC9t59586H Brassica oleracea HOM05D005205 ORTHO05D006155 7.8e-99 364.8 254 71.7
BraA10t44867Z Brassica rapa HOM05D005205 ORTHO05D006155 7.8e-99 364.8 254 72.0
Carub.0006s0750 Capsella rubella HOM05D005205 ORTHO05D006155 7.8e-99 364.8 244 75.4
Sp6g34350 Schrenkiella parvula HOM05D005205 ORTHO05D006155 1.0e-98 364.4 259 71.8
CARHR204440 Cardamine hirsuta HOM05D005205 ORTHO05D006155 5.0e-98 362.1 243 74.9
EL10Ac9g23020 Beta vulgaris HOM05D005205 ORTHO05D006155 8.6e-98 361.3 252 72.2
Os04g0527800 Oryza sativa ssp. japonica HOM05D005205 ORTHO05D006155 3.1e-95 352.8 246 68.3
HPP92_007317 Vanilla planifolia HOM05D005205 ORTHO05D006155 2.6e-94 349.7 252 68.7
C03p04410 Brassica napus HOM05D005205 ORTHO05D006155 1.2e-91 340.9 252 68.3
BolC3t12972H Brassica oleracea HOM05D005205 ORTHO05D006155 6.0e-91 338.6 252 67.5
A03p03920 Brassica napus HOM05D005205 ORTHO05D006155 2.3e-90 336.7 250 67.6
BcaB01g05587 Brassica carinata HOM05D005205 ORTHO05D006155 1.5e-89 334.0 246 67.9
BraA03t09738Z Brassica rapa HOM05D005205 ORTHO05D006155 7.3e-89 331.6 250 66.8
Lsat_1_v5_gn_3_35240 Lactuca sativa HOM05D005205 ORTHO05D006155 1.3e-82 310.8 197 77.7
Medtr1g039490 Medicago truncatula HOM05D005205 ORTHO05D006155 4.3e-81 305.8 210 71.9
Peaxi162Scf00655g00330 Petunia axillaris HOM05D005205 ORTHO05D006155 1.4e-79 300.8 250 65.2
Zm00001eb076700 Zea mays HOM05D005205 ORTHO05D006155 3.2e-76 289.7 248 59.7
RcHm_v2.0_Chr6g0263291 Rosa chinensis HOM05D005205 ORTHO05D006155 1.5e-70 270.8 252 56.7
SMO367G0125 Selaginella moellendorffii HOM05D005205 ORTHO05D006155 2.7e-67 260.0 247 50.6
Pp3c3_33330 Physcomitrium patens HOM05D005205 ORTHO05D006155 6.0e-67 258.8 250 53.2
Mapoly0169s0014 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.7e-66 257.3 251 50.2
RcHm_v2.0_Chr1g0316621 Rosa chinensis HOM05D005205 ORTHO05D006155 2.0e-62 243.8 164 72.6
CBR_g39443 Chara braunii HOM05D005205 ORTHO05D006155 2.5e-57 226.9 241 50.2
CDE05G2447 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 7.3e-57 225.3 139 79.9
FAN28G1115 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.1e-52 211.5 165 66.1
Rhsim04G0130700 Rhododendron simsii HOM05D005205 ORTHO05D006155 2.1e-51 207.2 164 65.9
vmacro08834 Vaccinium macrocarpon HOM05D005205 ORTHO05D006155 4.6e-51 206.1 141 72.3
AagrBONN_evm.TU.Sc2ySwM_228.2354 Anthoceros agrestis HOM05D005205 ORTHO05D006155 7.9e-51 205.3 194 52.1
FAN03G0776 Fragaria x ananassa HOM05D005205 ORTHO05D006155 3.7e-48 196.4 186 58.1
Nn1g04118 Nelumbo nucifera HOM05D005205 ORTHO05D006155 9.0e-47 191.8 126 77.0
Hma1.2p1_3386F.1_g335770 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 1.7e-45 187.6 184 59.2
Ca_12346_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 1.8e-39 167.5 108 75.0
TPR.G30235 Trifolium pratense HOM05D005205 ORTHO05D006155 2.4e-39 167.2 165 57.6
Psat0s5832g0080 Pisum sativum HOM05D005205 ORTHO05D006155 1.7e-37 161.0 108 71.3
Hma1.2p1_3386F.1_g335780 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 1.9e-36 157.5 122 70.5
RcHm_v2.0_Chr4g0403031 Rosa chinensis HOM05D005205 ORTHO05D006155 9.3e-36 155.2 166 54.8
BcaB01g05586 Brassica carinata HOM05D005205 ORTHO05D006155 4.6e-35 152.9 113 68.1
FAN14G4394 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.8e-31 141.0 105 65.7
HanXRQChr01g0001451 Helianthus annuus HOM05D005205 ORTHO05D006155 5.9e-30 136.0 94 73.4
Nn7g36511 Nelumbo nucifera HOM05D005205 ORTHO05D006155 2.5e-28 130.6 74 87.8
SEGI_15080 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 2.5e-28 130.6 104 59.6
Cc00_g03890 Coffea canephora HOM05D005205 ORTHO05D006155 2.8e-24 117.1 91 65.9
CDE05G2109 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 6.3e-24 115.9 73 69.9
RcHm_v2.0_Chr3g0483731 Rosa chinensis HOM05D005205 ORTHO05D006155 1.5e-22 111.3 80 67.5
PRCOL_00005587 Prasinoderma coloniale HOM05D005205 ORTHO05D006155 4.5e-22 109.8 200 33.0
SEGI_28687 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 8.5e-21 105.5 82 64.6
RcHm_v2.0_Chr3g0483721 Rosa chinensis HOM05D005205 ORTHO05D006155 2.5e-20 104.0 80 62.5
FAN01G2591 Fragaria x ananassa HOM05D005205 ORTHO05D006155 7.9e-19 99.0 92 57.6
SHI21163 Sapria himalayana HOM05D005205 ORTHO05D006155 2.3e-18 97.4 80 56.2
Nn5g29101 Nelumbo nucifera HOM05D005205 ORTHO05D006155 3.3e-17 93.6 56 83.9
Mapoly0067s0101 Marchantia polymorpha HOM05D005205 ORTHO05D006155 2.2e-16 90.9 185 33.0
TPR.G15012 Trifolium pratense HOM05D005205 ORTHO05D006155 2.8e-16 90.5 56 78.6
SHI21160 Sapria himalayana HOM05D005205 ORTHO05D006155 3.7e-16 90.1 99 52.5
TPR.G39699 Trifolium pratense HOM05D005205 ORTHO05D006155 1.8e-15 87.8 50 80.0
Cre09.g402950 Chlamydomonas reinhardtii HOM05D005205 ORTHO05D006155 4.1e-15 86.7 228 28.1
Mapoly0067s0102 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.1e-12 78.6 147 34.0
Mapoly0067s0100 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.5e-12 78.2 147 35.4
Sabra08G0000800 Salix brachista HOM05D005205 ORTHO05D006155 4.7e-11 73.2 69 55.1
MBI16_g05633_MAGBIO Magnolia biondii HOM05D000869 ORTHO05D000685 2.0e-09 67.8 59 45.8
Psat5g249280 Pisum sativum HOM05D005205 ORTHO05D006155 4.4e-09 66.6 46 73.9
SHI21161 Sapria himalayana HOM05D005205 ORTHO05D006155 3.7e-08 63.5 39 69.2


User provided reference genes

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