Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.3e-171 606.3 310 100.0
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.2e-136 488.0 310 81.9
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 2.0e-135 486.1 312 81.4
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 6.0e-132 474.6 312 77.9
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 5.1e-131 471.5 312 78.8
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 3.4e-127 458.8 311 76.8
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 4.5e-127 458.4 312 75.3
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.9e-126 455.7 311 73.0
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.9e-126 454.9 312 74.7
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.4e-125 453.4 312 74.4
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.5e-124 448.7 312 74.4
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.1e-122 443.7 312 74.0
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 2.5e-122 442.6 312 74.0
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 7.4e-122 441.0 310 73.2
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 6.2e-121 438.0 312 76.3
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 6.2e-121 438.0 311 74.0
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.1e-120 437.2 310 73.2
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 9.0e-120 434.1 311 73.3
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 9.0e-120 434.1 311 73.0
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.6e-119 432.6 311 73.0
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 5.8e-119 431.4 313 71.6
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 5.8e-119 431.4 312 72.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 7.6e-119 431.0 311 72.0
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.3e-118 430.3 311 71.1
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.3e-118 430.3 312 72.8
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.2e-118 429.5 312 71.5
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 6.4e-118 427.9 312 72.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 8.4e-118 427.6 310 73.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.1e-117 427.2 310 69.4
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.4e-117 426.8 313 72.2
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 4.2e-117 425.2 312 69.2
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 7.1e-117 424.5 310 69.4
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 6.0e-116 421.4 314 71.3
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 6.0e-116 421.4 314 70.4
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 6.0e-116 421.4 310 70.3
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 7.9e-116 421.0 314 70.4
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.3e-115 420.2 304 72.7
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 8.7e-115 417.5 311 67.5
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 3.3e-114 415.6 311 71.7
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 7.4e-114 414.5 312 68.6
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 7.4e-114 414.5 310 70.6
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 2.1e-113 412.9 310 71.0
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.8e-113 412.5 310 71.3
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 3.7e-113 412.1 312 68.3
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 4.8e-113 411.8 312 67.9
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.8e-113 411.8 298 74.5
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 8.2e-113 411.0 308 70.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.0e-112 407.5 298 73.8
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.0e-112 407.5 298 73.8
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.0e-112 407.5 298 73.8
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.8e-111 404.8 314 66.9
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.2e-110 402.9 310 69.0
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.9e-110 402.5 310 68.4
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 3.8e-110 402.1 310 68.4
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-109 399.4 315 69.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 9.3e-109 397.5 338 64.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.1e-108 396.4 311 67.5
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 2.1e-108 396.4 312 65.7
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.0e-107 394.0 310 66.5
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.3e-107 393.7 287 72.5
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 2.3e-107 392.9 312 64.7
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 2.3e-107 392.9 312 66.7
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 5.1e-107 391.7 311 67.5
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 6.7e-107 391.3 327 66.4
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-106 390.2 322 67.7
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-106 389.4 324 67.3
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 4.3e-106 388.7 312 68.6
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 4.8e-105 385.2 312 65.7
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 4.8e-105 385.2 312 67.0
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 8.2e-105 384.4 311 63.0
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 8.2e-105 384.4 337 63.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.4e-104 383.6 310 64.8
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 3.8e-102 375.6 289 67.1
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.1e-101 374.0 286 67.5
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 5.5e-101 371.7 310 61.9
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.2e-100 370.5 310 63.9
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 3.6e-100 369.0 310 65.2
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.3e-99 367.1 310 63.9
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 6.7e-99 364.8 264 73.1
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.1e-98 364.0 310 62.6
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.5e-98 363.6 331 58.3
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 3.3e-98 362.5 316 64.6
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.7e-97 360.1 361 56.5
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 6.3e-97 358.2 305 63.0
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 6.3e-97 358.2 288 63.5
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.4e-95 352.4 311 60.8
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 4.5e-95 352.1 313 60.1
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 2.9e-94 349.4 312 60.9
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 3.8e-94 349.0 310 57.7
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 6.5e-94 348.2 250 72.0
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 3.2e-93 345.9 310 59.4
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 2.7e-92 342.8 260 68.8
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 1.5e-90 337.0 327 56.6
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 5.7e-90 335.1 312 55.1
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.7e-89 333.6 312 58.7
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 1.7e-89 333.6 296 63.5
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 1.2e-87 327.4 285 66.0
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.2e-86 323.2 312 55.1
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.2e-77 292.7 264 61.4
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.6e-76 289.3 272 61.0
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 9.7e-74 281.2 310 46.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 2.2e-73 280.0 361 41.8
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.3e-72 275.4 260 58.5
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 5.9e-71 271.9 336 45.5
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 3.0e-51 206.5 121 86.0
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 7.5e-50 201.8 122 80.3
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.1e-45 188.0 138 69.6
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 7.0e-40 168.7 496 28.4
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.8e-36 156.8 177 48.0
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.0e-30 138.3 206 41.3
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.9e-25 119.4 123 52.8
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-24 118.2 160 42.5
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 9.9e-10 68.6 47 68.1
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 1.7e-09 67.8 59 61.0


User provided reference genes

Program Settings