Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.1e-116 423.3 217 100.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.5e-36 157.1 88 83.0
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 9.6e-36 154.5 88 80.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 2.1e-35 153.3 88 81.8
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 2.8e-35 152.9 88 78.4
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 3.7e-35 152.5 82 85.4
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 6.2e-35 151.8 88 80.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 6.2e-35 151.8 88 78.4
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 8.1e-35 151.4 88 77.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 8.1e-35 151.4 87 78.2
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.4e-34 150.6 91 80.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.4e-34 150.6 87 78.2
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.8e-34 150.2 91 73.6
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 2.4e-34 149.8 88 78.4
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.4e-34 149.8 90 75.6
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.4e-34 149.8 88 77.3
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.4e-34 149.8 88 77.3
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 3.1e-34 149.4 81 84.0
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 3.1e-34 149.4 88 77.3
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 6.9e-34 148.3 91 73.6
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 9.0e-34 147.9 88 76.1
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 9.0e-34 147.9 88 77.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.2e-33 147.5 88 78.4
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.2e-33 147.5 88 79.5
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.5e-33 147.1 88 76.1
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.5e-33 147.1 88 76.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.5e-33 147.1 88 76.1
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 4.5e-33 145.6 88 76.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.5e-33 145.6 88 76.1
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.5e-33 145.6 88 75.0
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.5e-33 145.6 88 75.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.6e-33 144.8 81 82.7
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.6e-33 144.8 81 82.7
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.0e-32 144.4 91 72.5
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.0e-32 144.4 91 72.5
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.7e-32 143.7 88 76.1
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.7e-32 143.7 88 72.7
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.2e-32 143.3 88 72.7
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 2.9e-32 142.9 88 73.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.9e-32 142.9 81 82.7
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.9e-32 142.9 88 73.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.9e-32 142.9 88 73.9
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.8e-32 142.5 88 73.9
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.9e-32 142.1 88 72.7
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.9e-32 142.1 88 72.7
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 6.5e-32 141.7 88 71.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 8.4e-32 141.4 87 74.7
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 8.4e-32 141.4 87 73.6
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 8.4e-32 141.4 88 71.6
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.1e-31 141.0 88 73.9
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.1e-31 141.0 87 72.4
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.9e-31 140.2 88 70.5
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.9e-31 140.2 88 71.6
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.5e-31 139.8 91 70.3
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.5e-31 139.8 88 75.0
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 4.2e-31 139.0 88 71.6
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.5e-31 138.7 87 72.4
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 5.5e-31 138.7 87 72.4
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 5.5e-31 138.7 87 72.4
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.5e-31 138.7 88 72.7
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.5e-31 138.7 88 72.7
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 7.1e-31 138.3 81 77.8
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 7.1e-31 138.3 88 71.6
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 7.1e-31 138.3 88 69.3
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 7.1e-31 138.3 88 69.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 9.3e-31 137.9 88 72.7
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.2e-30 137.5 87 70.1
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.1e-30 136.7 87 70.1
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.1e-30 136.7 87 72.4
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.1e-30 136.7 87 72.4
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.1e-30 136.7 88 70.5
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.1e-30 136.7 88 70.5
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 2.1e-30 136.7 88 72.7
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.7e-30 136.3 88 71.6
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 3.5e-30 136.0 87 70.1
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.5e-30 136.0 84 70.2
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 3.5e-30 136.0 87 72.4
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.5e-30 136.0 87 70.1
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.6e-30 135.6 146 49.3
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 4.6e-30 135.6 81 77.8
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.6e-30 135.6 88 70.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 6.0e-30 135.2 88 70.5
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.0e-29 134.4 88 68.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.0e-29 134.4 116 56.9
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-29 134.0 87 69.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-29 134.0 87 69.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.3e-29 134.0 87 69.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.3e-29 134.0 87 66.7
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.3e-29 134.0 88 70.5
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.3e-29 134.0 88 69.3
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 2.3e-29 133.3 88 68.2
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 5.1e-29 132.1 88 68.2
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.7e-29 131.7 88 68.2
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 8.7e-29 131.3 88 68.2
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 5.7e-28 128.6 87 66.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.1e-27 126.7 85 70.6
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.7e-27 125.9 88 63.6
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 4.8e-27 125.6 89 66.3
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.1e-26 124.4 88 62.5
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 1.1e-26 124.4 88 64.8
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 3.1e-26 122.9 88 62.5
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 3.1e-26 122.9 88 61.4
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 4.1e-26 122.5 89 65.2
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 5.3e-26 122.1 88 62.5
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.0e-25 120.2 88 65.9
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 2.0e-25 120.2 88 65.9
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 5.9e-25 118.6 88 63.6
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 6.1e-22 108.6 93 53.8
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.3e-21 107.5 91 56.0
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 6.7e-21 105.1 91 51.6
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 7.4e-20 101.7 93 51.6
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.6e-19 100.5 92 51.1
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 6.3e-19 98.6 91 52.7
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.1e-18 95.9 76 59.2
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 3.7e-11 72.8 75 48.0
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.4e-10 70.9 53 64.2
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.0e-09 67.0 89 39.3
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 5.0e-08 62.4 77 41.6
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.1e-06 57.0 50 52.0


User provided reference genes

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