Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 2.0e-214 748.8 379 100.0
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 1.9e-212 742.3 379 98.9
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.0e-173 613.6 379 82.8
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 5.8e-153 544.7 374 72.5
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 8.6e-149 530.8 388 70.6
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.5e-148 530.0 353 72.5
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 5.2e-146 521.5 379 72.6
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 6.8e-146 521.2 374 70.6
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 2.0e-145 519.6 386 68.9
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 2.6e-145 519.2 384 68.0
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 4.4e-145 518.5 382 67.0
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 5.8e-145 518.1 364 71.2
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 5.8e-145 518.1 376 70.2
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 4.9e-144 515.0 364 70.3
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 6.4e-144 514.6 363 70.2
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 8.4e-144 514.2 375 67.7
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.2e-142 510.4 374 69.5
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 1.6e-142 510.0 357 70.3
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 5.1e-141 505.0 362 72.7
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 5.1e-141 505.0 384 67.7
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 5.1e-141 505.0 360 72.5
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 4.3e-140 501.9 364 70.6
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 1.6e-139 500.0 372 69.4
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 2.8e-139 499.2 363 68.3
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 3.6e-139 498.8 364 67.6
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 8.1e-139 497.7 364 68.7
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 1.1e-138 497.3 363 68.0
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 1.1e-138 497.3 392 65.8
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 3.1e-138 495.7 360 68.6
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 3.1e-138 495.7 365 70.4
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 2.0e-137 493.0 382 64.7
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 4.4e-137 491.9 354 69.2
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 4.4e-137 491.9 363 69.7
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 7.6e-137 491.1 342 70.2
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 9.9e-137 490.7 360 69.7
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 1.7e-136 490.0 385 64.7
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 1.7e-136 490.0 380 64.7
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 8.4e-136 487.6 354 70.1
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.1e-135 487.3 362 69.1
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 1.1e-135 487.3 357 69.5
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 1.1e-135 487.3 347 70.3
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.9e-135 486.5 358 69.6
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 3.2e-135 485.7 378 65.1
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 5.4e-135 485.0 362 68.2
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 5.4e-135 485.0 364 67.3
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 9.3e-135 484.2 357 68.9
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 1.6e-134 483.4 362 68.0
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 1.6e-134 483.4 357 67.8
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 2.7e-134 482.6 362 68.2
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 3.5e-134 482.3 355 69.3
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 3.5e-134 482.3 341 70.1
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 7.8e-134 481.1 388 61.9
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 1.0e-133 480.7 356 68.5
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 1.7e-133 479.9 356 67.7
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 5.1e-133 478.4 352 67.9
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 1.1e-132 477.2 360 67.2
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.9e-132 476.5 363 65.0
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 3.3e-132 475.7 380 65.3
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 2.1e-131 473.0 363 68.9
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 4.8e-131 471.9 376 68.6
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 3.1e-130 469.2 358 67.9
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 1.2e-129 467.2 354 64.4
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 1.2e-129 467.2 354 63.8
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 1.2e-129 467.2 374 62.3
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 1.5e-129 466.8 374 62.3
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 3.4e-129 465.7 354 64.4
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 3.4e-129 465.7 355 65.1
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 5.8e-129 464.9 382 63.1
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 3.8e-128 462.2 354 62.7
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 6.4e-128 461.5 354 63.6
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 8.4e-128 461.1 381 61.7
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 8.4e-128 461.1 369 62.3
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 4.2e-127 458.8 383 60.3
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 1.3e-125 453.8 384 59.1
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 3.9e-125 452.2 375 61.1
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 3.9e-125 452.2 376 60.9
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 5.1e-125 451.8 353 66.0
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 2.5e-124 449.5 356 63.2
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 4.3e-124 448.7 356 62.9
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 4.3e-124 448.7 356 62.9
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 4.3e-124 448.7 362 63.5
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 9.6e-124 447.6 368 65.2
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 4.8e-123 445.3 368 61.1
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 8.1e-123 444.5 344 70.9
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 1.1e-122 444.1 359 64.3
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 1.7e-120 436.8 363 60.3
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 2.1e-118 429.9 342 62.3
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 1.8e-117 426.8 363 60.6
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 7.4e-116 421.4 342 61.1
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 2.0e-113 413.3 362 59.9
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 2.6e-113 412.9 314 65.9
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 2.2e-112 409.8 335 60.6
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 2.3e-109 399.8 375 57.3
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 3.3e-108 396.0 381 56.4
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 2.4e-106 389.8 478 46.2
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 3.4e-105 386.0 387 55.0
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 4.5e-97 359.0 377 53.6
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 1.1e-95 354.4 376 53.2
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.2e-94 350.9 305 58.7
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 4.1e-82 309.3 564 34.6
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 9.1e-82 308.1 356 48.9
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 1.0e-72 278.1 404 39.6
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 2.9e-72 276.6 435 37.7
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 5.0e-72 275.8 206 65.0
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 1.5e-71 274.2 350 41.7
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 5.5e-71 272.3 340 47.6
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.7e-70 269.2 406 37.7
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.6e-68 263.5 406 37.2
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 5.4e-66 255.8 266 52.3
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 8.6e-64 248.4 162 72.8
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 3.6e-62 243.0 156 75.0
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.0e-61 240.0 382 34.3
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 5.2e-61 239.2 146 78.8
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.4e-60 236.5 382 34.3
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 7.5e-52 208.8 176 59.7
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 2.7e-49 200.3 117 81.2
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 2.3e-40 170.6 105 81.9
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 8.9e-37 158.7 249 38.2
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.0e-32 145.2 130 59.2
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.1e-22 110.9 143 41.3
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 3.5e-17 93.6 278 30.2
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 5.1e-16 89.7 75 64.0
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 2.5e-15 87.4 75 57.3
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 6.0e-09 66.2 80 45.0


User provided reference genes

Program Settings