Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 1.0e-126 457.2 325 100.0
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 3.4e-21 106.7 174 44.3
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 3.4e-21 106.7 256 37.5
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 2.7e-18 97.1 168 44.6
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 8.8e-17 92.0 205 39.0
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 2.0e-16 90.9 134 51.5
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 5.7e-16 89.4 140 46.4
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 7.4e-16 89.0 192 39.1
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 1.3e-15 88.2 139 47.5
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 1.3e-15 88.2 139 47.5
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 2.2e-15 87.4 216 38.4
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 2.8e-15 87.0 126 50.8
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 3.7e-15 86.7 140 45.0
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 1.1e-14 85.1 175 39.4
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 2.4e-14 84.0 140 44.3
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 3.1e-14 83.6 146 42.5
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 3.1e-14 83.6 173 43.4
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 4.1e-14 83.2 149 44.3
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 5.3e-14 82.8 144 45.1
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 7.0e-14 82.4 132 46.2
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 9.1e-14 82.0 158 43.7
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 9.1e-14 82.0 127 49.6
TAR626G0119 Trochodendron aralioides HOM05D008991 ORTHO05D038496 1.6e-13 81.3 124 46.0
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 7.7e-13 79.0 147 41.5
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 7.7e-13 79.0 162 42.0
SGA_v2.0_scaffold322G48604 Striga asiatica HOM05D008991 ORTHO05D010442 7.7e-13 79.0 315 34.3
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 1.3e-12 78.2 103 53.4
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 2.2e-12 77.4 146 41.8
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 2.2e-12 77.4 152 43.4
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 2.2e-12 77.4 184 38.0
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.5e-11 74.7 179 37.4
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 1.5e-11 74.7 149 45.6
DCAR_009769 Daucus carota HOM05D008991 ORTHO05D010442 7.2e-11 72.4 113 44.2
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 1.2e-10 71.6 195 39.0
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 1.6e-10 71.2 203 35.0
ECA233G2256 Erigeron canadensis HOM05D011296 ORTHO05D010442 2.1e-10 70.9 135 43.0
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 2.7e-10 70.5 168 40.5
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 3.6e-10 70.1 149 42.3
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 3.6e-10 70.1 101 51.5
Sc21g0003130 Simmondsia chinensis HOM05D011296 ORTHO05D013264 3.6e-10 70.1 187 33.2
PGSC0003DMG400019976 Solanum tuberosum HOM05D011296 ORTHO05D013264 3.6e-10 70.1 163 38.7
BcaNung03228 Brassica carinata HOM05D008991 ORTHO05D010442 4.7e-10 69.7 174 38.5
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 8.0e-10 68.9 169 39.1
Nitab4.5_0002674g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 2.3e-09 67.4 112 46.4
COL.COLO4_36295 Corchorus olitorius HOM05D020995 ORTHO05D010442 4.0e-09 66.6 188 34.6
CSS0010360 Camellia sinensis var. sinensis HOM05D053530 ORTHO05D010442 6.7e-09 65.9 461 39.7
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 8.8e-09 65.5 224 31.2
CANSAT64G0119 Cannabis sativa HOM05D008991 ORTHO05D010442 1.2e-08 65.1 200 34.5
Ciclev10014817m.g Citrus clementina HOM05D008991 ORTHO05D010442 1.2e-08 65.1 223 30.0
Eucgr.K01100 Eucalyptus grandis HOM05D020995 ORTHO05D010442 1.5e-08 64.7 310 27.7
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 2.6e-08 63.9 166 36.1
Peaxi162Scf00384g00512 Petunia axillaris HOM05D011296 ORTHO05D022206 3.3e-08 63.5 142 38.7
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 5.7e-08 62.8 247 29.1
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 1.3e-07 61.6 250 28.8
PSO541G0331 Papaver somniferum HOM05D065359 ORTHO05D050182 1.3e-07 61.6 256 27.7
SalBow7G0518 Salvia bowleyana HOM05D008991 ORTHO05D010442 1.3e-07 61.6 166 35.5
EL10Ac9g20880 Beta vulgaris HOM05D024247 ORTHO05D019537 3.7e-07 60.1 67 58.2
Lj1A689G19 Lonicera japonica HOM05D011296 ORTHO05D010442 3.7e-07 60.1 121 44.6
MBI06_g45388_MAGBIO Magnolia biondii HOM05D037798 ORTHO05D013264 3.7e-07 60.1 82 47.6
MD17G1233000 Malus domestica HOM05D015016 ORTHO05D016410 3.7e-07 60.1 97 46.4
Nn1g09059 Nelumbo nucifera HOM05D011296 ORTHO05D013264 2.4e-06 57.4 83 45.8
arahy.Tifrunner.gnm1.ann1.77K9F8 Arachis hypogaea HOM05D039677 ORTHO05D019822 5.3e-06 56.2 78 50.0
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 5.3e-06 56.2 195 32.8
Prupe.3G123300 Prunus persica HOM05D015016 ORTHO05D016410 7.0e-06 55.8 39 76.9
MBI06_g18002_MAGBIO Magnolia biondii HOM05D037798 ORTHO05D013264 9.1e-06 55.5 89 44.9
Medtr2g091170 Medicago truncatula HOM05D012920 ORTHO05D012188 9.1e-06 55.5 57 61.4


User provided reference genes

Program Settings